Viral OTU vOTU-067399

vOTU: vOTU-067399

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-067399
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-01112 → vGENUS-04050 → vSUBGEN-40553 → vOTU-067399
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-2040277
Biosample ID	SAMN05971530
Length	38,027 bps
CheckV Completeness	99.99% (High-quality)
CDS Count	65
CDS Density	86.07%
tRNA Count	2
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.99)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2040277_2	phrog_4980	42.6	0.0000000000091	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
structural_annotation	UHGV-2040277_2	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
KOfam	UHGV-2040277_4	K22300	45.0	0.000000000002	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2040277_4	phrog_8	41.3	0.0000000000076	transcriptional regulator	transcription regulation
UniRef90	UHGV-2040277_4	UniRef90_A0A1C6GUM5	236.0	0	Predicted transcriptional regulator	N/A
eggNOG-mapper	UHGV-2040277_4	665956.HMPREF1032_00148	95.1	1.7e-23	N/A	N/A
Pfam	UHGV-2040277_4	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-2040277_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2040277_4	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-2040277_11	K22300	55.8	0.000000000000001	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2040277_11	phrog_8	75.3	1e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-2040277_11	UniRef90_A0A372WZL5	105.0	2.28e-28	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2040277_11	1029718.SFBM_0096	81.3	1.58e-19	sequence-specific DNA binding	N/A
Pfam	UHGV-2040277_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2040277_11	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2040277_11	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-2040277_12	K07729	54.4	0.0000000000000028	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-2040277_12	phrog_8	44.0	0.0000000000049	transcriptional regulator	transcription regulation
UniRef90	UHGV-2040277_12	UniRef90_A0A372WXU8	71.6	0.00000000000000276	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2040277_12	768486.EHR_02755	63.2	0.00000000000113	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2040277_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2040277_12	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2040277_12	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-2040277_17	phrog_14970	236.5	0	N/A	unknown function
UniRef90	UHGV-2040277_17	UniRef90_UPI00164BFA28	203.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-2040277_17	1410632.JHWW01000001_gene1266	185.0	0	double-strand break repair protein	N/A
COG	UHGV-2040277_17	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-2040277_17	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-2040277_18	phrog_1389	74.0	1.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-2040277_18	1347392.CCEZ01000060_gene3269	99.4	1.25e-25	N/A	N/A
structural_annotation	UHGV-2040277_18	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
PHROG	UHGV-2040277_19	phrog_7566	84.2	9.4e-25	N/A	unknown function
UniRef90	UHGV-2040277_19	UniRef90_A0A371ATG2	57.4	0.0000000194	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-2040277_19	693746.OBV_25470	109.0	1.97e-29	N/A	N/A
KOfam	UHGV-2040277_20	K03111	147.6	1.20512e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2040277_20	phrog_44	146.6	1.30321e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2040277_20	UniRef90_A7VPP2	206.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2040277_20	428125.CLOLEP_00518	206.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-2040277_20	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2040277_20	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2040277_20	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2040277_20	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2040277_20	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2040277_22	phrog_16304	63.0	2.1e-18	N/A	unknown function
UniRef90	UHGV-2040277_22	UniRef90_A0A1C6HII5	364.0	0	N/A	N/A
eggNOG-mapper	UHGV-2040277_22	1507.HMPREF0262_00303	63.9	0.00000000112	DnaD domain protein	N/A
Pfam	UHGV-2040277_22	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-2040277_22	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-2040277_23	K02315	124.1	1.5e-36	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-2040277_23	phrog_50	123.3	2.4e-36	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2040277_23	UniRef90_A0A1C6HFV4	496.0	0	DNA replication protein	N/A
eggNOG-mapper	UHGV-2040277_23	445972.ANACOL_01829	261.0	0	N/A	N/A
Pfam	UHGV-2040277_23	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-2040277_23	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-2040277_23	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-2040277_24	K01160	46.9	0.00000000000074	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-2040277_24	phrog_140	106.8	1.8e-31	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2040277_24	UniRef90_A0A1C6HG31	284.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-2040277_24	411461.DORFOR_00015	118.0	6.26e-32	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-2040277_24	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2040277_24	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-2040277_24	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-2040277_27	phrog_1384	128.0	6.1e-38	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-2040277_27	428125.CLOLEP_01816	319.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-2040277_27	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-2040277_28	phrog_22543	42.8	0.0000000000055	N/A	unknown function
UniRef90	UHGV-2040277_30	UniRef90_UPI001C3A10B1	61.2	0.00000000135	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-2040277_30	742738.HMPREF9460_04055	65.1	0.00000000000472	N/A	N/A
PHROG	UHGV-2040277_31	phrog_924	43.5	0.0000000000046	N/A	unknown function
UniRef90	UHGV-2040277_31	UniRef90_A0A412AV74	174.0	0	N/A	N/A
eggNOG-mapper	UHGV-2040277_31	1316932.MHH_c17560	53.1	0.00000103	N/A	N/A
Pfam	UHGV-2040277_31	PF04448	N/A	N/A	N/A	DUF551
UniRef90	UHGV-2040277_35	UniRef90_UPI001D08D6B6	88.2	1.1e-19	DNA-packaging protein	N/A
UniRef90	UHGV-2040277_39	UniRef90_A0A7C6Y3R2	70.9	0.0000000000000201	Helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-2040277_39	PF20075,TIGR03070	N/A	N/A	N/A	N/A
KOfam	UHGV-2040277_40	K14060	145.8	3.29305e-43	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-2040277_40	phrog_125	151.2	5.60519e-45	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2040277_40	UniRef90_UPI00164CEC80	208.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-2040277_40	1408423.JHYA01000001_gene988	180.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-2040277_40	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-2040277_40	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
COG	UHGV-2040277_40	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-2040277_40	PF00239,PF02796,MF_00489,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-2040277_41	phrog_38	184.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-2040277_41	UniRef90_A0A318EQM2	436.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-2040277_41	1123263.AUKY01000015_gene1608	483.0	0	chromosome segregation	N/A
NCBIFam	UHGV-2040277_41	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-2040277_41	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2040277_41	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-2040277_43	phrog_64	164.3	0	portal protein	head and packaging
UniRef90	UHGV-2040277_43	UniRef90_A0A3D3Y472	323.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2040277_43	1123263.AUKY01000015_gene1609	282.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-2040277_43	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2040277_43	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2040277_45	phrog_422	263.3	0	major head protein	head and packaging
eggNOG-mapper	UHGV-2040277_45	645991.Sgly_0340	232.0	0	N/A	N/A
structural_annotation	UHGV-2040277_45	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-2040277_47	UniRef90_UPI001D07B1DB	141.0	1.13996e-41	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-2040277_47	936580.HMPREF1516_0716	59.7	0.000000000292	N/A	N/A
Pfam	UHGV-2040277_47	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-2040277_47	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2040277_48	1232453.BAIF02000058_gene1630	69.7	0.000000000000157	N/A	N/A
eggNOG-mapper	UHGV-2040277_49	476272.RUMHYD_01963	71.6	0.00000000000027	N/A	N/A
structural_annotation	UHGV-2040277_50	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2040277_51	1121333.JMLH01000047_gene1013	175.0	0	N/A	N/A
structural_annotation	UHGV-2040277_51	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-2040277_52	UniRef90_A0A843HLA7	118.0	3.98e-32	N/A	N/A
Pfam	UHGV-2040277_52	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-2040277_52	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2040277_53	1121333.JMLH01000047_gene1011	58.5	0.0000000017	N/A	N/A
PHROG	UHGV-2040277_54	phrog_1535	157.3	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-2040277_54	1121866.AUGK01000003_gene1437	224.0	0	phage tail tape measure protein	N/A
COG	UHGV-2040277_54	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-2040277_55	phrog_13879	275.2	0	N/A	unknown function
eggNOG-mapper	UHGV-2040277_55	1304866.K413DRAFT_0774	58.2	0.00000994	N/A	N/A
structural_annotation	UHGV-2040277_55	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-2040277_56	phrog_18725	45.2	0.0000000000012	N/A	unknown function
eggNOG-mapper	UHGV-2040277_56	665956.HMPREF1032_02705	101.0	1.1e-25	N/A	N/A
eggNOG-mapper	UHGV-2040277_57	742740.HMPREF9474_03518	59.7	0.00000000838	N/A	N/A
UniRef90	UHGV-2040277_58	UniRef90_R6NDD3	97.4	3.39e-25	Glycosyl hydrolase family 25	N/A
structural_annotation	UHGV-2040277_58	PF02796,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-2040277_59	K07273	223.5	0	acm; lysozyme	N/A
PHROG	UHGV-2040277_59	phrog_291	173.5	0	endolysin	lysis
UniRef90	UHGV-2040277_59	UniRef90_A0A1C5NS63	297.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-2040277_59	428125.CLOLEP_00561	319.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-2040277_59	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-2040277_59	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2040277_59	PF01183,TIGR04303,COG3757,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-2040277_60	phrog_1863	87.4	7.4e-26	N/A	unknown function
UniRef90	UHGV-2040277_60	UniRef90_A0A2K9NYV1	88.2	2e-21	Holin	N/A
eggNOG-mapper	UHGV-2040277_60	428125.CLOLEP_01781	124.0	1.92e-36	N/A	N/A
PHROG	UHGV-2040277_61	phrog_297	55.4	0.000000000000001	holin	lysis
UniRef90	UHGV-2040277_61	UniRef90_A7VT88	181.0	0	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-2040277_61	428125.CLOLEP_00169	183.0	0	COG COG5546 Small integral membrane protein	N/A
Pfam	UHGV-2040277_61	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-2040277_61	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-2040277_61	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2040277_61	COG5546	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2040277_63	428125.CLOLEP_01917	89.0	7.66e-21	N/A	N/A
KOfam	UHGV-2040277_64	K03657	728.7	0	uvrD, pcrA; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]	N/A
PHROG	UHGV-2040277_64	phrog_1967	440.8	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2040277_64	UniRef90_A0A1C5YIE6	1435.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-2040277_64	428125.CLOLEP_01918	1433.0	0	ATP-dependent DNA helicase	N/A
PADLOC	UHGV-2040277_64	drt-cluster22	401.6	0	DRT	DRT
Pfam	UHGV-2040277_64	PF00580	N/A	N/A	UvrD/REP helicase N-terminal domain	UvrD-helicase
Pfam	UHGV-2040277_64	PF13361	N/A	N/A	UvrD-like helicase C-terminal domain	UvrD_C
Pfam	UHGV-2040277_64	PF21196	N/A	N/A	PcrA/UvrD tudor domain	PcrA_UvrD_tudor
COG	UHGV-2040277_64	COG0210	N/A	N/A	Superfamily I DNA or RNA helicase	N/A
structural_annotation	UHGV-2040277_64	PF00580,PF13361,PF12073,MF_01920,NF008743,COG0210	N/A	N/A	N/A	N/A
KOfam	UHGV-2040277_65	K07729	64.7	1.8e-18	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-2040277_65	phrog_8	57.4	3.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-2040277_65	UniRef90_A7VTM9	310.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-2040277_65	428125.CLOLEP_01922	310.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2040277_65	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2040277_65	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2040277	Yes	38,027	45	100	1
UHGV-2139029	No	16,421	47	43	1
UHGV-0156703	No	11,800	42	34	1