Viral OTU vOTU-060768

vOTU: vOTU-060768

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-060768
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00082 → vSUBFAM-00340 → vGENUS-05151 → vSUBGEN-14273 → vOTU-060768
Host Lineage	Bacteria → Verrucomicrobiota → Verrucomicrobiae → Verrucomicrobiales → Akkermansiaceae → Akkermansia → Akkermansia muciniphila_B
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-2068613
Biosample ID	N/A
Length	34,793 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	52
CDS Density	95.27%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
NCBIFam	UHGV-2068613_1	TIGR02675.1	N/A	N/A	tape measure protein	N/A
structural_annotation	UHGV-2068613_1	PF18654,TIGR00606,COG0268	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2068613_2	PF18404,MF_01520,TIGR03469,COG1442	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2068613_3	PF14594,TIGR01646,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2068613_9	PF21190,TIGR03511,COG4935	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2068613_10	521674.Plim_2126	102.0	3.1e-22	N/A	N/A
Pfam	UHGV-2068613_10	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-2068613_10	PF20911,MF_04133,NF041162,COG4397	N/A	N/A	N/A	N/A
PHROG	UHGV-2068613_11	phrog_328	62.8	4.2e-18	head maturation protease	head and packaging
UniRef90	UHGV-2068613_11	UniRef90_UPI001C023827	173.0	0	phage protease	N/A
eggNOG-mapper	UHGV-2068613_11	794903.OPIT5_08310	69.7	0.000000000387	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-2068613_11	PF10123	N/A	N/A	Mu-like prophage I protein	Mu-like_Pro
PHROG	UHGV-2068613_14	phrog_113	115.0	5.9e-34	portal protein	head and packaging
UniRef90	UHGV-2068613_14	UniRef90_A0A4Q5IVR1	850.0	0	N/A	N/A
eggNOG-mapper	UHGV-2068613_14	794903.OPIT5_08305	183.0	0	N/A	N/A
Pfam	UHGV-2068613_14	PF06074	N/A	N/A	N/A	DUF935
COG	UHGV-2068613_14	COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-2068613_15	phrog_315	43.3	0.0000000000025	endolysin	lysis
UniRef90	UHGV-2068613_15	UniRef90_A0A2N8HHC6	374.0	0	PG_binding_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-2068613_15	349741.Amuc_1360	344.0	0	Glycosyl hydrolase 108	N/A
Pfam	UHGV-2068613_15	PF09374	N/A	N/A	Predicted Peptidoglycan domain	PG_binding_3
COG	UHGV-2068613_15	COG3926	N/A	N/A	Lysozyme family protein	N/A
structural_annotation	UHGV-2068613_15	PF09374,NF040573,COG3926	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2068613_19	PF05587,PF03388,COG3506	N/A	N/A	N/A	N/A
PHROG	UHGV-2068613_20	phrog_2	84.3	1.2e-24	terminase large subunit	head and packaging
UniRef90	UHGV-2068613_20	UniRef90_A0A1C7PDG0	352.0	0	p-loop containing nucleoside triphosphate hydrolase	N/A
eggNOG-mapper	UHGV-2068613_20	411459.RUMOBE_01049	70.9	0.000000000345	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD	N/A
COG	UHGV-2068613_20	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-2068613_20	PF04466,PF20441,MF_04145,TIGR01547,COG4373	N/A	N/A	N/A	N/A
PHROG	UHGV-2068613_21	phrog_1482	123.1	1e-36	terminase small subunit	head and packaging
UniRef90	UHGV-2068613_21	UniRef90_A0A8I0N2P9	95.1	9.64e-22	Terminase small subunit protein	N/A
eggNOG-mapper	UHGV-2068613_21	521000.PROVRETT_06006	91.3	3.09e-21	N/A	N/A
Pfam	UHGV-2068613_21	PF20901	N/A	N/A	Bacteriophage Sf6, terminase small subunit-like	Sf6_terminase
UniRef90	UHGV-2068613_22	UniRef90_A0A4Q5IVQ1	549.0	0	ADPrib_exo_Tox domain-containing protein	N/A
KOfam	UHGV-2068613_24	K02314	383.7	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-2068613_24	phrog_19	276.5	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2068613_24	UniRef90_A0A8F1KFQ8	852.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-2068613_24	349741.Amuc_1377	419.0	0	DnaB-like helicase C terminal domain	N/A
Pfam	UHGV-2068613_24	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-2068613_24	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-2068613_24	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-2068613_24	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-2068613_25	phrog_5810	76.4	4.2e-22	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2068613_25	402626.Rpic_2326	128.0	7.8e-33	ROK family	N/A
COG	UHGV-2068613_25	COG3355	N/A	N/A	Predicted transcriptional regulator	N/A
structural_annotation	UHGV-2068613_25	PF01978,MF_01819,NF041413,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-2068613_26	phrog_631	160.7	0	N/A	unknown function
UniRef90	UHGV-2068613_26	UniRef90_UPI001D184C64	109.0	1.68e-26	adenylosuccinate synthase	N/A
eggNOG-mapper	UHGV-2068613_26	1206545.S6CFA4_9CAUD	108.0	3.52e-27	N/A	N/A
structural_annotation	UHGV-2068613_26	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
PHROG	UHGV-2068613_28	phrog_799	170.8	0	DNA methyltransferase	other
UniRef90	UHGV-2068613_28	UniRef90_A0A8F1HDK7	415.0	0	Class I SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-2068613_28	1231377.C426_1976	177.0	0	DNA restriction-modification system	N/A
COG	UHGV-2068613_28	COG0827	N/A	N/A	Adenine-specific DNA N6-methylase	N/A
structural_annotation	UHGV-2068613_28	PF03848,MF_00341,NF012219,COG1255	N/A	N/A	N/A	N/A
KOfam	UHGV-2068613_31	K01159	82.3	5.4e-24	ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]	N/A
PHROG	UHGV-2068613_31	phrog_159	130.9	5.6e-39	RuvC-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2068613_31	UniRef90_A0A2N8HIX1	349.0	0	Crossover junction endodeoxyribonuclease RuvC	N/A
eggNOG-mapper	UHGV-2068613_31	367299.JOEE01000001_gene1963	74.3	0.0000000000000298	N/A	N/A
Pfam	UHGV-2068613_31	PF02075	N/A	N/A	Crossover junction endodeoxyribonuclease RuvC	RuvC
structural_annotation	UHGV-2068613_31	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
KOfam	UHGV-2068613_32	K01143	53.7	0.000000000000003	exo; exodeoxyribonuclease (lambda-induced) [EC:3.1.11.3]	N/A
PHROG	UHGV-2068613_32	phrog_149	98.1	6.5e-29	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2068613_32	UniRef90_A0A2N8HIW0	458.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-2068613_32	1215343.B488_04690	65.1	0.000000000472	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-2068613_32	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
structural_annotation	UHGV-2068613_32	PF09588,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-2068613_33	K07455	116.9	2.8e-34	recT; recombination protein RecT	N/A
PHROG	UHGV-2068613_33	phrog_148	130.0	1.8e-38	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2068613_33	UniRef90_A0A8F1KRS7	546.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-2068613_33	548476.cauri_1962	59.3	0.00000027	RecT family	N/A
Pfam	UHGV-2068613_33	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-2068613_33	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-2068613_33	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-2068613_33	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-2068613_40	K01356	59.8	5.6e-17	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-2068613_40	phrog_4	52.1	0.000000000000012	transcriptional repressor	transcription regulation
UniRef90	UHGV-2068613_40	UniRef90_A0A2N8HBV9	405.0	0	Peptidase_S24 domain-containing protein	N/A
Pfam	UHGV-2068613_40	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-2068613_40	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
UniRef90	UHGV-2068613_42	UniRef90_A0A2N8HHC4	342.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-2068613_42	1408427.JADB01000010_gene1482	54.3	0.000000426	TM2 domain	N/A
Pfam	UHGV-2068613_42	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-2068613_42	COG2314	N/A	N/A	N/A	N/A
UniRef90	UHGV-2068613_43	UniRef90_UPI001C0102F6	64.3	0.000000000053	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-2068613_43	PF21291,TIGR00270,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-2068613_46	UniRef90_UPI001C016FFA	64.3	0.00000000000375	helix-turn-helix domain-containing protein	N/A
PHROG	UHGV-2068613_49	phrog_315	54.3	0.0000000000000013	endolysin	lysis
UniRef90	UHGV-2068613_49	UniRef90_A0A2N8HHC6	334.0	0	PG_binding_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-2068613_49	349741.Amuc_1360	317.0	0	Glycosyl hydrolase 108	N/A
Pfam	UHGV-2068613_49	PF09374	N/A	N/A	Predicted Peptidoglycan domain	PG_binding_3
COG	UHGV-2068613_49	COG3926	N/A	N/A	Lysozyme family protein	N/A
structural_annotation	UHGV-2068613_49	PF09374,NF040573,COG3926	N/A	N/A	N/A	N/A
UniRef90	UHGV-2068613_51	UniRef90_UPI001EDF593B	196.0	0	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2068613	Yes	34,793	55	100	1