Viral OTU vOTU-062761

vOTU: vOTU-062761

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-062761
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00098 → vSUBFAM-00525 → vGENUS-15030 → vSUBGEN-25798 → vOTU-062761
Host Lineage
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0078424
Biosample ID	SAMEA3136741
Length	22,547 bps
CheckV Completeness	99.59% (High-quality)
CDS Count	32
CDS Density	84.10%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.59)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0078424_1	K04763	178.5	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0078424_1	phrog_1	157.2	0	integrase	integration and excision
UniRef90	UHGV-0078424_1	UniRef90_A0A1C6HMW3	379.0	0	Tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-0078424_1	1378168.N510_01454	380.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0078424_1	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0078424_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0078424_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0078424_1	PF00589,PF13495,MF_01808,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0078424_3	UniRef90_A0A1Y4MEC0	111.0	1.49e-30	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0078424_3	97138.C820_01701	103.0	4.09e-28	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0078424_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0078424_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0078424_3	PF01381,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0078424_5	phrog_314	65.3	1.4e-18	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0078424_5	UniRef90_A0A373PQX5	101.0	1.75e-24	GIY-YIG domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0078424_5	476272.RUMHYD_01755	94.0	2.5e-21	GIY-YIG type nucleases (URI domain)	N/A
Pfam	UHGV-0078424_5	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
COG	UHGV-0078424_5	COG3860	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0078424_5	PF19835,PF07453,TIGR01453	N/A	N/A	N/A	N/A
Pfam	UHGV-0078424_7	PF02021	N/A	N/A	Uncharacterised protein family UPF0102	UPF0102
structural_annotation	UHGV-0078424_7	PF11645,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0078424_9	phrog_888	49.3	0.0000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0078424_9	1151292.QEW_1347	56.6	0.000000164	Short C-terminal domain	N/A
PHROG	UHGV-0078424_11	phrog_2538	51.6	0.000000000000011	terminase small subunit	head and packaging
Pfam	UHGV-0078424_11	PF13022	N/A	N/A	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
structural_annotation	UHGV-0078424_11	PF13022	N/A	N/A	N/A	N/A
KOfam	UHGV-0078424_12	K06909	380.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0078424_12	phrog_3717	215.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0078424_12	UniRef90_A0A843HNT5	419.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0078424_12	86416.Clopa_1892	354.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0078424_12	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0078424_12	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0078424_12	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0078424_12	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0078424_12	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0078424_13	phrog_64	359.2	0	portal protein	head and packaging
UniRef90	UHGV-0078424_13	UniRef90_A0A843HXP9	377.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0078424_13	1123250.KB908417_gene647	223.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0078424_13	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0078424_13	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0078424_13	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0078424_14	phrog_115	174.3	0	minor head protein	head and packaging
UniRef90	UHGV-0078424_14	UniRef90_A0A6N3FUV3	146.0	3.55e-39	Phage Mu protein F like protein	N/A
eggNOG-mapper	UHGV-0078424_14	1408437.JNJN01000045_gene594	89.4	1.96e-17	head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0078424_14	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0078424_14	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0078424_14	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0078424_14	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0078424_15	phrog_172	96.7	3.4e-28	head scaffolding protein	head and packaging
UniRef90	UHGV-0078424_15	UniRef90_UPI00085C378A	123.0	4.49e-32	N/A	N/A
eggNOG-mapper	UHGV-0078424_15	642492.Clole_0971	79.3	0.00000000000000135	N/A	N/A
Pfam	UHGV-0078424_15	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0078424_15	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0078424_16	phrog_544	69.8	3.2e-20	major head protein	head and packaging
UniRef90	UHGV-0078424_16	UniRef90_A0A6N3FT63	251.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0078424_16	642492.Clole_0972	214.0	0	N/A	N/A
structural_annotation	UHGV-0078424_16	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0078424_17	phrog_132	54.5	0.0000000000000019	head-tail adaptor	connector
UniRef90	UHGV-0078424_17	UniRef90_UPI000D717081	68.9	0.000000000000351	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0078424_17	1123405.AUMM01000039_gene148	63.9	0.00000000000555	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0078424_17	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0078424_17	PF05135,TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0078424_18	1280689.AUJC01000007_gene3314	49.7	0.0000018	N/A	N/A
structural_annotation	UHGV-0078424_18	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0078424_19	phrog_5	98.5	8e-29	tail completion or Neck1 protein	connector
UniRef90	UHGV-0078424_19	UniRef90_A0A136Q8F4	116.0	7.99e-31	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0078424_19	673839.D2J065_9CAUD	96.3	1.36e-23	exonuclease activity	N/A
Pfam	UHGV-0078424_19	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0078424_19	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0078424_19	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0078424_20	PF09646,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0078424_21	phrog_158	62.2	1.1e-17	major tail protein	tail
UniRef90	UHGV-0078424_21	UniRef90_UPI0005906553	93.2	1.09e-21	tail protein	N/A
eggNOG-mapper	UHGV-0078424_21	1499683.CCFF01000017_gene2926	93.2	1.83e-22	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0078424_21	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0078424_21	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0078424_22	phrog_183	49.1	0.00000000000011	tail chaperone protein	tail
UniRef90	UHGV-0078424_22	UniRef90_UPI0006B5085E	96.3	1.3e-23	N/A	N/A
eggNOG-mapper	UHGV-0078424_22	1499683.CCFF01000017_gene2925	95.9	3.45e-24	N/A	N/A
Pfam	UHGV-0078424_22	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0078424_22	PF19591,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-0078424_23	phrog_2066	50.4	0.000000000000043	N/A	unknown function
eggNOG-mapper	UHGV-0078424_23	702450.CUW_0542	60.5	0.00000000122	N/A	N/A
PHROG	UHGV-0078424_24	phrog_23464	259.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0078424_24	665950.HMPREF1025_02660	203.0	0	phage tail tape measure protein	N/A
COG	UHGV-0078424_24	COG5283	N/A	N/A	Phage-related tail protein	N/A
Pfam	UHGV-0078424_25	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0078424_25	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0078424_26	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0078424_27	phrog_372	219.6	0	tail protein	tail
UniRef90	UHGV-0078424_27	UniRef90_UPI001E5C78A4	206.0	0	N/A	N/A
eggNOG-mapper	UHGV-0078424_27	552396.HMPREF0863_01449	186.0	0	N/A	N/A
Pfam	UHGV-0078424_27	PF05895	N/A	N/A	N/A	DUF859
KOfam	UHGV-0078424_30	K03088	98.1	1.2e-28	rpoE; RNA polymerase sigma-70 factor, ECF subfamily	N/A
PHROG	UHGV-0078424_30	phrog_1740	47.1	0.00000000000028	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-0078424_30	UniRef90_UPI0009303CBF	280.0	0	RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0078424_30	1226322.HMPREF1545_03206	259.0	0	N/A	N/A
Pfam	UHGV-0078424_30	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
NCBIFam	UHGV-0078424_30	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0078424_30	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0078424_30	PF08281,PF04542,MF_00961,NF009189,COG1595	N/A	N/A	N/A	N/A
UniRef90	UHGV-0078424_31	UniRef90_UPI00093074EC	131.0	3.08e-37	ABC transporter	N/A
eggNOG-mapper	UHGV-0078424_31	471875.RUMLAC_01558	113.0	5.36e-31	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0078424	Yes	22,547	43	100	1