Viral OTU vOTU-069255

vOTU: vOTU-069255

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-069255
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00751 → vGENUS-00991 → vSUBGEN-38828 → vOTU-069255
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Limivicinus
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0020134
Biosample ID	N/A
Length	40,695 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	52
CDS Density	96.41%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0020134_1	K03496	100.3	2.8e-29	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0020134_1	phrog_164	74.8	1.3e-21	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020134_1	UniRef90_A0A845R968	216.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0020134_1	742738.HMPREF9460_00854	138.0	2.83e-38	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-0020134_1	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0020134_1	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0020134_1	PF13614,MF_00533,NF041546,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0020134_2	K03497	83.1	4.8e-24	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0020134_2	phrog_27290	330.2	0	N/A	unknown function
UniRef90	UHGV-0020134_2	UniRef90_G4L1G7	297.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0020134_2	693746.OBV_19860	297.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0020134_2	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0020134_2	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0020134_2	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0020134_3	phrog_3136	123.4	8.8e-37	N/A	unknown function
UniRef90	UHGV-0020134_3	UniRef90_UPI001A9A8D4F	122.0	9.44e-32	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0020134_3	1007096.BAGW01000031_gene120	76.3	0.000000000000024	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0020134_3	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0020134_3	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-0020134_5	K19779	44.3	0.0000000000026	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	N/A
PHROG	UHGV-0020134_5	phrog_599	52.4	0.000000000000011	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0020134_5	56780.SYN_03368	48.1	0.00000106	translation initiation factor activity	N/A
Pfam	UHGV-0020134_5	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0020134_5	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-0020134_5	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
COG	UHGV-0020134_5	COG1601	N/A	N/A	Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain	N/A
structural_annotation	UHGV-0020134_5	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0020134_7	phrog_3584	158.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0020134_7	1226322.HMPREF1545_03841	249.0	0	N/A	N/A
structural_annotation	UHGV-0020134_7	PF01446,NF041486	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020134_10	UniRef90_A0A3C0NNN3	68.9	0.0000000000189	HTH psq-type domain-containing protein	N/A
KOfam	UHGV-0020134_11	K06909	139.4	3.30006e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0020134_11	phrog_979	140.4	7.42688e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0020134_11	UniRef90_A0A3C0NMI6	700.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0020134_11	1410650.JHWL01000003_gene2834	593.0	0	N/A	N/A
Pfam	UHGV-0020134_11	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0020134_11	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0020134_11	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0020134_12	phrog_156	280.5	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0020134_12	1410650.JHWL01000003_gene2833	489.0	0	N/A	N/A
structural_annotation	UHGV-0020134_12	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0020134_13	K07584	55.4	0.0000000000000013	N/A	N/A
PHROG	UHGV-0020134_13	phrog_4478	51.1	0.000000000000018	peptidase	other
UniRef90	UHGV-0020134_13	UniRef90_A0A2N6APL4	52.4	0.00000171	Ribosomal-processing cysteine protease Prp	N/A
Pfam	UHGV-0020134_13	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0020134_13	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020134_13	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020134_14	1410650.JHWL01000003_gene2815	134.0	1.09e-32	N/A	N/A
PHROG	UHGV-0020134_15	phrog_22978	578.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0020134_15	1410650.JHWL01000003_gene2814	355.0	0	N/A	N/A
Pfam	UHGV-0020134_15	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
PHROG	UHGV-0020134_16	phrog_13908	176.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0020134_16	748224.HMPREF9436_01398	61.2	0.000000154	Cysteine protease Prp	N/A
COG	UHGV-0020134_16	COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0020134_17	phrog_1357	218.7	0	major head protein	head and packaging
UniRef90	UHGV-0020134_17	UniRef90_A0A2V2CFL5	540.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0020134_17	1410650.JHWL01000003_gene2830	266.0	0	N/A	N/A
Pfam	UHGV-0020134_17	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0020134_17	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0020134_17	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0020134_19	phrog_12105	98.9	4.1e-29	N/A	unknown function
eggNOG-mapper	UHGV-0020134_19	1519439.JPJG01000060_gene1891	68.6	0.000000000000405	N/A	N/A
PHROG	UHGV-0020134_20	phrog_511	236.0	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0020134_20	1410650.JHWL01000003_gene2827	355.0	0	N/A	N/A
structural_annotation	UHGV-0020134_20	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
KOfam	UHGV-0020134_22	K16628	190.3	0	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0020134_22	phrog_5073	86.1	0	tail fiber protein	tail
eggNOG-mapper	UHGV-0020134_22	1408422.JHYF01000026_gene3527	95.1	5.39e-20	nuclear chromosome segregation	N/A
Pfam	UHGV-0020134_22	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0020134_22	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0020134_22	PF10651,NF033814	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020134_23	PF21253,PF07210,NF038128,TIGR03000,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-0020134_26	phrog_30034	97.1	2.3e-28	N/A	unknown function
UniRef90	UHGV-0020134_26	UniRef90_A0A2Y9CAD1	142.0	3.09995e-41	Carbohydrate binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0020134_26	411460.RUMTOR_02099	119.0	1.99e-31	N/A	N/A
Pfam	UHGV-0020134_26	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0020134_26	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0020134_28	phrog_14030	158.7	0	N/A	unknown function
UniRef90	UHGV-0020134_28	UniRef90_A0A316NTC6	192.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0020134_28	1121115.AXVN01000051_gene809	177.0	0	NLP P60 protein	N/A
Pfam	UHGV-0020134_28	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0020134_28	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0020134_28	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0020134_28	PF01471,PF05382,NF038080,NF033742,COG3409,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0020134_29	phrog_199	66.6	2.9e-19	holin	lysis
UniRef90	UHGV-0020134_29	UniRef90_A0A3C0NPD5	184.0	0	Holin	N/A
eggNOG-mapper	UHGV-0020134_29	742738.HMPREF9460_00365	149.0	5.60519e-44	Bacteriophage holin family	N/A
Pfam	UHGV-0020134_29	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0020134_29	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0020134_29	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0020134_29	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020134_30	PF16509,MF_00674,NF008895,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020134_33	UniRef90_A0A7M1RS47	59.7	0.0000000269	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0020134_33	1408437.JNJN01000043_gene801	67.0	0.0000000000189	N/A	N/A
KOfam	UHGV-0020134_34	K14059	132.7	4.5e-39	int; integrase	N/A
PHROG	UHGV-0020134_34	phrog_1	138.4	5.70006e-41	integrase	integration and excision
UniRef90	UHGV-0020134_34	UniRef90_A0A2Z4QB94	275.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0020134_34	1514668.JOOA01000001_gene242	142.0	1.91e-36	Phage integrase family	N/A
Pfam	UHGV-0020134_34	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0020134_34	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0020134_34	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020134_35	PF13560,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0020134_37	K22300	51.0	0.000000000000028	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0020134_37	phrog_4	41.7	0.000000000023	transcriptional repressor	transcription regulation
UniRef90	UHGV-0020134_37	UniRef90_E2ZIF0	122.0	4.07e-33	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0020134_37	748224.HMPREF9436_01444	122.0	6.82e-34	N/A	N/A
Pfam	UHGV-0020134_37	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0020134_37	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0020134_37	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020134_38	1280679.ATVX01000003_gene3145	74.7	0.0000000000000424	neuron death in response to oxidative stress	N/A
COG	UHGV-0020134_38	COG1864	N/A	N/A	DNA/RNA endonuclease G, NUC1	N/A
PHROG	UHGV-0020134_47	phrog_824	151.6	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0020134_47	UniRef90_A0A6N8GXS9	172.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0020134_47	665956.HMPREF1032_00132	155.0	0	VRR_NUC	N/A
Pfam	UHGV-0020134_47	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
PHROG	UHGV-0020134_48	phrog_24518	71.9	8.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0020134_48	693746.OBV_25370	95.9	5.58e-22	N/A	N/A
KOfam	UHGV-0020134_49	K00390	102.5	4.4e-30	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0020134_49	phrog_424	122.1	4.2e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0020134_49	UniRef90_A0A1Y4LU27	349.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-0020134_49	411902.CLOBOL_06768	329.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-0020134_49	BrxP_00001	63.8	1.2e-19	BrxP	BREX
Pfam	UHGV-0020134_49	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0020134_49	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0020134_49	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020134_50	1232449.BAHV02000016_gene1829	115.0	2.61e-31	N/A	N/A
PHROG	UHGV-0020134_52	phrog_3136	80.5	2e-23	N/A	unknown function
Pfam	UHGV-0020134_52	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0020134_52	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0020134	Yes	40,695	56	100	1