Viral OTU vOTU-066094

vOTU: vOTU-066094

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-066094
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00200 → vGENUS-00304 → vSUBGEN-03794 → vOTU-066094
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0178817
Biosample ID	SAMN09781790
Length	34,440 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	56
CDS Density	95.06%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0178817_1	phrog_119	73.0	4.1e-21	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178817_1	UniRef90_G9YSB5	149.0	1.96182e-44	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0178817_1	1235792.C808_00081	84.3	1.4e-19	HNH nucleases	N/A
Pfam	UHGV-0178817_1	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0178817_1	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
UniRef90	UHGV-0178817_2	UniRef90_UPI001F232519	71.6	0.00000000000000455	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-0178817_2	1226322.HMPREF1545_00110	68.2	0.0000000000000175	Cysteine-rich KTR	N/A
Pfam	UHGV-0178817_2	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0178817_2	PF14205	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_3	phrog_3584	74.9	1.3e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0178817_3	742738.HMPREF9460_04063	241.0	0	N/A	N/A
structural_annotation	UHGV-0178817_3	PF01446	N/A	N/A	N/A	N/A
UniRef90	UHGV-0178817_9	UniRef90_R6QWY1	100.0	5.75e-26	28	N/A
dbAPIS	UHGV-0178817_9	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
PHROG	UHGV-0178817_10	phrog_38832	53.9	0.000000000000002	N/A	unknown function
eggNOG-mapper	UHGV-0178817_10	1232443.BAIA02000078_gene48	63.5	0.0000000000112	N/A	N/A
structural_annotation	UHGV-0178817_10	PF18300,MF_01549,NF007981	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_11	phrog_3136	121.1	2.8e-36	N/A	unknown function
UniRef90	UHGV-0178817_11	UniRef90_A0A3D0HBD2	159.0	0	ASCH domain-containing protein	N/A
structural_annotation	UHGV-0178817_11	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-0178817_16	K03497	70.0	2.4e-21	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0178817_16	phrog_27290	392.1	0	N/A	unknown function
UniRef90	UHGV-0178817_16	UniRef90_UPI001C029D7C	357.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0178817_16	742738.HMPREF9460_00856	279.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0178817_16	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0178817_16	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0178817_16	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0178817_17	K03496	184.9	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0178817_17	phrog_164	141.0	8.80015e-42	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178817_17	UniRef90_UPI000318E277	294.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0178817_17	1007096.BAGW01000033_gene1614	285.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-0178817_17	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0178817_17	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0178817_17	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0178817_19	K02314	253.8	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0178817_19	phrog_19	228.7	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178817_19	UniRef90_A0A1Y3ZTC3	290.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0178817_19	1226322.HMPREF1545_00095	282.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0178817_19	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0178817_19	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0178817_19	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0178817_19	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_20	phrog_270	102.6	5.9e-30	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178817_20	UniRef90_UPI00195D2180	143.0	6.11e-38	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0178817_20	742738.HMPREF9460_00851	144.0	2.23e-39	Helix-turn-helix domain	N/A
Pfam	UHGV-0178817_20	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0178817_20	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0178817_20	PF04182,NF040939,COG3355	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178817_22	PF21327	N/A	N/A	N/A	N/A
KOfam	UHGV-0178817_24	K22300	41.6	0.000000000022	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0178817_24	phrog_6499	121.7	3.2e-36	transcriptional regulator	transcription regulation
UniRef90	UHGV-0178817_24	UniRef90_G9YL68	140.0	1.06e-39	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0178817_24	742738.HMPREF9460_00847	140.0	1.23999e-40	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0178817_24	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0178817_24	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0178817_24	PF01381,MF_00535,NF040522,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0178817_25	K22300	60.9	3e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0178817_25	phrog_4836	42.2	0.000000000012	CII-like regulator	transcription regulation
UniRef90	UHGV-0178817_25	UniRef90_UPI000F0D19B9	54.3	0.0000000308	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0178817_25	1226322.HMPREF1545_02518	49.3	0.00000437	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0178817_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0178817_25	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0178817_25	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0178817_27	K02342	179.4	0	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0178817_27	phrog_192	157.3	0	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178817_27	UniRef90_UPI001897CA3A	275.0	0	exonuclease	N/A
eggNOG-mapper	UHGV-0178817_27	1437608.BBIA_1844	254.0	0	Exonuclease, DNA polymerase III, epsilon subunit family	N/A
PADLOC	UHGV-0178817_27	cd06127	133.8	1.6e-39	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0178817_27	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0178817_27	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
NCBIFam	UHGV-0178817_27	TIGR00573.1	N/A	N/A	exonuclease, DNA polymerase III, epsilon subunit family	N/A
COG	UHGV-0178817_27	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0178817_27	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
UniRef90	UHGV-0178817_28	UniRef90_A0A1Y3ZIV9	90.9	1.58e-21	HTH cro/C1-type domain-containing protein	N/A
COG	UHGV-0178817_28	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0178817_28	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178817_30	1262449.CP6013_2082	169.0	0	N/A	N/A
structural_annotation	UHGV-0178817_30	PF11631,TIGR03066	N/A	N/A	N/A	N/A
KOfam	UHGV-0178817_31	K14059	146.5	3.09687e-43	int; integrase	N/A
PHROG	UHGV-0178817_31	phrog_1	149.5	2.66247e-44	integrase	integration and excision
UniRef90	UHGV-0178817_31	UniRef90_UPI001EDEB0AD	290.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0178817_31	1226322.HMPREF1545_00144	228.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0178817_31	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0178817_31	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0178817_31	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_32	phrog_25567	56.5	4.2e-16	N/A	unknown function
UniRef90	UHGV-0178817_32	UniRef90_UPI00164AED9E	125.0	3.02e-35	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0178817_32	1235798.C817_04600	97.8	6.06e-25	N/A	N/A
Pfam	UHGV-0178817_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0178817_32	NF040522,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-0178817_36	K01448	49.1	0.000000000000082	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0178817_36	phrog_435	69.8	5.6e-20	endolysin	lysis
UniRef90	UHGV-0178817_36	UniRef90_A0A810PUG7	196.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0178817_36	411473.RUMCAL_02267	88.2	1.58e-17	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0178817_36	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0178817_36	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0178817_36	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0178817_36	PF01520,PF01471,MF_00562,TIGR02883,TIGR03979,COG0860,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_37	phrog_881	88.2	4.8e-26	holin	lysis
UniRef90	UHGV-0178817_37	UniRef90_UPI00189D3A4F	87.0	6.11e-21	phage holin	N/A
eggNOG-mapper	UHGV-0178817_37	742740.HMPREF9474_02251	83.6	2.68e-20	Putative phage holin Dp-1	N/A
Pfam	UHGV-0178817_37	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0178817_37	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_38	phrog_4105	99.3	2.5e-29	N/A	unknown function
UniRef90	UHGV-0178817_38	UniRef90_A0A8D9UHA9	168.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-0178817_38	411460.RUMTOR_01326	144.0	9.24857e-44	N/A	N/A
structural_annotation	UHGV-0178817_39	PF03426,NF033675	N/A	N/A	N/A	N/A
Pfam	UHGV-0178817_41	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0178817_42	phrog_1067	271.5	0	minor head protein	head and packaging
UniRef90	UHGV-0178817_42	UniRef90_A0A316NPB5	385.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0178817_42	1123263.AUKY01000068_gene489	291.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0178817_42	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0178817_42	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0178817_42	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0178817_42	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_43	phrog_33	67.0	4.9e-19	distal tail protein Dit	tail
UniRef90	UHGV-0178817_43	UniRef90_A0A173Z1X4	180.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0178817_43	536233.CLO_0897	92.4	5.52e-20	tail component	N/A
COG	UHGV-0178817_43	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0178817_43	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_44	phrog_3981	254.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0178817_44	UniRef90_A0A7X8M4B4	297.0	0	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-0178817_44	1216932.CM240_0625	324.0	0	tape measure	N/A
COG	UHGV-0178817_44	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0178817_44	PF05537,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_47	phrog_88	96.1	4e-28	major tail protein	tail
UniRef90	UHGV-0178817_47	UniRef90_A0A1C6CIL7	135.0	1.94e-35	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0178817_47	33035.JPJF01000039_gene278	73.9	0.000000000000151	N/A	N/A
NCBIFam	UHGV-0178817_47	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0178817_47	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_48	phrog_5	46.4	0.00000000000089	tail completion or Neck1 protein	connector
UniRef90	UHGV-0178817_48	UniRef90_R6UNR2	137.0	3.07e-38	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0178817_48	908340.HMPREF9406_2573	137.0	5.15e-39	N/A	N/A
structural_annotation	UHGV-0178817_48	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178817_49	999413.HMPREF1094_02005	82.4	7.89e-19	N/A	N/A
structural_annotation	UHGV-0178817_49	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_50	phrog_19734	118.8	3.4e-35	N/A	unknown function
UniRef90	UHGV-0178817_50	UniRef90_A0A6I7GNS7	129.0	7.17e-36	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0178817_50	1235798.C817_04587	57.8	0.00000000496	N/A	N/A
structural_annotation	UHGV-0178817_50	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_51	phrog_749	67.7	1.5e-19	N/A	unknown function
UniRef90	UHGV-0178817_51	UniRef90_UPI001C0FB8A8	52.8	0.000000693	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0178817_51	349161.Dred_2603	79.3	5.47e-18	N/A	N/A
PHROG	UHGV-0178817_52	phrog_10	140.7	1.6e-41	major head protein	head and packaging
UniRef90	UHGV-0178817_52	UniRef90_G9YSC0	691.0	0	Cadherin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0178817_52	1235792.C808_00086	420.0	0	Phage capsid family	N/A
Pfam	UHGV-0178817_52	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0178817_52	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0178817_52	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0178817_52	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0178817_52	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0178817_53	K01358	133.9	1.7e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0178817_53	phrog_94	249.7	0	head maturation protease	head and packaging
UniRef90	UHGV-0178817_53	UniRef90_A0A1Y4BT12	355.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0178817_53	349161.Dred_2605	305.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0178817_53	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0178817_53	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0178817_53	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_54	phrog_12	114.1	4.8e-34	portal protein	head and packaging
UniRef90	UHGV-0178817_54	UniRef90_G9YSB8	513.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0178817_54	610130.Closa_0742	294.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0178817_54	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0178817_54	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0178817_54	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0178817_54	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_55	phrog_9	237.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0178817_55	UniRef90_UPI0018737C02	902.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0178817_55	1235792.C808_00083	595.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0178817_55	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0178817_55	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0178817_55	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0178817_55	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0178817_56	phrog_5110	58.3	1.1e-16	terminase small subunit	head and packaging
UniRef90	UHGV-0178817_56	UniRef90_UPI00195E8788	120.0	1.75e-31	P27 family phage terminase small subunit	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0178817	Yes	34,440	60	100	1