Viral OTU vOTU-063411

vOTU: vOTU-063411

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-063411
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-03699 → vGENUS-05676 → vSUBGEN-29245 → vOTU-063411
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1464405
Biosample ID	SAMEA2581919
Length	35,545 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	57
CDS Density	93.33%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1464405_1	K14059	209.5	0	int; integrase	N/A
PHROG	UHGV-1464405_1	phrog_1	211.6	0	integrase	integration and excision
UniRef90	UHGV-1464405_1	UniRef90_A0A8F2JBJ7	300.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1464405_1	1507.HMPREF0262_00307	203.0	0	Phage integrase family	N/A
Pfam	UHGV-1464405_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1464405_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1464405_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1464405_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1464405_2	K02342	155.0	0	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-1464405_2	phrog_192	150.0	9.80909e-45	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464405_2	UniRef90_UPI001186ABA3	168.0	0	3'-5' exonuclease	N/A
eggNOG-mapper	UHGV-1464405_2	1203606.HMPREF1526_00999	164.0	0	EXOIII	N/A
PADLOC	UHGV-1464405_2	cd06127	119.2	4.4e-35	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-1464405_2	PF00929	N/A	N/A	Exonuclease	RNase_T
NCBIFam	UHGV-1464405_2	TIGR00573.1	N/A	N/A	exonuclease, DNA polymerase III, epsilon subunit family	N/A
COG	UHGV-1464405_2	COG2176	N/A	N/A	DNA polymerase III, alpha subunit (gram-positive type)	N/A
KOfam	UHGV-1464405_5	K01356	111.9	1e-32	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1464405_5	phrog_4	123.4	2.2e-36	transcriptional repressor	transcription regulation
UniRef90	UHGV-1464405_5	UniRef90_R6MAH2	281.0	0	LexA repressor	N/A
eggNOG-mapper	UHGV-1464405_5	883109.HMPREF0380_00272	133.0	4.49e-36	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-1464405_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1464405_5	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1464405_5	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1464405_5	PF00717,PF01381,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
UniRef90	UHGV-1464405_6	UniRef90_A0A259U4S5	74.3	5e-16	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1464405_6	864563.HMPREF9166_1836	67.8	0.0000000000000488	N/A	N/A
Pfam	UHGV-1464405_6	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-1464405_6	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_8	phrog_21028	48.0	0.00000000000024	N/A	unknown function
structural_annotation	UHGV-1464405_12	PF12728	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_14	phrog_4292	77.3	1.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-1464405_14	743719.PaelaDRAFT_5640	53.9	0.00000000312	N/A	N/A
structural_annotation	UHGV-1464405_16	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_19	phrog_1366	285.8	0	N/A	unknown function
UniRef90	UHGV-1464405_19	UniRef90_A0A7C8LT02	228.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1464405_19	556268.OFAG_00625	226.0	0	AAA domain	N/A
Pfam	UHGV-1464405_19	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-1464405_19	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-1464405_19	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-1464405_20	K03546	45.8	0.00000000000027	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1464405_20	phrog_1499	286.3	0	N/A	unknown function
UniRef90	UHGV-1464405_20	UniRef90_A0A315Y1S7	607.0	0	Exonuclease SbcC	N/A
eggNOG-mapper	UHGV-1464405_20	1120998.AUFC01000030_gene2215	584.0	0	DNA recombination	N/A
COG	UHGV-1464405_20	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-1464405_20	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_21	phrog_1227	241.3	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464405_21	UniRef90_UPI00041F978E	335.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1464405_21	1120998.AUFC01000030_gene2216	335.0	0	N/A	N/A
Pfam	UHGV-1464405_21	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-1464405_21	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1464405_21	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
KOfam	UHGV-1464405_22	K03111	147.5	1.30321e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1464405_22	phrog_44	150.9	7.00649e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464405_22	UniRef90_A0A2I0NAG6	139.0	8.03e-40	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1464405_22	1408417.JHYB01000002_gene700	120.0	2.68e-33	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1464405_22	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1464405_22	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1464405_22	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1464405_22	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1464405_22	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_23	phrog_3490	128.6	3.9e-38	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464405_23	UniRef90_UPI000F530A03	181.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1464405_23	357809.Cphy_2986	154.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1464405_23	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-1464405_24	K02316	91.3	1.3e-26	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1464405_24	phrog_11992	143.3	1.3999e-42	N/A	unknown function
UniRef90	UHGV-1464405_24	UniRef90_A0A0M2NGW9	100.0	4.06e-23	DNA primase	N/A
eggNOG-mapper	UHGV-1464405_24	658659.HMPREF0983_03813	103.0	1.69e-24	CHC2 zinc finger	N/A
PADLOC	UHGV-1464405_24	drt-cluster192	71.1	2.6e-20	DRT	DRT
Pfam	UHGV-1464405_24	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1464405_24	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1464405_24	PF01807,PF15188	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_25	phrog_8841	489.2	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464405_25	UniRef90_UPI000C07D7A2	636.0	0	N/A	N/A
eggNOG-mapper	UHGV-1464405_25	742738.HMPREF9460_02495	447.0	0	N/A	N/A
Pfam	UHGV-1464405_25	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-1464405_25	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-1464405_25	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1464405_25	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_28	phrog_2251	43.1	0.0000000000061	N/A	unknown function
PHROG	UHGV-1464405_30	phrog_419	83.4	3.3e-26	N/A	unknown function
UniRef90	UHGV-1464405_30	UniRef90_UPI001CBFD05B	97.1	3.36e-25	PGDYG domain-containing protein	N/A
eggNOG-mapper	UHGV-1464405_30	864563.HMPREF9166_1012	102.0	4.46e-28	N/A	N/A
structural_annotation	UHGV-1464405_30	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_32	phrog_22543	51.2	0.000000000000025	N/A	unknown function
eggNOG-mapper	UHGV-1464405_34	469596.HMPREF9488_03215	67.8	0.00000000000121	N/A	N/A
structural_annotation	UHGV-1464405_34	PF16475	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_35	phrog_2118	86.9	2.7e-25	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464405_35	UniRef90_A0A329UES5	107.0	7.76e-27	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1464405_35	1291050.JAGE01000001_gene468	99.8	1.87e-25	endonuclease activity	N/A
Pfam	UHGV-1464405_35	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1464405_35	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1464405_35	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_38	phrog_36	61.8	1.3e-17	transcriptional regulator	transcription regulation
Pfam	UHGV-1464405_38	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1464405_38	PF07374,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-1464405_39	UniRef90_A0A1C6IDQ4	55.5	0.00000000686	RHH_1 domain-containing protein	N/A
structural_annotation	UHGV-1464405_39	PF01402,NF010256	N/A	N/A	N/A	N/A
KOfam	UHGV-1464405_40	K07451	58.4	1.4e-16	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1464405_40	phrog_119	86.6	2.8e-25	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1464405_40	UniRef90_A0A2G3Q3K7	125.0	1.06e-35	Endonuclease	N/A
eggNOG-mapper	UHGV-1464405_40	755731.Clo1100_0542	125.0	1.78e-36	HNH nucleases	N/A
Pfam	UHGV-1464405_40	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1464405_40	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1464405_40	TIGR02646	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_41	phrog_361	79.1	4.8e-23	terminase small subunit	head and packaging
UniRef90	UHGV-1464405_41	UniRef90_UPI00148E37DA	114.0	1.82e-30	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1464405_41	1226322.HMPREF1545_00112	114.0	2.22e-31	Phage terminase, small subunit	N/A
Pfam	UHGV-1464405_41	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1464405_41	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1464405_41	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_42	phrog_9	307.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1464405_42	UniRef90_A0A353J4P9	863.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1464405_42	588581.Cpap_1275	805.0	0	Phage Terminase	N/A
Pfam	UHGV-1464405_42	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1464405_42	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1464405_42	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1464405_42	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_43	phrog_12	171.0	0	portal protein	head and packaging
UniRef90	UHGV-1464405_43	UniRef90_H2JJA2	441.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1464405_43	755731.Clo1100_0545	441.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1464405_43	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1464405_43	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1464405_43	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1464405_43	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1464405_44	K06904	137.9	9.99995e-41	N/A	N/A
PHROG	UHGV-1464405_44	phrog_80	172.1	0	head maturation protease	head and packaging
UniRef90	UHGV-1464405_44	UniRef90_H2JJA3	211.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1464405_44	755731.Clo1100_0546	211.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1464405_44	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1464405_44	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1464405_44	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1464405_44	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_45	phrog_10	171.4	0	major head protein	head and packaging
UniRef90	UHGV-1464405_45	UniRef90_A6XMJ6	368.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1464405_45	396034.A6XMJ6_9CAUD	368.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-1464405_45	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1464405_45	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1464405_45	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_46	phrog_2550	65.3	5.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-1464405_46	588581.Cpap_1271	80.5	1.23e-18	N/A	N/A
structural_annotation	UHGV-1464405_46	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_47	phrog_1951	77.4	1.2e-22	head-tail adaptor	connector
UniRef90	UHGV-1464405_47	UniRef90_A0A352IJI7	64.3	0.0000000000521	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1464405_47	588581.Cpap_1270	93.6	3.39e-23	N/A	N/A
structural_annotation	UHGV-1464405_47	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1464405_48	UniRef90_A0A315Y0Y7	58.2	0.0000000363	Bacteriophage HK97-gp10 putative tail-component	N/A
structural_annotation	UHGV-1464405_48	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-1464405_49	UniRef90_A0A0Z8KW16	63.2	0.0000000000957	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-1464405_49	1382358.JHVN01000024_gene1712	76.3	1.22e-16	N/A	N/A
structural_annotation	UHGV-1464405_49	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_50	phrog_2175	55.5	0.000000000000001	protein with Ig domain	other
eggNOG-mapper	UHGV-1464405_50	86416.Clopa_0346	127.0	7.99e-35	N/A	N/A
structural_annotation	UHGV-1464405_50	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1464405_52	1415774.U728_1245	77.0	1.58e-17	N/A	N/A
KOfam	UHGV-1464405_53	K20478	84.1	1.7e-25	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-1464405_53	phrog_1533	304.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1464405_53	UniRef90_A0A315Y370	260.0	0	TP901 family phage tail tape measure protein (Fragment)	N/A
eggNOG-mapper	UHGV-1464405_53	180332.JTGN01000004_gene2272	443.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1464405_53	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1464405_53	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1464405_53	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-1464405_54	phrog_33	72.7	7.8e-21	distal tail protein Dit	tail
eggNOG-mapper	UHGV-1464405_54	1121324.CLIT_8c00670	77.0	0.000000000000126	PFAM Phage tail protein	N/A
Pfam	UHGV-1464405_54	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-1464405_54	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1464405_54	PF05709,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1464405_55	phrog_538	53.2	9.9e-21	minor tail protein	tail
Pfam	UHGV-1464405_55	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1464405_55	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1464405	Yes	35,545	44	100	1
UHGV-2158537	No	15,401	43	40	1