Viral OTU vOTU-071212

vOTU: vOTU-071212

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-071212
Number of Genomes	6
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00033 → vGENUS-02310 → vSUBGEN-13200 → vOTU-071212
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1436134
Biosample ID	N/A
Length	32,261 bps
CheckV Completeness	93.44% (High-quality)
CDS Count	56
CDS Density	93.71%
tRNA Count	2
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.44)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1436134_1	748224.HMPREF9436_03320	62.4	0.00000000000361	Peptidase M15	N/A
COG	UHGV-1436134_1	COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_2	phrog_1382	45.5	0.00000000000057	N/A	unknown function
UniRef90	UHGV-1436134_2	UniRef90_A0A6N9P4T5	48.5	0.00000187	ASCH domain-containing protein	N/A
NCBIFam	UHGV-1436134_2	NF040910.1	N/A	N/A	CD1375 family protein	N/A
PHROG	UHGV-1436134_3	phrog_9534	256.9	0	head protein	head and packaging
eggNOG-mapper	UHGV-1436134_3	748224.HMPREF9436_00702	305.0	0	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-1436134_3	PF21567	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_4	phrog_538	140.2	1.19993e-41	minor tail protein	tail
UniRef90	UHGV-1436134_4	UniRef90_UPI001C0C4E4F	68.6	0.00000000324	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1436134_4	748224.HMPREF9436_03324	161.0	4.48416e-44	N/A	N/A
Pfam	UHGV-1436134_4	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1436134_4	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_5	phrog_33	58.8	1.3e-16	distal tail protein Dit	tail
UniRef90	UHGV-1436134_5	UniRef90_A0A564T4N7	386.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1436134_5	748224.HMPREF9436_00700	421.0	0	Phage tail protein	N/A
structural_annotation	UHGV-1436134_5	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_6	phrog_28775	328.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1436134_6	UniRef90_A0A564SVA6	349.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1436134_6	748224.HMPREF9436_00699	415.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1436134_6	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1436134_6	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1436134_6	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436134_6	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436134_7	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_8	phrog_1526	53.9	0.000000000000003	N/A	unknown function
eggNOG-mapper	UHGV-1436134_8	875454.BAEW01000017_gene1589	53.1	0.0000000526	N/A	N/A
PHROG	UHGV-1436134_9	phrog_117	177.8	0	major tail protein	tail
UniRef90	UHGV-1436134_9	UniRef90_E2ZGB2	294.0	0	Prophage LambdaSa1, structural protein	N/A
eggNOG-mapper	UHGV-1436134_9	748224.HMPREF9436_00696	294.0	0	domain, Protein	N/A
COG	UHGV-1436134_9	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436134_9	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_10	phrog_123	59.4	7.1e-17	tail terminator	connector
eggNOG-mapper	UHGV-1436134_10	748224.HMPREF9436_00695	109.0	1.95e-29	N/A	N/A
structural_annotation	UHGV-1436134_10	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_11	phrog_387	49.7	0.000000000000049	neck protein	connector
eggNOG-mapper	UHGV-1436134_11	748224.HMPREF9436_00694	145.0	4.2039e-44	N/A	N/A
PHROG	UHGV-1436134_12	phrog_501	77.7	1.4e-22	head closure Hc1	connector
UniRef90	UHGV-1436134_12	UniRef90_R6CEU4	127.0	8.59e-36	N/A	N/A
eggNOG-mapper	UHGV-1436134_12	748224.HMPREF9436_00693	190.0	0	N/A	N/A
structural_annotation	UHGV-1436134_12	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_13	phrog_137	65.0	9.4e-19	head-tail adaptor Ad1	connector
UniRef90	UHGV-1436134_13	UniRef90_E2ZGA8	220.0	0	Phage protein Gp19/Gp15/Gp42	N/A
eggNOG-mapper	UHGV-1436134_13	762211.BSTEL_0628	52.8	0.000000527	Phage protein Gp19/Gp15/Gp42	N/A
structural_annotation	UHGV-1436134_13	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_14	phrog_267	103.3	2.2e-30	major head protein	head and packaging
UniRef90	UHGV-1436134_14	UniRef90_A0A4P8IA69	382.0	0	Phage capsid and scaffold	N/A
eggNOG-mapper	UHGV-1436134_14	748224.HMPREF9436_03335	437.0	0	N/A	N/A
structural_annotation	UHGV-1436134_14	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_15	phrog_194	80.0	3.9e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-1436134_15	UniRef90_D4K444	233.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1436134_15	748224.HMPREF9436_03336	233.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-1436134_15	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1436134_15	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_16	phrog_478	128.4	2.9e-38	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-1436134_16	UniRef90_A0A373Q857	168.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1436134_16	1111121.HMPREF1247_0834	94.0	6.58e-23	N/A	N/A
PHROG	UHGV-1436134_18	phrog_193	128.1	7.7e-38	head maturation protease	head and packaging
UniRef90	UHGV-1436134_18	UniRef90_A0A6N8H118	310.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1436134_18	748224.HMPREF9436_01469	345.0	0	N/A	N/A
COG	UHGV-1436134_18	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
structural_annotation	UHGV-1436134_18	PF20344	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_19	phrog_104	202.6	0	portal protein	head and packaging
UniRef90	UHGV-1436134_19	UniRef90_A0A3E2U200	711.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1436134_19	748224.HMPREF9436_01468	744.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1436134_19	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_20	phrog_9	163.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-1436134_20	UniRef90_UPI001F1A3C47	620.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1436134_20	748224.HMPREF9436_01467	818.0	0	phage terminase, large subunit	N/A
Pfam	UHGV-1436134_20	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1436134_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1436134_20	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436134_21	UniRef90_R6GFM0	90.5	6.45e-22	Conserved domain protein	N/A
structural_annotation	UHGV-1436134_21	PF19962	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_22	phrog_338	58.2	1.7e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436134_22	UniRef90_UPI0015F33F36	214.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1436134_22	748224.HMPREF9436_01465	228.0	0	N/A	N/A
structural_annotation	UHGV-1436134_22	PF01844	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_23	phrog_36	79.8	3.7e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-1436134_23	UniRef90_A0A3E2U224	248.0	0	Sigma70_r4_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1436134_23	748224.HMPREF9436_01463	120.0	4.07e-33	N/A	N/A
Pfam	UHGV-1436134_23	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
structural_annotation	UHGV-1436134_23	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-1436134_24	K00571	89.9	2.8e-26	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1436134_24	phrog_23224	194.3	0	DNA methyltransferase	other
UniRef90	UHGV-1436134_24	UniRef90_A0A2V2GM11	385.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1436134_24	718252.FP2_06750	370.0	0	DNA methylase	N/A
PADLOC	UHGV-1436134_24	MTase_II_00172	81.2	2.8e-25	Type II methyltransferase	RM
Pfam	UHGV-1436134_24	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1436134_24	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1436134_24	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-1436134_26	K02314	196.4	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1436134_26	phrog_19	212.9	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436134_26	UniRef90_A0A564SBR1	702.0	0	Replicative DNA helicase	N/A
eggNOG-mapper	UHGV-1436134_26	1203606.HMPREF1526_01325	169.0	4.2039e-45	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-1436134_26	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1436134_26	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1436134_26	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_27	phrog_15768	86.6	3.6e-25	N/A	unknown function
UniRef90	UHGV-1436134_27	UniRef90_A0A3E2U1Y3	114.0	6.53e-27	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1436134_27	929704.Myrod_0677	74.3	0.000000000000555	N/A	N/A
Pfam	UHGV-1436134_27	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-1436134_27	PF01978,MF_01819,TIGR01610,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-1436134_28	K03111	139.4	3.89995e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1436134_28	phrog_44	137.6	7.80005e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436134_28	UniRef90_A0A3E2U1Y5	293.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1436134_28	748224.HMPREF9436_00638	211.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1436134_28	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1436134_28	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1436134_28	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1436134_28	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1436134_28	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_29	phrog_7566	73.4	2.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1436134_29	411471.SUBVAR_05830	97.8	4.06e-25	N/A	N/A
PHROG	UHGV-1436134_32	phrog_72	55.0	0.0000000000000015	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1436134_32	411471.SUBVAR_05829	133.0	6.04e-37	N/A	N/A
structural_annotation	UHGV-1436134_32	PF05772,NF007281	N/A	N/A	N/A	N/A
COG	UHGV-1436134_33	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1436134_33	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436134_34	NF033787	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436134_39	PF12270,NF040944	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436134_40	UniRef90_A0A2A7BGV7	76.6	1.11e-16	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1436134_40	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-1436134_40	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1436134_40	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436134_42	UniRef90_A0A396LZ12	119.0	3.72e-32	N/A	N/A
Pfam	UHGV-1436134_42	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-1436134_42	PF12957	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1436134_43	411462.DORLON_00804	53.9	0.0000000149	N/A	N/A
KOfam	UHGV-1436134_48	K07729	56.3	7.4e-16	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1436134_48	phrog_5823	48.4	0.00000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-1436134_48	UniRef90_A0A3E2U242	108.0	1.04e-29	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1436134_48	888060.HMPREF9081_1958	67.0	0.0000000000000446	Cro/C1-type HTH DNA-binding domain	N/A
PADLOC	UHGV-1436134_48	retron_type_VI_hth_cluster2_1	40.2	0.000000000091	N/A	Retron
Pfam	UHGV-1436134_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1436134_48	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1436134_49	K01356	159.8	0	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1436134_49	phrog_4	98.8	7.7e-29	transcriptional repressor	transcription regulation
UniRef90	UHGV-1436134_49	UniRef90_A0A3E2U313	370.0	0	Repressor LexA	N/A
eggNOG-mapper	UHGV-1436134_49	411483.FAEPRAA2165_03041	157.0	2.8026e-45	N/A	N/A
Pfam	UHGV-1436134_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1436134_49	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1436134_49	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1436134_49	PF00717,PF12844,MF_00015,TIGR00498,TIGR03070,COG1974,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_50	phrog_1847	522.9	0	N/A	unknown function
UniRef90	UHGV-1436134_50	UniRef90_A0A3E2U209	568.0	0	N/A	N/A
eggNOG-mapper	UHGV-1436134_50	718252.FP2_06880	546.0	0	N/A	N/A
Pfam	UHGV-1436134_50	PF13250	N/A	N/A	N/A	DUF4041
Pfam	UHGV-1436134_50	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-1436134_50	COG0172	N/A	N/A	Seryl-tRNA synthetase	N/A
structural_annotation	UHGV-1436134_50	PF13250,PF19824,MF_01506	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_51	phrog_2523	42.7	0.0000000000079	N/A	unknown function
structural_annotation	UHGV-1436134_51	PF05973,TIGR02683,COG4683	N/A	N/A	N/A	N/A
KOfam	UHGV-1436134_52	K23779	70.6	3.3e-20	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-1436134_52	phrog_1373	63.2	3.7e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1436134_52	UniRef90_UPI001CBC9967	195.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1436134_52	748224.HMPREF9436_03379	107.0	4.81e-28	sequence-specific DNA binding	N/A
PADLOC	UHGV-1436134_52	retron_type_VI_hth_cluster2_1	49.1	0.0000000000001	N/A	Retron
Pfam	UHGV-1436134_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1436134_52	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-1436134_53	UniRef90_A0A542AKI0	68.9	0.00000000000793	Preprotein translocase subunit SecB	N/A
eggNOG-mapper	UHGV-1436134_53	1280668.ATVT01000017_gene1594	68.9	0.000000000000585	N/A	N/A
structural_annotation	UHGV-1436134_53	PF02556,MF_00821,NF004392,COG1952	N/A	N/A	N/A	N/A
KOfam	UHGV-1436134_54	K14059	161.9	0	int; integrase	N/A
PHROG	UHGV-1436134_54	phrog_1	147.8	9.24857e-44	integrase	integration and excision
UniRef90	UHGV-1436134_54	UniRef90_A0A316RZQ6	538.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1436134_54	693746.OBV_25530	278.0	0	Phage integrase family	N/A
Pfam	UHGV-1436134_54	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1436134_54	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1436134_54	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1436134_56	phrog_17467	152.7	1.4013e-45	N/A	unknown function
UniRef90	UHGV-1436134_56	UniRef90_D4K5R8	248.0	0	Aconitase A	N/A
eggNOG-mapper	UHGV-1436134_56	657322.FPR_28230	248.0	0	aconitate hydratase	N/A
COG	UHGV-1436134_56	COG1048	N/A	N/A	Aconitase A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1436134	Yes	32,261	58	93	1
UHGV-0125719	No	31,569	58	91	1
UHGV-1336988	No	31,569	58	91	1
UHGV-1540419	No	30,984	58	90	1
UHGV-1787360	No	16,665	60	48	1
UHGV-0157958	No	13,663	58	40	1