Viral OTU vOTU-061012

vOTU: vOTU-061012

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-061012
Number of Genomes	4
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-00184 → vGENUS-00321 → vSUBGEN-07215 → vOTU-061012
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1342266
Biosample ID	SAMN00791927
Length	40,790 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	61
CDS Density	91.57%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1342266_2	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1342266_3	phrog_14030	137.4	8.60005e-41	N/A	unknown function
UniRef90	UHGV-1342266_3	UniRef90_A0A133ZYW3	153.0	8.86041e-42	Cell wall-binding repeat protein	N/A
eggNOG-mapper	UHGV-1342266_3	887325.HMPREF0381_0057	145.0	1.02e-39	Putative cell wall binding repeat	N/A
COG	UHGV-1342266_3	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
PHROG	UHGV-1342266_4	phrog_443	51.6	0.000000000000025	holin	lysis
UniRef90	UHGV-1342266_4	UniRef90_UPI001BB47E53	87.0	3.16e-21	holin	N/A
eggNOG-mapper	UHGV-1342266_4	1235797.C816_04172	83.2	1.6e-20	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1342266_4	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1342266_4	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-1342266_5	phrog_937	61.5	1.6e-17	hemolysin	other
eggNOG-mapper	UHGV-1342266_5	1519439.JPJG01000023_gene533	51.2	0.000000521	N/A	N/A
UniRef90	UHGV-1342266_6	UniRef90_A0A1C6H462	373.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1342266_6	1408437.JNJN01000060_gene452	375.0	0	heme binding	N/A
Pfam	UHGV-1342266_6	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
COG	UHGV-1342266_6	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
eggNOG-mapper	UHGV-1342266_7	1519439.JPJG01000011_gene53	110.0	4.21e-22	N/A	N/A
eggNOG-mapper	UHGV-1342266_8	693746.OBV_01600	66.6	0.00000000449	N/A	N/A
eggNOG-mapper	UHGV-1342266_9	1235797.C816_04174	141.0	5e-40	N/A	N/A
UniRef90	UHGV-1342266_11	UniRef90_UPI00051B4A1C	173.0	0	N/A	N/A
eggNOG-mapper	UHGV-1342266_11	1519439.JPJG01000060_gene1894	173.0	0	N/A	N/A
Pfam	UHGV-1342266_11	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1342266_11	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1342266_11	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1342266_12	411473.RUMCAL_00420	61.6	0.000000129	nuclear chromosome segregation	N/A
COG	UHGV-1342266_12	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1342266_13	phrog_156	135.0	3.5e-40	portal protein	head and packaging
eggNOG-mapper	UHGV-1342266_13	693746.OBV_01670	598.0	0	N/A	N/A
structural_annotation	UHGV-1342266_13	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1342266_15	phrog_5107	41.7	0.0000000000095	amidase	lysis
UniRef90	UHGV-1342266_15	UniRef90_A0A4D7ASB8	516.0	0	N/A	N/A
eggNOG-mapper	UHGV-1342266_15	693746.OBV_01680	506.0	0	N/A	N/A
structural_annotation	UHGV-1342266_15	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
PHROG	UHGV-1342266_16	phrog_422	154.7	0	major head protein	head and packaging
UniRef90	UHGV-1342266_16	UniRef90_A0A6A8VJ17	332.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1342266_16	1408437.JNJN01000001_gene1710	241.0	0	N/A	N/A
Pfam	UHGV-1342266_16	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-1342266_16	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1342266_17	755731.Clo1100_2435	66.6	0.000000000909	N/A	N/A
eggNOG-mapper	UHGV-1342266_18	693746.OBV_01730	74.3	0.00000000000000399	N/A	N/A
structural_annotation	UHGV-1342266_18	PF11650	N/A	N/A	N/A	N/A
KOfam	UHGV-1342266_19	K06909	141.3	8.29989e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1342266_19	phrog_979	120.6	2.9e-37	terminase large subunit	head and packaging
UniRef90	UHGV-1342266_19	UniRef90_G4KR97	546.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1342266_19	693746.OBV_01690	546.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-1342266_19	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1342266_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1342266_19	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1342266_23	1160721.RBI_I00206	52.0	0.000000518	N/A	N/A
eggNOG-mapper	UHGV-1342266_24	1235802.C823_02864	63.5	0.000000000000349	N/A	N/A
UniRef90	UHGV-1342266_25	UniRef90_A0A1Y3R5J8	48.5	0.0000042	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1342266_25	1160721.RBI_I00206	50.1	0.000000182	N/A	N/A
Pfam	UHGV-1342266_25	PF07764	N/A	N/A	Omega Transcriptional Repressor	Omega_Repress
structural_annotation	UHGV-1342266_25	PF10723	N/A	N/A	N/A	N/A
PHROG	UHGV-1342266_26	phrog_15863	159.9	0	N/A	unknown function
UniRef90	UHGV-1342266_26	UniRef90_A0A1Y3R3M0	234.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-1342266_26	693746.OBV_01780	171.0	0	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-1342266_26	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-1342266_28	PF17917	N/A	N/A	N/A	N/A
KOfam	UHGV-1342266_29	K01520	151.1	8.40779e-45	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1342266_29	phrog_135	137.0	8.99998e-41	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1342266_29	UniRef90_A0A3D3Y5Q7	249.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1342266_29	887929.HMP0721_1278	139.0	1.31e-40	dUTPase	N/A
Pfam	UHGV-1342266_29	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1342266_29	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1342266_29	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1342266_29	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
UniRef90	UHGV-1342266_31	UniRef90_A9U7U9	114.0	4.6e-26	Predicted protein (Fragment)	N/A
eggNOG-mapper	UHGV-1342266_31	1444310.JANV01000162_gene1216	117.0	1.49e-28	N/A	N/A
PHROG	UHGV-1342266_32	phrog_1770	58.9	1.1e-16	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1342266_32	536233.CLO_1822	155.0	0	N/A	N/A
structural_annotation	UHGV-1342266_32	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
UniRef90	UHGV-1342266_33	UniRef90_UPI0019D1E2CF	232.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1342266_33	742735.HMPREF9467_00909	174.0	0	N/A	N/A
structural_annotation	UHGV-1342266_33	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1342266_34	phrog_59	132.3	1.7e-39	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1342266_34	UniRef90_UPI000A715418	146.0	9.13002e-41	NUMOD4 motif-containing HNH endonuclease	N/A
eggNOG-mapper	UHGV-1342266_34	213777.R9R2C9_9CAUD	102.0	1.21e-24	HNH endonuclease	N/A
PADLOC	UHGV-1342266_34	HEase_00016	72.3	1.7e-20	homing endonuclease	RM
Pfam	UHGV-1342266_34	PF13392	N/A	N/A	HNH endonuclease	HNH_3
PHROG	UHGV-1342266_36	phrog_60	42.7	0.0000000000078	N/A	unknown function
UniRef90	UHGV-1342266_36	UniRef90_UPI000CECCE2D	53.1	0.00000272	N/A	N/A
Pfam	UHGV-1342266_36	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1342266_36	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1342266_37	phrog_9298	59.9	3.4e-17	radical SAM domain protein	other
UniRef90	UHGV-1342266_37	UniRef90_A0A841L4D7	306.0	0	Radical SAM superfamily enzyme YgiQ (UPF0313 family)	N/A
eggNOG-mapper	UHGV-1342266_37	742738.HMPREF9460_03770	288.0	0	radical SAM domain protein	N/A
COG	UHGV-1342266_37	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1342266_37	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A
PHROG	UHGV-1342266_40	phrog_15768	48.7	0.00000000000013	N/A	unknown function
UniRef90	UHGV-1342266_40	UniRef90_A0A7C1PUJ6	101.0	7.42e-23	N/A	N/A
COG	UHGV-1342266_40	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1342266_40	PF07120,COG3756	N/A	N/A	N/A	N/A
KOfam	UHGV-1342266_41	K03111	131.3	1.1e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1342266_41	phrog_44	133.9	1.1e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1342266_41	UniRef90_UPI001C02B0E9	183.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1342266_41	445972.ANACOL_00151	169.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1342266_41	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1342266_41	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1342266_41	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1342266_41	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1342266_41	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1342266_43	phrog_7370	58.2	1.3e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1342266_43	UniRef90_A0A3D1LDS4	149.0	7.00649e-45	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1342266_43	1232449.BAHV02000016_gene1841	80.9	1.51e-18	HNH nucleases	N/A
Pfam	UHGV-1342266_43	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-1342266_44	phrog_72	75.4	6.5e-22	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1342266_44	UniRef90_A0A8D9PDS2	160.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1342266_44	445972.ANACOL_01825	162.0	0	N/A	N/A
Pfam	UHGV-1342266_44	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-1342266_44	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1342266_45	phrog_155	158.6	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1342266_45	UniRef90_UPI00130EB09C	194.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1342266_45	748224.HMPREF9436_03360	176.0	0	ERF superfamily	N/A
Pfam	UHGV-1342266_45	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1342266_45	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1342266_48	phrog_4973	71.2	1.3e-20	N/A	unknown function
UniRef90	UHGV-1342266_48	UniRef90_A0A3D3Y0P8	80.5	2.2e-18	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1342266_48	1072685.IX83_07155	60.1	0.0000000000301	Helix-turn-helix domain	N/A
Pfam	UHGV-1342266_48	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1342266_48	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1342266_50	760568.Desku_0919	109.0	4.26e-27	N/A	N/A
structural_annotation	UHGV-1342266_50	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-1342266_51	phrog_1468	52.1	0.0000000000000064	transcriptional repressor	transcription regulation
UniRef90	UHGV-1342266_51	UniRef90_A0A3Q0NDY7	48.1	0.00000879	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1342266_51	386043.lwe1198	46.6	0.00000596	Helix-turn-helix	N/A
Pfam	UHGV-1342266_51	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1342266_51	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1342266_52	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1342266_53	K22300	52.9	0.0000000000000075	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1342266_53	phrog_3	44.4	0.0000000000062	transcriptional repressor	transcription regulation
UniRef90	UHGV-1342266_53	UniRef90_A0A3D3Y6C1	63.2	0.0000000000107	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1342266_53	575605.ACQN01000023_gene710	54.7	0.0000000216	Helix-turn-helix domain	N/A
Pfam	UHGV-1342266_53	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1342266_53	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1342266_53	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1342266_55	UniRef90_A0A329UR16	67.0	0.00000000000686	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-1342266_55	NF007257,COG1396	N/A	N/A	N/A	N/A
Pfam	UHGV-1342266_57	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1342266_57	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1342266_58	K14059	155.5	0	int; integrase	N/A
PHROG	UHGV-1342266_58	phrog_1	150.1	1.82169e-44	integrase	integration and excision
UniRef90	UHGV-1342266_58	UniRef90_A0A3D2HVQ9	286.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1342266_58	411467.BACCAP_00889	81.3	0.0000000000000278	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1342266_58	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1342266_58	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1342266_58	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1342266_59	1378168.N510_03079	62.0	0.00000000234	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1342266	Yes	40,790	53	100	1
UHGV-0368866	No	32,809	54	82	1
UHGV-1432513	No	31,289	53	78	1
UHGV-0130616	No	18,993	53	47	1