Viral OTU vOTU-062039

vOTU: vOTU-062039

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-062039
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00966 → vGENUS-01194 → vSUBGEN-32483 → vOTU-062039
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → UBA738 → UBA738 sp003522945
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-2132336
Biosample ID	SAMEA3449303
Length	39,711 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	56
CDS Density	90.20%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2132336_6	phrog_59	132.2	2.2e-39	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2132336_6	UniRef90_UPI001373B0DA	123.0	3.6e-32	HNH endonuclease	N/A
eggNOG-mapper	UHGV-2132336_6	443143.GM18_2908	109.0	1.53e-27	HNH endonuclease	N/A
PADLOC	UHGV-2132336_6	HEase_00016	84.9	1.6e-24	homing endonuclease	RM
Pfam	UHGV-2132336_6	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-2132336_6	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-2132336_6	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
UniRef90	UHGV-2132336_7	UniRef90_UPI0004E194C7	77.0	2.85e-17	LuxR C-terminal-related transcriptional regulator	N/A
structural_annotation	UHGV-2132336_7	PF13404,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-2132336_8	phrog_22978	93.0	1.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-2132336_8	445971.ANASTE_00728	263.0	0	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair	N/A
Pfam	UHGV-2132336_8	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-2132336_8	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
PHROG	UHGV-2132336_11	phrog_156	110.6	4e-33	portal protein	head and packaging
structural_annotation	UHGV-2132336_11	PF12236,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2132336_12	K07273	126.4	3.4e-37	acm; lysozyme	N/A
PHROG	UHGV-2132336_12	phrog_291	108.8	6.5e-32	endolysin	lysis
UniRef90	UHGV-2132336_12	UniRef90_A0A3D2G0D9	462.0	0	Cpl-7 domain-containing protein	N/A
eggNOG-mapper	UHGV-2132336_12	1123263.AUKY01000046_gene483	161.0	4.2039e-45	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-2132336_12	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-2132336_12	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-2132336_12	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-2132336_12	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-2132336_14	phrog_892	53.5	0.0000000000000037	tail fiber protein	tail
eggNOG-mapper	UHGV-2132336_15	1408437.JNJN01000002_gene1390	76.3	0.0000000000000109	N/A	N/A
PHROG	UHGV-2132336_16	phrog_3287	136.3	2e-40	virion structural protein	head and packaging
eggNOG-mapper	UHGV-2132336_16	1232449.BAHV02000016_gene1816	342.0	0	N/A	N/A
structural_annotation	UHGV-2132336_16	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-2132336_17	phrog_13046	135.4	3.4e-40	N/A	unknown function
structural_annotation	UHGV-2132336_17	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-2132336_18	phrog_199	83.1	2.7e-24	holin	lysis
UniRef90	UHGV-2132336_18	UniRef90_A0A1G4WBH8	142.0	7.99006e-41	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-2132336_18	1160721.RBI_I01565	122.0	1.48e-33	Bacteriophage holin family	N/A
Pfam	UHGV-2132336_18	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-2132336_18	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-2132336_18	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-2132336_18	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
UniRef90	UHGV-2132336_20	UniRef90_R7FUR2	230.0	0	Mu-like prophage major head subunit gpt-like protein	N/A
structural_annotation	UHGV-2132336_20	PF19774,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2132336_21	COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-2132336_23	phrog_2	103.9	2.3e-30	terminase large subunit	head and packaging
UniRef90	UHGV-2132336_23	UniRef90_R5AVW7	568.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-2132336_23	693746.OBV_23980	553.0	0	phage Terminase large subunit	N/A
COG	UHGV-2132336_23	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-2132336_23	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
KOfam	UHGV-2132336_24	K07474	75.9	1e-21	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-2132336_24	phrog_51	89.3	5.3e-26	terminase small subunit	head and packaging
UniRef90	UHGV-2132336_24	UniRef90_R5AT05	108.0	4.97e-27	Terminase small subunit family protein	N/A
eggNOG-mapper	UHGV-2132336_24	1196028.ALEF01000043_gene470	86.3	3.98e-19	Terminase small subunit	N/A
Pfam	UHGV-2132336_24	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-2132336_24	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-2132336_24	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-2132336_26	phrog_3584	145.8	2.29813e-43	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2132336_26	483218.BACPEC_01173	66.2	0.000000000922	N/A	N/A
structural_annotation	UHGV-2132336_26	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-2132336_27	phrog_14333	93.1	2.2e-27	N/A	unknown function
UniRef90	UHGV-2132336_27	UniRef90_A0A358LEG1	130.0	8.93e-38	N/A	N/A
eggNOG-mapper	UHGV-2132336_27	1045858.Bint_0544	111.0	4.43e-31	N/A	N/A
Pfam	UHGV-2132336_27	PF13711	N/A	N/A	N/A	DUF4160
structural_annotation	UHGV-2132336_27	PF13711	N/A	N/A	N/A	N/A
PHROG	UHGV-2132336_28	phrog_2655	87.8	1e-25	excisionase	integration and excision
UniRef90	UHGV-2132336_28	UniRef90_A0A3D2G3J6	296.0	0	N/A	N/A
eggNOG-mapper	UHGV-2132336_28	665956.HMPREF1032_00099	166.0	0	N/A	N/A
Pfam	UHGV-2132336_28	PF10387	N/A	N/A	N/A	DUF2442
Pfam	UHGV-2132336_28	PF20038	N/A	N/A	Helix-turn-helix domain	HTH_59
PHROG	UHGV-2132336_29	phrog_918	106.5	1e-31	N/A	unknown function
UniRef90	UHGV-2132336_29	UniRef90_UPI0013775FB5	103.0	9.82e-27	N/A	N/A
eggNOG-mapper	UHGV-2132336_29	1504823.CCMM01000008_gene1021	107.0	1.09e-28	N/A	N/A
Pfam	UHGV-2132336_29	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-2132336_29	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-2132336_30	phrog_1048	129.3	2.3e-38	N/A	unknown function
UniRef90	UHGV-2132336_30	UniRef90_UPI0018AA3785	228.0	0	N/A	N/A
eggNOG-mapper	UHGV-2132336_30	457412.RSAG_01107	208.0	0	N/A	N/A
Pfam	UHGV-2132336_30	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-2132336_30	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-2132336_30	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-2132336_32	phrog_16427	76.2	1.8e-22	DNA methyltransferase	other
UniRef90	UHGV-2132336_32	UniRef90_A0A6L5TDR3	255.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-2132336_32	657322.FPR_26610	230.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
PADLOC	UHGV-2132336_32	oMTase_00004	48.5	6.1e-22	orphan methyltransferase	RM
Pfam	UHGV-2132336_32	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-2132336_32	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
eggNOG-mapper	UHGV-2132336_33	657322.FPR_23130	81.3	7.21e-17	N/A	N/A
PHROG	UHGV-2132336_34	phrog_355	58.2	1.3e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2132336_34	UniRef90_A0A3E3I255	147.0	6.16571e-44	N/A	N/A
eggNOG-mapper	UHGV-2132336_34	97138.C820_00250	117.0	7.19e-33	N/A	N/A
Pfam	UHGV-2132336_34	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-2132336_34	PF14359,COG3613	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2132336_37	PF14354,TIGR03655	N/A	N/A	N/A	N/A
Pfam	UHGV-2132336_41	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-2132336_41	PF06056,NF040595,COG3415	N/A	N/A	N/A	N/A
PHROG	UHGV-2132336_42	phrog_7566	97.5	7e-29	N/A	unknown function
UniRef90	UHGV-2132336_42	UniRef90_A0A1V5HS54	58.2	0.00000000954	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-2132336_42	1410650.JHWL01000003_gene2846	73.6	0.00000000000000209	N/A	N/A
structural_annotation	UHGV-2132336_43	PF12728,NF040990	N/A	N/A	N/A	N/A
KOfam	UHGV-2132336_50	K22300	61.2	2.6e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2132336_50	phrog_8	48.7	0.00000000000015	transcriptional regulator	transcription regulation
UniRef90	UHGV-2132336_50	UniRef90_A0A1Q6RKG1	126.0	7.47e-35	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2132336_50	1235797.C816_03553	112.0	1.99e-29	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-2132336_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2132336_50	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2132336_50	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-2132336_51	K07473	92.1	7.7e-27	dinJ; DNA-damage-inducible protein J	N/A
PHROG	UHGV-2132336_51	phrog_2737	61.2	1.3e-17	N/A	unknown function
UniRef90	UHGV-2132336_51	UniRef90_D1PSN3	135.0	1.17e-38	Addiction module antitoxin, RelB/DinJ family	N/A
eggNOG-mapper	UHGV-2132336_51	411471.SUBVAR_07416	135.0	1.96e-39	Addiction module antitoxin, RelB DinJ family	N/A
Pfam	UHGV-2132336_51	PF04221	N/A	N/A	RelB antitoxin	RelB
NCBIFam	UHGV-2132336_51	TIGR02384.1	N/A	N/A	type II toxin-antitoxin system RelB/DinJ family antitoxin	N/A
COG	UHGV-2132336_51	COG3077	N/A	N/A	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	N/A
structural_annotation	UHGV-2132336_51	PF04221,TIGR02384,COG3077	N/A	N/A	N/A	N/A
KOfam	UHGV-2132336_52	K19157	127.5	9.9e-38	yafQ; mRNA interferase YafQ [EC:3.1.-.-]	N/A
PHROG	UHGV-2132336_52	phrog_7251	119.4	1.1e-35	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2132336_52	UniRef90_A0A1Q6T737	159.0	0	Addiction module toxin RelE	N/A
eggNOG-mapper	UHGV-2132336_52	411471.SUBVAR_07417	157.0	0	addiction module toxin, RelE StbE family	N/A
Pfam	UHGV-2132336_52	PF15738	N/A	N/A	Bacterial toxin of type II toxin-antitoxin system, YafQ	YafQ_toxin
NCBIFam	UHGV-2132336_52	TIGR02385.1	N/A	N/A	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	N/A
COG	UHGV-2132336_52	COG3041	N/A	N/A	mRNA-degrading endonuclease YafQ (mRNA interferase), toxin component of the YafQ-DinJ toxin-antitoxin module	N/A
structural_annotation	UHGV-2132336_52	PF15738,TIGR00053,COG3041	N/A	N/A	N/A	N/A
COG	UHGV-2132336_54	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2132336_54	PF13443,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-2132336_55	K14059	106.2	4.9e-31	int; integrase	N/A
PHROG	UHGV-2132336_55	phrog_1	113.6	2.2e-33	integrase	integration and excision
UniRef90	UHGV-2132336_55	UniRef90_A0A3D2G173	627.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-2132336_55	246199.CUS_5913	85.1	0.00000000000000173	Phage integrase family	N/A
COG	UHGV-2132336_55	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2132336_55	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-2132336_56	K19304	134.8	8.7e-40	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-2132336_56	phrog_6700	102.2	2.1e-30	endolysin	lysis
UniRef90	UHGV-2132336_56	UniRef90_A0A3D2G5H6	483.0	0	Peptidase_M23 domain-containing protein	N/A
eggNOG-mapper	UHGV-2132336_56	1235797.C816_03141	172.0	0	Peptidase family M23	N/A
Pfam	UHGV-2132336_56	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-2132336_56	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2132336	Yes	39,711	59	100	1
UHGV-1606423	No	16,720	62	43	1