Viral OTU vOTU-065077

vOTU: vOTU-065077

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-065077
Number of Genomes	24
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 → vSUBFAM-05284 → vGENUS-11095 → vSUBGEN-15395 → vOTU-065077
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruthenibacterium → Ruthenibacterium lactatiformans
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-2081861
Biosample ID	SAMEA3708660
Length	37,029 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	53
CDS Density	87.71%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2081861_1	K01356	86.3	4.1e-25	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-2081861_1	phrog_4	119.2	3.6e-35	transcriptional repressor	transcription regulation
UniRef90	UHGV-2081861_1	UniRef90_UPI000A933E15	445.0	0	LexA family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2081861_1	665956.HMPREF1032_04076	365.0	0	Peptidase S24-like	N/A
Pfam	UHGV-2081861_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-2081861_1	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-2081861_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2081861_1	PF00717,PF12844,MF_00015,TIGR00498,TIGR03070,COG1974,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_7	phrog_310	343.2	0	transposase	integration and excision
UniRef90	UHGV-2081861_7	UniRef90_A0A2V2FEC2	569.0	0	MerR family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2081861_7	665956.HMPREF1032_02979	1176.0	0	Mu transposase, C-terminal	N/A
PADLOC	UHGV-2081861_7	TnsB_0_V-K	48.7	0.00000000000009	TnsB_0_V-K	CRISPR-CAS
Pfam	UHGV-2081861_7	PF09039	N/A	N/A	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
Pfam	UHGV-2081861_7	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-2081861_7	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-2081861_7	PF02914,PF09039,PF09299,PF21531,NF033594,TIGR01764,COG3316,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-2081861_8	K07132	67.8	1.6e-19	MuB; ATP-dependent target DNA activator	N/A
PHROG	UHGV-2081861_8	phrog_296	124.5	1e-36	DNA transposition protein	integration and excision
UniRef90	UHGV-2081861_8	UniRef90_G9RTU4	592.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2081861_8	665956.HMPREF1032_02978	592.0	0	AAA domain	N/A
Pfam	UHGV-2081861_8	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-2081861_8	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
PHROG	UHGV-2081861_10	phrog_36365	69.8	2.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-2081861_10	665956.HMPREF1032_02975	116.0	1.08e-33	N/A	N/A
PHROG	UHGV-2081861_11	phrog_2717	56.4	4.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-2081861_11	665956.HMPREF1032_04088	253.0	0	N/A	N/A
UniRef90	UHGV-2081861_12	UniRef90_UPI001967CCF1	78.2	3.65e-16	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-2081861_12	PF04218,NF040595,COG1710	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2081861_15	PF06657	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-2081861_17	cluster_167795	140.0	0	NA	N/A
PHROG	UHGV-2081861_18	phrog_491	98.5	5.9e-29	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2081861_18	UniRef90_A0A6N3F7T2	270.0	0	Bacteriophage Mu Gam like protein	N/A
eggNOG-mapper	UHGV-2081861_18	665956.HMPREF1032_02965	331.0	0	Bacteriophage Mu Gam like protein	N/A
Pfam	UHGV-2081861_18	PF07352	N/A	N/A	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
COG	UHGV-2081861_18	COG4396	N/A	N/A	Mu-like prophage host-nuclease inhibitor protein Gam	N/A
structural_annotation	UHGV-2081861_18	PF07352,COG4396	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_19	phrog_286	73.0	4.4e-21	N/A	unknown function
UniRef90	UHGV-2081861_19	UniRef90_A0A372V3L1	292.0	0	Regulatory protein GemA	N/A
eggNOG-mapper	UHGV-2081861_19	665956.HMPREF1032_02964	338.0	0	N/A	N/A
Pfam	UHGV-2081861_19	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
structural_annotation	UHGV-2081861_19	PF06252	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_20	phrog_836	53.2	0.0000000000000055	late transcriptional activator	transcription regulation
UniRef90	UHGV-2081861_20	UniRef90_G9RTS9	226.0	0	Mor domain-containing protein	N/A
eggNOG-mapper	UHGV-2081861_20	665956.HMPREF1032_02963	226.0	0	Mor transcription activator family	N/A
Pfam	UHGV-2081861_20	PF08765	N/A	N/A	Mor transcription activator family	Mor
COG	UHGV-2081861_20	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
structural_annotation	UHGV-2081861_20	PF08765,COG5566	N/A	N/A	N/A	N/A
UniRef90	UHGV-2081861_21	UniRef90_A0A372V349	163.0	0	N/A	N/A
eggNOG-mapper	UHGV-2081861_21	665956.HMPREF1032_01633	143.0	8.33773e-43	N/A	N/A
PHROG	UHGV-2081861_22	phrog_25462	52.4	0.0000000000000094	N/A	unknown function
eggNOG-mapper	UHGV-2081861_22	1160721.RBI_II00547	66.6	0.000000000000933	N/A	N/A
structural_annotation	UHGV-2081861_22	PF01638,MF_01819,NF002926,COG1733	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_23	phrog_426	77.1	3.2e-22	terminase small subunit	head and packaging
UniRef90	UHGV-2081861_23	UniRef90_A0A6I2UDS2	288.0	0	N/A	N/A
eggNOG-mapper	UHGV-2081861_23	665956.HMPREF1032_02960	347.0	0	N/A	N/A
Pfam	UHGV-2081861_23	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-2081861_23	PF11985	N/A	N/A	N/A	N/A
KOfam	UHGV-2081861_24	K02601	96.8	2.5e-28	nusG; transcription termination/antitermination protein NusG	N/A
PHROG	UHGV-2081861_24	phrog_6386	88.1	9.1e-26	transcription antiterminator	transcription regulation
UniRef90	UHGV-2081861_24	UniRef90_G9RTS5	333.0	0	NGN domain-containing protein	N/A
eggNOG-mapper	UHGV-2081861_24	665956.HMPREF1032_02959	333.0	0	Transcription termination factor nusG	N/A
Pfam	UHGV-2081861_24	PF02357	N/A	N/A	Transcription termination factor nusG	NusG
Pfam	UHGV-2081861_24	PF00467	N/A	N/A	KOW motif	KOW
COG	UHGV-2081861_24	COG0250	N/A	N/A	Transcription termination/antitermination protein NusG	N/A
structural_annotation	UHGV-2081861_24	PF02357,MF_00951,NF033641,COG0250	N/A	N/A	N/A	N/A
UniRef90	UHGV-2081861_25	UniRef90_A0A1Y4TKH5	94.7	3.86e-23	HTH_Tnp_1_2 domain-containing protein	N/A
KOfam	UHGV-2081861_26	K06909	389.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2081861_26	phrog_3717	162.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-2081861_26	UniRef90_G9RTS3	776.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-2081861_26	665956.HMPREF1032_02957	776.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2081861_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2081861_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2081861_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2081861_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2081861_26	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_28	phrog_533	140.3	1.10002e-41	portal protein	head and packaging
UniRef90	UHGV-2081861_28	UniRef90_G9RTS1	862.0	0	A118 family phage portal protein, putative	N/A
eggNOG-mapper	UHGV-2081861_28	411471.SUBVAR_06996	422.0	0	N/A	N/A
structural_annotation	UHGV-2081861_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2081861_29	K11044	54.9	3.4e-16	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	N/A
PHROG	UHGV-2081861_29	phrog_581	162.7	0	minor head protein	head and packaging
UniRef90	UHGV-2081861_29	UniRef90_A0A6N3F6N5	915.0	0	Epidermal cell differentiation inhibitor	N/A
eggNOG-mapper	UHGV-2081861_29	665956.HMPREF1032_02954	723.0	0	N/A	N/A
Pfam	UHGV-2081861_29	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-2081861_29	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-2081861_29	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2081861_29	PF06152,PF03496,MF_04139,NF041404	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_31	phrog_194	72.0	8.8e-21	head scaffolding protein	head and packaging
UniRef90	UHGV-2081861_31	UniRef90_A0A6N3F6J3	241.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-2081861_31	665956.HMPREF1032_02952	315.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-2081861_31	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2081861_31	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_32	phrog_422	206.0	0	major head protein	head and packaging
eggNOG-mapper	UHGV-2081861_32	665956.HMPREF1032_02951	673.0	0	N/A	N/A
structural_annotation	UHGV-2081861_32	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-2081861_33	UniRef90_A0A6I2U7V7	110.0	1.56e-30	C2H2-type domain-containing protein	N/A
PHROG	UHGV-2081861_34	phrog_541	87.0	1.8e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-2081861_34	411470.RUMGNA_02220	56.2	0.0000000252	N/A	N/A
PHROG	UHGV-2081861_35	phrog_3366	58.5	2.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-2081861_35	411471.SUBVAR_06991	82.0	1.43e-18	N/A	N/A
Pfam	UHGV-2081861_35	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-2081861_35	PF20536,TIGR01563,COG1853	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_36	phrog_556	118.7	2.5e-35	minor head protein	head and packaging
UniRef90	UHGV-2081861_36	UniRef90_UPI0011061BF4	138.0	1.97e-39	minor capsid protein	N/A
eggNOG-mapper	UHGV-2081861_36	665956.HMPREF1032_02947	275.0	0	Minor capsid protein	N/A
structural_annotation	UHGV-2081861_36	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_37	phrog_3266	136.8	7.50003e-41	tail completion	connector
UniRef90	UHGV-2081861_37	UniRef90_A0A355D907	116.0	1.59e-30	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-2081861_37	665956.HMPREF1032_02946	291.0	0	N/A	N/A
structural_annotation	UHGV-2081861_37	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_38	phrog_820	65.1	1e-18	major tail protein	tail
UniRef90	UHGV-2081861_38	UniRef90_A0A174M1L1	137.0	5.37e-37	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-2081861_38	665956.HMPREF1032_02945	326.0	0	N/A	N/A
structural_annotation	UHGV-2081861_38	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_40	phrog_4450	63.7	3.2e-18	N/A	unknown function
Pfam	UHGV-2081861_40	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-2081861_40	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_41	phrog_706	136.9	9.90003e-41	N/A	unknown function
UniRef90	UHGV-2081861_41	UniRef90_A0A6N3F5V9	251.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-2081861_41	665956.HMPREF1032_02943	416.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2081861_41	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2081861_41	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_42	phrog_1686	367.4	0	tail length tape measure protein	tail
UniRef90	UHGV-2081861_42	UniRef90_G9RTQ8	1497.0	0	Tape measure domain-containing protein	N/A
eggNOG-mapper	UHGV-2081861_42	665956.HMPREF1032_02942	1497.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-2081861_42	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-2081861_42	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-2081861_42	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-2081861_42	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_43	phrog_36410	74.5	9.6e-22	N/A	unknown function
UniRef90	UHGV-2081861_43	UniRef90_A0A6N3F5Z2	468.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-2081861_43	665956.HMPREF1032_02941	567.0	0	Phage tail protein	N/A
structural_annotation	UHGV-2081861_43	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_44	phrog_538	185.0	0	minor tail protein	tail
UniRef90	UHGV-2081861_44	UniRef90_UPI000C7C9115	414.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-2081861_44	665956.HMPREF1032_02940	726.0	0	N/A	N/A
Pfam	UHGV-2081861_44	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-2081861_44	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_45	phrog_9534	137.5	1.2e-40	head protein	head and packaging
eggNOG-mapper	UHGV-2081861_45	665956.HMPREF1032_02939	431.0	0	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-2081861_45	PF21567	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_47	phrog_36886	47.9	1.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-2081861_47	665956.HMPREF1032_02937	663.0	0	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-2081861_47	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-2081861_48	phrog_38190	71.5	6.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-2081861_48	665956.HMPREF1032_02936	258.0	0	N/A	N/A
PHROG	UHGV-2081861_49	phrog_9116	97.9	9.4e-29	tail protein	tail
UniRef90	UHGV-2081861_49	UniRef90_G9RTP9	264.0	0	Collar domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-2081861_49	665956.HMPREF1032_02933	264.0	0	PFAM Tail Collar domain protein	N/A
Pfam	UHGV-2081861_49	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
COG	UHGV-2081861_49	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-2081861_49	PF07484,COG4675	N/A	N/A	N/A	N/A
KOfam	UHGV-2081861_50	K14059	171.3	0	int; integrase	N/A
PHROG	UHGV-2081861_50	phrog_1	168.3	0	integrase	integration and excision
UniRef90	UHGV-2081861_50	UniRef90_G9RTP6	721.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-2081861_50	665956.HMPREF1032_02930	721.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-2081861_50	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-2081861_50	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2081861_50	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2081861_50	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-2081861_52	K21472	52.2	0.000000000000013	lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]	N/A
UniRef90	UHGV-2081861_52	UniRef90_UPI001966E044	549.0	0	peptidoglycan DD-metalloendopeptidase family protein	N/A
eggNOG-mapper	UHGV-2081861_52	665956.HMPREF1032_01628	534.0	0	N/A	N/A
Pfam	UHGV-2081861_52	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
structural_annotation	UHGV-2081861_52	PF01551,NF040883,COG0739	N/A	N/A	N/A	N/A
PHROG	UHGV-2081861_53	phrog_20258	76.0	2.9e-22	N/A	unknown function
eggNOG-mapper	UHGV-2081861_53	665956.HMPREF1032_02927	174.0	0	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2081861	Yes	37,029	57	100	1
UHGV-0390515	No	32,672	57	83	1
UHGV-0391236	No	30,960	57	80	1
UHGV-2022555	No	28,720	57	74	1
UHGV-0128380	No	26,966	57	69	1
UHGV-0196908	No	25,817	58	66	1
UHGV-1966696	No	24,577	58	64	1
UHGV-0117208	No	34,130	57	63	1
UHGV-1298042	No	24,270	58	62	1
UHGV-0153032	No	24,705	58	62	1
UHGV-2154380	No	24,179	58	62	1
UHGV-0108948	No	24,045	58	61	1
UHGV-1947588	No	23,442	59	59	1
UHGV-2128431	No	18,859	58	49	1
UHGV-2149039	No	18,269	59	47	1
UHGV-2160511	No	17,478	59	46	1
UHGV-0125760	No	19,557	56	44	1
UHGV-0406560	No	16,844	57	44	1
UHGV-2204955	No	15,050	59	41	1
UHGV-2238039	No	15,123	59	40	1
UHGV-0087459	No	12,247	55	29	1
UHGV-1952325	No	11,174	57	28	1
UHGV-1942226	No	10,623	59	28	1
UHGV-2116946	No	10,663	58	26	1