Viral OTU vOTU-065898

vOTU: vOTU-065898

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-065898
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-00184 → vGENUS-00321 → vSUBGEN-47220 → vOTU-065898
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0029591
Biosample ID	N/A
Length	41,637 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	59
CDS Density	90.56%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-0029591_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0029591_1	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0029591_2	K01520	153.0	1.4013e-45	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0029591_2	phrog_135	136.5	1.3e-40	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029591_2	UniRef90_A0A3D3Y5Q7	245.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0029591_2	887929.HMP0721_1278	138.0	2.65e-40	dUTPase	N/A
Pfam	UHGV-0029591_2	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0029591_2	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0029591_2	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0029591_2	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0029591_5	phrog_1770	56.3	6.1e-16	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0029591_5	536233.CLO_1822	155.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0029591_5	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029591_6	UniRef90_UPI001A9B9FB4	246.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0029591_6	1410632.JHWW01000006_gene695	200.0	0	N/A	N/A
Pfam	UHGV-0029591_6	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-0029591_6	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0029591_9	phrog_599	41.4	0.000000000026	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0029591_9	UniRef90_UPI0018983B82	51.2	0.00000248	Lar family restriction alleviation protein	N/A
Pfam	UHGV-0029591_9	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-0029591_9	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
PHROG	UHGV-0029591_10	phrog_478	125.1	2.9e-37	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0029591_10	UniRef90_R6E548	163.0	0	Prophage pi1 protein 29	N/A
eggNOG-mapper	UHGV-0029591_10	1111121.HMPREF1247_0834	105.0	2.83e-27	N/A	N/A
PHROG	UHGV-0029591_12	phrog_9298	61.1	1.3e-17	radical SAM domain protein	other
UniRef90	UHGV-0029591_12	UniRef90_D4C6F1	308.0	0	Elp3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0029591_12	742738.HMPREF9460_03770	293.0	0	radical SAM domain protein	N/A
COG	UHGV-0029591_12	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0029591_12	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A
PHROG	UHGV-0029591_13	phrog_757	232.8	0	DNA methyltransferase	other
UniRef90	UHGV-0029591_13	UniRef90_UPI001A9B5584	225.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0029591_13	1235790.C805_00032	226.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0029591_13	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0029591_13	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0029591_15	K00571	117.4	1.5e-34	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0029591_15	phrog_67	101.6	1.1e-30	DNA methyltransferase	other
UniRef90	UHGV-0029591_15	UniRef90_A0A1C6E5W1	427.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0029591_15	910314.HMPREF9220_0636	384.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0029591_15	MTase_II_00157	96.8	3.4e-29	Type II methyltransferase	RM
Pfam	UHGV-0029591_15	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0029591_15	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0029591_15	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0029591_17	phrog_15768	95.7	5.4e-28	N/A	unknown function
eggNOG-mapper	UHGV-0029591_17	742740.HMPREF9474_03117	105.0	2.56e-24	N/A	N/A
structural_annotation	UHGV-0029591_17	PF01978,MF_01819,NF041413,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0029591_18	K03111	136.4	3.09999e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0029591_18	phrog_44	141.1	6.39973e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029591_18	UniRef90_A0A2V2CEG7	186.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0029591_18	445972.ANACOL_00151	177.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0029591_18	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0029591_18	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0029591_18	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0029591_18	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0029591_18	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0029591_20	phrog_7370	60.3	2.6e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029591_20	UniRef90_A0A3D1LDS4	143.0	2.07953e-42	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0029591_20	1235800.C819_02254	64.7	0.00000000000573	HNH nucleases	N/A
Pfam	UHGV-0029591_20	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-0029591_21	phrog_72	70.0	2.9e-20	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029591_21	UniRef90_A0A8D9PDS2	155.0	5.60519e-45	NinB protein	N/A
eggNOG-mapper	UHGV-0029591_21	445972.ANACOL_01825	156.0	0	N/A	N/A
structural_annotation	UHGV-0029591_21	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0029591_22	phrog_434	40.2	0.000000000041	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029591_22	UniRef90_B0PAM4	138.0	6.25e-38	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-0029591_22	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0029591_23	phrog_659	44.5	0.0000000000018	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029591_23	UniRef90_A0A6N9QJT6	200.0	0	N/A	N/A
eggNOG-mapper	UHGV-0029591_23	33035.JPJF01000135_gene5082	134.0	9.65e-37	N/A	N/A
Pfam	UHGV-0029591_23	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0029591_23	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0029591_25	phrog_4973	71.7	8.5e-21	N/A	unknown function
UniRef90	UHGV-0029591_25	UniRef90_A0A3D3Y0P8	80.9	1.37e-18	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0029591_25	1072685.IX83_07155	59.7	0.0000000000381	Helix-turn-helix domain	N/A
Pfam	UHGV-0029591_25	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0029591_25	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-0029591_28	phrog_1468	49.3	0.000000000000043	transcriptional repressor	transcription regulation
UniRef90	UHGV-0029591_28	UniRef90_UPI001C1245AB	49.3	0.00000354	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0029591_28	1347392.CCEZ01000031_gene1729	47.0	0.00000589	Helix-turn-helix	N/A
Pfam	UHGV-0029591_28	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0029591_28	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0029591_29	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0029591_30	K22300	43.7	0.0000000000049	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0029591_30	UniRef90_A0A3D3Y6C1	52.8	0.0000000863	XRE family transcriptional regulator	N/A
Pfam	UHGV-0029591_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0029591_30	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0029591_31	phrog_8	52.4	0.000000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0029591_31	UniRef90_A0A6N3FDD4	81.3	1.07e-17	HTH-type transcriptional regulator Xre	N/A
eggNOG-mapper	UHGV-0029591_31	1378168.N510_01712	77.8	6.25e-16	N/A	N/A
Pfam	UHGV-0029591_31	PF08667	N/A	N/A	BetR domain	BetR
structural_annotation	UHGV-0029591_31	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029591_33	180332.JTGN01000007_gene3635	79.3	0.0000000000000228	Competence protein ComEC	N/A
COG	UHGV-0029591_33	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
structural_annotation	UHGV-0029591_34	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0029591_35	K14059	150.5	1.82169e-44	int; integrase	N/A
PHROG	UHGV-0029591_35	phrog_1	146.8	1.69557e-43	integrase	integration and excision
UniRef90	UHGV-0029591_35	UniRef90_A0A3D2HVQ9	282.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0029591_35	411467.BACCAP_00889	82.0	0.0000000000000152	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0029591_35	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0029591_35	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0029591_35	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029591_36	1378168.N510_03079	60.1	0.0000000104	N/A	N/A
structural_annotation	UHGV-0029591_39	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0029591_40	K01447	93.5	2.9e-27	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0029591_40	phrog_670	116.7	1.6e-34	endolysin	lysis
UniRef90	UHGV-0029591_40	UniRef90_A0A3D4VSU2	154.0	1.65353e-43	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0029591_40	1120998.AUFC01000016_gene8	111.0	2.8e-27	Ami_2	N/A
Pfam	UHGV-0029591_40	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0029591_40	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0029591_40	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0029591_41	phrog_443	61.9	1.7e-17	holin	lysis
UniRef90	UHGV-0029591_41	UniRef90_UPI001BB47E53	92.4	2.41e-23	holin	N/A
eggNOG-mapper	UHGV-0029591_41	1235797.C816_04172	90.5	2.11e-23	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0029591_41	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0029591_41	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0029591_42	phrog_937	52.2	0.000000000000011	hemolysin	other
UniRef90	UHGV-0029591_43	UniRef90_A0A1C6H462	382.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0029591_43	1408437.JNJN01000060_gene452	330.0	0	heme binding	N/A
Pfam	UHGV-0029591_43	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
COG	UHGV-0029591_43	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
eggNOG-mapper	UHGV-0029591_44	693746.OBV_01600	88.6	3.83e-16	N/A	N/A
eggNOG-mapper	UHGV-0029591_45	1235797.C816_04174	139.0	3.03e-39	N/A	N/A
PHROG	UHGV-0029591_46	phrog_10993	103.6	1.8e-30	Hoc-like head decoration	head and packaging
eggNOG-mapper	UHGV-0029591_46	718252.FP2_16970	92.4	3.82e-19	N/A	N/A
Pfam	UHGV-0029591_46	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0029591_46	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029591_48	411473.RUMCAL_00420	71.2	0.00000000013	nuclear chromosome segregation	N/A
COG	UHGV-0029591_48	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0029591_49	phrog_156	134.2	6.50001e-40	portal protein	head and packaging
eggNOG-mapper	UHGV-0029591_49	693746.OBV_01670	600.0	0	N/A	N/A
structural_annotation	UHGV-0029591_49	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0029591_51	phrog_3287	46.3	0.0000000000000058	virion structural protein	head and packaging
UniRef90	UHGV-0029591_51	UniRef90_A0A4D7ASB8	500.0	0	N/A	N/A
eggNOG-mapper	UHGV-0029591_51	693746.OBV_01680	491.0	0	N/A	N/A
structural_annotation	UHGV-0029591_51	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
PHROG	UHGV-0029591_52	phrog_422	145.0	4.49817e-43	major head protein	head and packaging
UniRef90	UHGV-0029591_52	UniRef90_A0A6A8VJ17	320.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0029591_52	1408437.JNJN01000001_gene1710	231.0	0	N/A	N/A
Pfam	UHGV-0029591_52	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0029591_52	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0029591_53	phrog_14606	42.2	0.0000000000036	N/A	unknown function
eggNOG-mapper	UHGV-0029591_53	755731.Clo1100_2435	69.3	0.000000000108	N/A	N/A
eggNOG-mapper	UHGV-0029591_54	693746.OBV_01730	73.9	0.00000000000000563	N/A	N/A
structural_annotation	UHGV-0029591_54	PF11650	N/A	N/A	N/A	N/A
KOfam	UHGV-0029591_55	K06909	136.5	2.29999e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0029591_55	phrog_979	119.1	6.5e-37	terminase large subunit	head and packaging
UniRef90	UHGV-0029591_55	UniRef90_G4KR97	546.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0029591_55	693746.OBV_01690	546.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0029591_55	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0029591_55	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0029591_55	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029591_57	PF03869,NF010256	N/A	N/A	N/A	N/A
KOfam	UHGV-0029591_59	K07491	102.2	9.5e-30	rayT; REP-associated tyrosine transposase	N/A
PHROG	UHGV-0029591_59	phrog_2577	175.0	0	transposase	integration and excision
UniRef90	UHGV-0029591_59	UniRef90_A0A1Y4WHE4	315.0	0	IS200/IS605 family transposase	N/A
eggNOG-mapper	UHGV-0029591_59	457396.CSBG_03451	266.0	0	Transposase	N/A
Pfam	UHGV-0029591_59	PF01797	N/A	N/A	Transposase IS200 like	Y1_Tnp
NCBIFam	UHGV-0029591_59	NF033573.1	N/A	N/A	IS200/IS605 family transposase	N/A
COG	UHGV-0029591_59	COG1943	N/A	N/A	REP element-mobilizing transposase RayT	N/A
structural_annotation	UHGV-0029591_59	PF01797,MF_00360,NF033573,COG1943	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0029591	Yes	41,637	53	100	1
UHGV-0011471	No	25,133	53	63	1