Viral OTU vOTU-069934

vOTU: vOTU-069934

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-069934
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00102 → vSUBFAM-02958 → vGENUS-05730 → vSUBGEN-17152 → vOTU-069934
Host Lineage	Bacteria → Firmicutes_A → Clostridia → UBA1381 → UBA1381 → UBA4716 → ERR7745815_bin.290
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-2184508
Biosample ID	SAMEA3708874
Length	50,678 bps
CheckV Completeness	96.06% (High-quality)
CDS Count	68
CDS Density	95.25%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 96.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2184508_1	phrog_14242	62.9	3.1e-18	major head protein	head and packaging
UniRef90	UHGV-2184508_1	UniRef90_A0A355JD53	191.0	0	Phage major capsid protein	N/A
PHROG	UHGV-2184508_3	phrog_156	136.0	8.00001e-41	portal protein	head and packaging
eggNOG-mapper	UHGV-2184508_3	588581.Cpap_1526	356.0	0	N/A	N/A
structural_annotation	UHGV-2184508_3	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
UniRef90	UHGV-2184508_5	UniRef90_A0A7X6VKT0	52.8	0.00000141	C2H2-type domain-containing protein	N/A
KOfam	UHGV-2184508_6	K06909	146.6	2.10195e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2184508_6	phrog_979	176.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-2184508_6	UniRef90_A0A355JD48	640.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-2184508_6	1232449.BAHV02000016_gene1824	450.0	0	N/A	N/A
Pfam	UHGV-2184508_6	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-2184508_6	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2184508_6	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-2184508_7	UniRef90_UPI0014940E84	62.0	0.0000000164	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2184508_7	1449126.JQKL01000046_gene2071	60.1	0.00000000568	N/A	N/A
structural_annotation	UHGV-2184508_7	PF06056,COG2963	N/A	N/A	N/A	N/A
PHROG	UHGV-2184508_8	phrog_36	67.2	2.7e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-2184508_8	UniRef90_K9EW35	59.3	0.0000000177	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-2184508_8	469618.FVAG_00790	66.6	0.0000000000039	N/A	N/A
Pfam	UHGV-2184508_8	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-2184508_8	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-2184508_8	PF07374,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-2184508_13	phrog_1934	120.1	1.1e-35	N/A	unknown function
UniRef90	UHGV-2184508_13	UniRef90_UPI001430C6F2	157.0	0	zinc-finger-containing protein	N/A
eggNOG-mapper	UHGV-2184508_13	397290.C810_01488	169.0	0	zinc-finger-containing domain	N/A
Pfam	UHGV-2184508_13	PF11672	N/A	N/A	zinc-finger-containing domain	DUF3268
structural_annotation	UHGV-2184508_13	PF11672	N/A	N/A	N/A	N/A
dbAPIS	UHGV-2184508_15	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-2184508_15	PF14354	N/A	N/A	N/A	N/A
PHROG	UHGV-2184508_17	phrog_2118	88.7	8.4e-26	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2184508_17	UniRef90_A0A329UES5	105.0	2.12e-26	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-2184508_17	1291050.JAGE01000001_gene468	99.0	3.62e-25	endonuclease activity	N/A
Pfam	UHGV-2184508_17	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-2184508_17	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-2184508_17	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-2184508_18	phrog_8684	89.6	3e-26	N/A	unknown function
UniRef90	UHGV-2184508_18	UniRef90_A0A349YR03	102.0	4.52e-25	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-2184508_18	742735.HMPREF9467_00920	73.2	0.0000000000000173	YopX protein	N/A
Pfam	UHGV-2184508_18	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-2184508_18	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-2184508_18	PF09643,TIGR01671	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2184508_19	PF18300,MF_01549,NF007981	N/A	N/A	N/A	N/A
PHROG	UHGV-2184508_20	phrog_8684	78.0	1.1e-22	N/A	unknown function
UniRef90	UHGV-2184508_20	UniRef90_UPI000E4794A6	77.8	4.93e-16	YopX family protein	N/A
eggNOG-mapper	UHGV-2184508_20	1122605.KB893643_gene656	75.1	0.00000000000000176	YopX protein	N/A
Pfam	UHGV-2184508_20	PF09643	N/A	N/A	YopX protein	YopX
PHROG	UHGV-2184508_21	phrog_3136	136.6	7.89996e-41	N/A	unknown function
UniRef90	UHGV-2184508_21	UniRef90_UPI001CBCD733	133.0	2.5e-36	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-2184508_21	97139.C824_00742	65.5	0.0000000000351	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-2184508_21	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-2184508_21	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-2184508_22	phrog_419	79.2	1.1e-24	N/A	unknown function
UniRef90	UHGV-2184508_22	UniRef90_UPI0009BD6CEB	90.1	2.55e-20	N/A	N/A
eggNOG-mapper	UHGV-2184508_22	864563.HMPREF9166_1012	114.0	1.25e-31	N/A	N/A
Pfam	UHGV-2184508_22	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-2184508_22	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-2184508_27	phrog_15773	60.1	1.1e-26	N/A	unknown function
dbAPIS	UHGV-2184508_27	APIS008	N/A	N/A	Alphafold2 predicted that Gad2 is an enzyme with a nucleotidyltransferase protein domain, suggesting that it inhibits Gabija via a mechanism of action different than Gad1.	N/A
PHROG	UHGV-2184508_28	phrog_190	122.7	2.2e-36	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2184508_28	UniRef90_A0A7C6K533	126.0	4.6e-35	N/A	N/A
eggNOG-mapper	UHGV-2184508_28	1347392.CCEZ01000043_gene417	124.0	6.29e-35	N/A	N/A
Pfam	UHGV-2184508_28	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-2184508_28	PF06356,MF_04160,NF033179	N/A	N/A	N/A	N/A
KOfam	UHGV-2184508_30	K02086	67.8	1.4e-19	dnaD; DNA replication protein	N/A
PHROG	UHGV-2184508_30	phrog_186	96.0	4.9e-28	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2184508_30	UniRef90_A0A355JIQ4	91.7	1.19e-18	DnaB_2 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-2184508_30	762984.HMPREF9445_00153	70.1	0.0000000000242	DnaD domain protein	N/A
Pfam	UHGV-2184508_30	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-2184508_30	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-2184508_30	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-2184508_30	PF04492,MF_01911,NF040939,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-2184508_31	K03111	122.2	6.5e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2184508_31	phrog_44	130.4	1.3e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2184508_31	UniRef90_A0A1G6CA88	129.0	1.77e-35	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2184508_31	1410617.JHXH01000001_gene879	118.0	3.17e-32	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-2184508_31	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2184508_31	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2184508_31	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2184508_31	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2184508_31	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2184508_32	phrog_7566	100.7	7.2e-30	N/A	unknown function
UniRef90	UHGV-2184508_32	UniRef90_A0A8D9UHC0	131.0	3.54e-38	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-2184508_32	693746.OBV_24070	128.0	2.62e-37	N/A	N/A
PHROG	UHGV-2184508_33	phrog_72	64.4	1.2e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2184508_33	UniRef90_A0A8D9PDS2	163.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-2184508_33	445972.ANACOL_01825	124.0	6.22e-34	N/A	N/A
structural_annotation	UHGV-2184508_33	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-2184508_34	phrog_7838	140.7	6.39973e-42	exonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2184508_34	742767.HMPREF9456_02052	186.0	0	N/A	N/A
PHROG	UHGV-2184508_40	phrog_4973	52.5	0.0000000000000078	N/A	unknown function
Pfam	UHGV-2184508_40	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-2184508_40	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
Pfam	UHGV-2184508_44	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2184508_44	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-2184508_49	K22300	52.4	0.0000000000000056	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2184508_49	phrog_8	68.1	4.2e-20	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-2184508_49	1443125.Z962_p0007	77.4	0.0000000000000196	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2184508_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2184508_49	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-2184508_50	phrog_87	57.6	8.2e-17	metallo-protease	other
UniRef90	UHGV-2184508_50	UniRef90_A0A316PCB0	164.0	5.60519e-45	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-2184508_50	1121897.AUGO01000008_gene2514	60.8	0.00000000746	neuron death in response to oxidative stress	N/A
Pfam	UHGV-2184508_50	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-2184508_50	COG1864	N/A	N/A	DNA/RNA endonuclease G, NUC1	N/A
structural_annotation	UHGV-2184508_50	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-2184508_54	K06400	396.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-2184508_54	phrog_95	383.1	0	integrase	integration and excision
UniRef90	UHGV-2184508_54	UniRef90_R5EAU3	465.0	0	Resolvase domain protein	N/A
eggNOG-mapper	UHGV-2184508_54	903814.ELI_1010	456.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-2184508_54	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-2184508_54	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-2184508_54	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-2184508_54	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-2184508_54	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-2184508_55	phrog_15406	505.0	0	DNA methyltransferase	other
UniRef90	UHGV-2184508_55	UniRef90_UPI000785C7FA	307.0	0	SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-2184508_55	1121091.AUMP01000003_gene2597	308.0	0	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	N/A
PADLOC	UHGV-2184508_55	MTase_II_00044	45.4	0.00000000000049	Type II methyltransferase	RM
Pfam	UHGV-2184508_55	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
Pfam	UHGV-2184508_55	PF13489	N/A	N/A	Methyltransferase domain	Methyltransf_23
Pfam	UHGV-2184508_55	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-2184508_55	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-2184508_55	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
KOfam	UHGV-2184508_57	K19303	157.0	0	mepH; murein DD-endopeptidase [EC:3.4.-.-]	N/A
PHROG	UHGV-2184508_57	phrog_329	127.4	1.1e-37	minor tail protein	tail
eggNOG-mapper	UHGV-2184508_57	748727.CLJU_c01500	150.0	3.31e-38	NLP P60 protein	N/A
Pfam	UHGV-2184508_57	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-2184508_57	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-2184508_57	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
KOfam	UHGV-2184508_58	K01447	126.2	3.2e-37	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-2184508_58	phrog_670	136.0	3.4e-40	endolysin	lysis
UniRef90	UHGV-2184508_58	UniRef90_A0A416D4M7	278.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-2184508_58	97138.C820_00738	202.0	0	Ami_2	N/A
Pfam	UHGV-2184508_58	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-2184508_58	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-2184508_58	PF01510,PF14627,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-2184508_59	phrog_33625	62.2	6.3e-18	holin	lysis
UniRef90	UHGV-2184508_59	UniRef90_UPI000BB8CE84	131.0	5.19e-38	phage holin	N/A
eggNOG-mapper	UHGV-2184508_59	1196031.ALEG01000039_gene1391	115.0	2.01e-32	Bacteriophage holin	N/A
Pfam	UHGV-2184508_59	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-2184508_59	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-2184508_59	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2184508_59	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-2184508_60	phrog_1863	52.2	0.0000000000000059	N/A	unknown function
eggNOG-mapper	UHGV-2184508_60	755731.Clo1100_1178	79.3	3.46e-18	N/A	N/A
structural_annotation	UHGV-2184508_63	PF10618	N/A	N/A	N/A	N/A
PHROG	UHGV-2184508_65	phrog_511	66.3	2.5e-19	internal virion protein	head and packaging
eggNOG-mapper	UHGV-2184508_65	1449126.JQKL01000002_gene1688	134.0	5.29e-31	N/A	N/A
structural_annotation	UHGV-2184508_66	PF20387	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2184508	Yes	50,678	40	96	1
UHGV-0108282	No	22,322	41	42	1