Viral OTU vOTU-064928

vOTU: vOTU-064928

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-064928
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00135 → vSUBFAM-02048 → vGENUS-12068 → vSUBGEN-17931 → vOTU-064928
Host Lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → UMGS1781
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0112468
Biosample ID	N/A
Length	45,515 bps
CheckV Completeness	96.47% (High-quality)
CDS Count	88
CDS Density	85.85%
tRNA Count	2
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 96.47)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0112468_1	K14059	248.1	0	int; integrase	N/A
PHROG	UHGV-0112468_1	phrog_1	226.5	0	integrase	integration and excision
UniRef90	UHGV-0112468_1	UniRef90_R5XPH3	280.0	0	Integrase family protein	N/A
eggNOG-mapper	UHGV-0112468_1	1161902.HMPREF0378_0144	208.0	0	DNA integration	N/A
Pfam	UHGV-0112468_1	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-0112468_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0112468_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0112468_1	PF00589,PF13102,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0112468_2	PF15968	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0112468_3	PF20505,MF_00194,NF001462,COG2974	N/A	N/A	N/A	N/A
KOfam	UHGV-0112468_5	K22299	47.9	0.00000000000032	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0112468_5	phrog_8	69.1	9.1e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0112468_5	UniRef90_H2JIU8	90.5	2.09e-21	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-0112468_5	755731.Clo1100_0530	90.5	3.5e-22	transcriptional regulator	N/A
Pfam	UHGV-0112468_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0112468_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0112468_5	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0112468_6	K07729	56.6	6.8e-16	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0112468_6	phrog_3	47.0	0.0000000000012	transcriptional repressor	transcription regulation
UniRef90	UHGV-0112468_6	UniRef90_A0A109WBQ2	58.2	0.00000000155	HTH-type transcriptional regulator sinR	N/A
eggNOG-mapper	UHGV-0112468_6	494416.AYXN01000040_gene2433	57.4	0.000000000604	PFAM helix-turn-helix domain protein	N/A
PADLOC	UHGV-0112468_6	retron_type_VI_hth_cluster2_1	47.8	0.00000000000049	N/A	Retron
Pfam	UHGV-0112468_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0112468_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0112468_6	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0112468_7	PF07471,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_11	phrog_124	132.9	1.4e-39	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0112468_11	UniRef90_UPI0018C46309	321.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0112468_11	445972.ANACOL_00146	296.0	0	AAA domain	N/A
Pfam	UHGV-0112468_11	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0112468_11	COG1100	N/A	N/A	GTPase SAR1 family domain	N/A
structural_annotation	UHGV-0112468_11	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
UniRef90	UHGV-0112468_13	UniRef90_A0A7X5DCB3	141.0	1.69e-39	PDDEXK_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0112468_13	718252.FP2_01050	77.8	0.00000000000000275	N/A	N/A
KOfam	UHGV-0112468_14	K03111	110.4	3e-32	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0112468_14	phrog_44	115.1	7.8e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0112468_14	UniRef90_R6XT61	168.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0112468_14	509191.AEDB02000052_gene1361	138.0	8.30998e-41	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0112468_14	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0112468_14	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0112468_14	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0112468_14	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0112468_14	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_15	phrog_72	67.6	2.1e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0112468_15	UniRef90_A0A8D9PDS2	140.0	6.06e-39	NinB protein	N/A
eggNOG-mapper	UHGV-0112468_15	1399942.U3PCT8_9CAUD	134.0	1.98e-37	N/A	N/A
structural_annotation	UHGV-0112468_15	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_16	phrog_7566	73.5	2.6e-21	N/A	unknown function
UniRef90	UHGV-0112468_16	UniRef90_A0A417QFX9	64.3	0.000000000089	Phosphoenolpyruvate carboxykinase	N/A
PHROG	UHGV-0112468_18	phrog_13246	93.7	2.1e-27	replisome organizer	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0112468_18	1031288.AXAA01000044_gene1970	85.5	3.02e-17	N/A	N/A
structural_annotation	UHGV-0112468_18	PF07120,COG3756	N/A	N/A	N/A	N/A
KOfam	UHGV-0112468_19	K02315	188.3	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0112468_19	phrog_50	176.1	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0112468_19	UniRef90_A3DI90	279.0	0	AAA ATPase	N/A
eggNOG-mapper	UHGV-0112468_19	203119.Cthe_2467	279.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-0112468_19	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-0112468_19	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-0112468_19	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0112468_19	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_20	phrog_4973	56.6	4.4e-16	N/A	unknown function
UniRef90	UHGV-0112468_20	UniRef90_A0A843HM15	67.4	0.000000000000512	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0112468_20	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0112468_20	PF14090,NF040939,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0112468_21	K06940	51.5	0.000000000000023	N/A	N/A
PHROG	UHGV-0112468_21	phrog_32498	81.5	8.5e-24	N/A	unknown function
UniRef90	UHGV-0112468_21	UniRef90_A0A415HVR5	77.8	0.00000000000000106	YkgJ family cysteine cluster protein	N/A
eggNOG-mapper	UHGV-0112468_21	476272.RUMHYD_03327	76.6	4.53e-16	Putative zinc- or iron-chelating domain	N/A
Pfam	UHGV-0112468_21	PF03692	N/A	N/A	Putative zinc- or iron-chelating domain	CxxCxxCC
PHROG	UHGV-0112468_24	phrog_244	64.3	2.7e-18	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0112468_24	1304880.JAGB01000002_gene2229	105.0	9.15e-28	N/A	N/A
structural_annotation	UHGV-0112468_24	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_27	phrog_625	57.6	1e-16	N/A	unknown function
UniRef90	UHGV-0112468_27	UniRef90_A0A373D1H8	112.0	6.96e-30	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0112468_27	1235800.C819_02245	103.0	5.73e-27	N/A	N/A
structural_annotation	UHGV-0112468_27	PF12961	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_28	phrog_98	70.4	2.7e-20	N/A	unknown function
UniRef90	UHGV-0112468_28	UniRef90_A0A0X8JTB6	62.0	0.000000000144	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0112468_28	536233.CLO_1555	57.4	0.00000000223	YopX protein	N/A
Pfam	UHGV-0112468_28	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-0112468_28	PF09643,TIGR01671	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0112468_38	536233.CLO_1052	50.1	0.00000358	N/A	N/A
structural_annotation	UHGV-0112468_39	PF15188	N/A	N/A	N/A	N/A
KOfam	UHGV-0112468_40	K07665	64.3	1.9e-18	cusR, copR, silR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR	N/A
PHROG	UHGV-0112468_40	phrog_731	48.4	0.00000000000013	N/A	unknown function
Pfam	UHGV-0112468_40	PF00486	N/A	N/A	Transcriptional regulatory protein, C terminal	Trans_reg_C
COG	UHGV-0112468_40	COG0745	N/A	N/A	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	N/A
PHROG	UHGV-0112468_43	phrog_1828	50.5	0.0000000000000077	N/A	unknown function
structural_annotation	UHGV-0112468_52	PF05732,MF_01177,TIGR01610,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_56	phrog_1454	49.5	0.000000000000069	N/A	unknown function
PHROG	UHGV-0112468_57	phrog_355	58.1	1.7e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0112468_57	UniRef90_UPI0013ED9517	95.9	3.4e-23	N/A	N/A
eggNOG-mapper	UHGV-0112468_57	999411.HMPREF1092_00897	78.6	9.52e-18	N/A	N/A
Pfam	UHGV-0112468_57	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0112468_57	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_58	phrog_918	127.9	2.6e-38	N/A	unknown function
UniRef90	UHGV-0112468_58	UniRef90_UPI0013775FB5	139.0	1.67007e-41	N/A	N/A
eggNOG-mapper	UHGV-0112468_58	1504823.CCMM01000008_gene1021	147.0	4.2039e-45	N/A	N/A
Pfam	UHGV-0112468_58	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0112468_58	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_59	phrog_774	60.0	5.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0112468_59	397290.C810_05225	79.0	9.88e-18	N/A	N/A
structural_annotation	UHGV-0112468_60	PF13560,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_61	phrog_38	174.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0112468_61	UniRef90_A0A416VUC6	179.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0112468_61	428127.EUBDOL_01551	223.0	0	chromosome segregation	N/A
COG	UHGV-0112468_61	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0112468_61	PF17289,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_62	phrog_1233	74.6	1.6e-21	N/A	unknown function
UniRef90	UHGV-0112468_62	UniRef90_A0A4U9XN35	54.3	0.000000507	N/A	N/A
eggNOG-mapper	UHGV-0112468_62	86416.Clopa_2540	78.2	1.91e-17	N/A	N/A
PHROG	UHGV-0112468_63	phrog_64	178.7	0	portal protein	head and packaging
UniRef90	UHGV-0112468_63	UniRef90_A0A374HKE8	336.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0112468_63	1121866.AUGK01000003_gene1429	311.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0112468_63	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0112468_63	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0112468_64	1232453.BAIF02000058_gene1626	52.8	0.00000856	N/A	N/A
structural_annotation	UHGV-0112468_64	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_65	phrog_1328	145.5	3.19496e-43	major head protein	head and packaging
UniRef90	UHGV-0112468_65	UniRef90_UPI00164DD2D5	380.0	0	N/A	N/A
eggNOG-mapper	UHGV-0112468_65	665956.HMPREF1032_03619	226.0	0	N/A	N/A
Pfam	UHGV-0112468_65	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-0112468_65	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0112468_66	K17249	65.1	1.9e-19	pglH; GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase [EC:2.4.1.292]	N/A
UniRef90	UHGV-0112468_66	UniRef90_A0A3A9SUZ7	151.0	5.54001e-40	Glycosyltransferase	N/A
eggNOG-mapper	UHGV-0112468_66	1174504.AJTN02000077_gene3161	63.5	0.00000000741	Glycosyl transferases group 1	N/A
Pfam	UHGV-0112468_66	PF00534	N/A	N/A	Glycosyl transferases group 1	Glycos_transf_1
COG	UHGV-0112468_66	COG0438	N/A	N/A	Glycosyltransferase involved in cell wall bisynthesis	N/A
structural_annotation	UHGV-0112468_66	PF00534,PF16994,MF_01695,TIGR04005,COG0438	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0112468_68	TIGR01560	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0112468_69	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0112468_70	UniRef90_A0A7C7ERK4	58.5	0.0000000783	HK97 gp10 family phage protein	N/A
structural_annotation	UHGV-0112468_71	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_72	phrog_158	53.4	0.0000000000000055	major tail protein	tail
UniRef90	UHGV-0112468_72	UniRef90_A0A7Z7CEA8	75.5	0.00000000000000962	Phage tail tube protein, TTP	N/A
eggNOG-mapper	UHGV-0112468_72	1140002.I570_01436	72.0	0.0000000000000399	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0112468_72	PF16461	N/A	N/A	Lambda phage tail tube protein, TTP	Phage_TTP_12
structural_annotation	UHGV-0112468_72	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0112468_73	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_75	phrog_1535	113.3	2.2e-33	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0112468_75	428127.EUBDOL_01563	191.0	0	homoserine transmembrane transporter activity	N/A
COG	UHGV-0112468_75	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-0112468_75	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_76	phrog_1194	49.6	0.000000000000076	N/A	unknown function
eggNOG-mapper	UHGV-0112468_76	324057.Pjdr2_1553	49.3	0.00000572	N/A	N/A
Pfam	UHGV-0112468_76	PF20458	N/A	N/A	N/A	DUF6711
PHROG	UHGV-0112468_77	phrog_6616	102.3	2.1e-30	tail protein	tail
UniRef90	UHGV-0112468_77	UniRef90_R6H354	82.8	0.000000000000223	Carbohydrate binding domain protein	N/A
eggNOG-mapper	UHGV-0112468_77	1414720.CBYM010000002_gene560	79.3	0.000000000000624	Phage minor structural protein	N/A
COG	UHGV-0112468_77	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0112468_77	PF05113,PF09327,NF033848,COG3500	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0112468_78	1232453.BAIF02000059_gene1614	68.6	0.00000000104	N/A	N/A
structural_annotation	UHGV-0112468_79	PF03906	N/A	N/A	N/A	N/A
PHROG	UHGV-0112468_80	phrog_2712	62.1	9.1e-18	tail fiber protein	tail
PHROG	UHGV-0112468_82	phrog_13632	46.4	0.00000000000052	N/A	unknown function
eggNOG-mapper	UHGV-0112468_82	1399942.U3PIX4_9CAUD	54.3	0.0000000503	N/A	N/A
PHROG	UHGV-0112468_83	phrog_881	74.0	1.4e-21	holin	lysis
UniRef90	UHGV-0112468_83	UniRef90_A0A6G7WEI6	73.9	4.72e-16	Holin	N/A
eggNOG-mapper	UHGV-0112468_83	1140001.I571_01849	60.8	0.0000000000129	Putative phage holin Dp-1	N/A
Pfam	UHGV-0112468_83	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0112468_83	PF16938,COG3237	N/A	N/A	N/A	N/A
KOfam	UHGV-0112468_84	K11062	53.0	0.0000000000000033	entD; probable enterotoxin D	N/A
PHROG	UHGV-0112468_84	phrog_18955	41.1	9.6e-17	N/A	unknown function
UniRef90	UHGV-0112468_84	UniRef90_R7LPC2	167.0	4.90454e-44	Peptidoglycan-binding domain 1 protein	N/A
eggNOG-mapper	UHGV-0112468_84	1304880.JAGB01000002_gene2417	82.8	0.0000000000000158	Spoiid lytb domain protein	N/A
Pfam	UHGV-0112468_84	PF13529	N/A	N/A	Peptidase_C39 like family	Peptidase_C39_2
Pfam	UHGV-0112468_84	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0112468_84	COG2385	N/A	N/A	Peptidoglycan hydrolase (amidase) enhancer domain SpoIID	N/A
structural_annotation	UHGV-0112468_84	PF03412,PF18342,PF06347,NF040670,NF033920,COG3807,COG3271	N/A	N/A	N/A	N/A
KOfam	UHGV-0112468_86	K07341	66.0	1.2e-18	doc; death on curing protein	N/A
PHROG	UHGV-0112468_86	phrog_577	61.1	1.7e-17	Doc-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0112468_86	UniRef90_A0A7W1HLF5	54.7	0.000000152	Type II toxin-antitoxin system death-on-curing family toxin	N/A
eggNOG-mapper	UHGV-0112468_86	882086.SacxiDRAFT_0571	54.3	0.0000000311	Fic/DOC family	N/A
NCBIFam	UHGV-0112468_86	TIGR01550.1	N/A	N/A	type II toxin-antitoxin system death-on-curing family toxin	N/A
COG	UHGV-0112468_86	COG3654	N/A	N/A	Prophage maintenance system killer protein	N/A
KOfam	UHGV-0112468_87	K22299	56.9	5.4e-16	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0112468_87	phrog_8	47.9	0.00000000000032	transcriptional regulator	transcription regulation
UniRef90	UHGV-0112468_87	UniRef90_R6YGA8	155.0	0	Post-exponential-phase responses transcriptional regulator	N/A
PADLOC	UHGV-0112468_87	retron_type_VI_hth_cluster2_1	52.8	0.000000000000012	N/A	Retron
Pfam	UHGV-0112468_87	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0112468_87	PF09388	N/A	N/A	Spo0E like sporulation regulatory protein	SpoOE-like
COG	UHGV-0112468_87	COG3800	N/A	N/A	Predicted transcriptional regulator	N/A
structural_annotation	UHGV-0112468_87	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0112468	Yes	45,515	29	96	1
UHGV-0130516	No	20,700	31	43	1