Viral OTU vOTU-071616

vOTU: vOTU-071616

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-071616
Number of Genomes	12
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00027 → vGENUS-00359 → vSUBGEN-38268 → vOTU-071616
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1524379
Biosample ID	N/A
Length	36,116 bps
CheckV Completeness	94.49% (High-quality)
CDS Count	51
CDS Density	90.74%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 94.49)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1524379_1	phrog_918	117.4	4.4e-35	N/A	unknown function
UniRef90	UHGV-1524379_1	UniRef90_UPI00164AB9AF	124.0	1.54e-35	N/A	N/A
eggNOG-mapper	UHGV-1524379_1	1504823.CCMM01000008_gene1021	116.0	6.35e-33	N/A	N/A
Pfam	UHGV-1524379_1	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1524379_1	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_2	phrog_443	53.0	0.0000000000000096	holin	lysis
UniRef90	UHGV-1524379_2	UniRef90_R6R2Q3	84.0	6.12e-20	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1524379_2	1298920.KI911353_gene2669	79.3	7.11e-19	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1524379_2	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1524379_2	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_3	phrog_4105	80.2	2e-23	N/A	unknown function
eggNOG-mapper	UHGV-1524379_3	1291050.JAGE01000001_gene433	75.5	4.44e-16	N/A	N/A
structural_annotation	UHGV-1524379_4	PF10651,PF01095	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1524379_5	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_6	phrog_1194	75.5	6.1e-22	N/A	unknown function
UniRef90	UHGV-1524379_6	UniRef90_A0A8D9PDT1	99.0	4.77e-24	YolD-like protein	N/A
eggNOG-mapper	UHGV-1524379_6	1304866.K413DRAFT_3047	113.0	2.2e-30	N/A	N/A
Pfam	UHGV-1524379_6	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1524379_6	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_7	phrog_58	142.3	5.70328e-43	tail length tape measure protein	tail
UniRef90	UHGV-1524379_7	UniRef90_A0A2N0UYY1	1488.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1524379_7	1160721.RBI_II00528	340.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-1524379_7	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
structural_annotation	UHGV-1524379_7	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_8	phrog_5319	62.3	5e-18	outer membrane protein	other
UniRef90	UHGV-1524379_8	UniRef90_A0A1Q6JN93	370.0	0	zinc_ribbon_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1524379_8	1042156.CXIVA_15870	97.8	5.71e-21	sh3 domain protein	N/A
Pfam	UHGV-1524379_8	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
COG	UHGV-1524379_8	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1524379_8	PF03843,PF12773,MF_00984,TIGR00752,COG3065	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_9	phrog_8300	73.8	2.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1524379_9	1282664.H354_06701	70.1	0.0000000000000223	N/A	N/A
structural_annotation	UHGV-1524379_9	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_10	phrog_820	110.0	1.5e-32	major tail protein	tail
eggNOG-mapper	UHGV-1524379_10	1282664.H354_06691	174.0	0	N/A	N/A
structural_annotation	UHGV-1524379_10	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_11	phrog_2595	99.7	2.3e-29	head-tail connector protein	connector
UniRef90	UHGV-1524379_11	UniRef90_UPI001D0627B3	138.0	1.01e-39	minor capsid protein	N/A
eggNOG-mapper	UHGV-1524379_11	1123263.AUKY01000051_gene1075	149.0	7.00649e-45	N/A	N/A
Pfam	UHGV-1524379_11	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1524379_11	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_12	phrog_556	57.9	1.7e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-1524379_12	483218.BACPEC_01151	139.0	4.85998e-41	N/A	N/A
PHROG	UHGV-1524379_13	phrog_8710	151.3	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-1524379_13	33035.JPJF01000093_gene2249	114.0	3.66e-31	N/A	N/A
structural_annotation	UHGV-1524379_13	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1524379_14	483218.BACPEC_01153	94.4	1.82e-23	N/A	N/A
PHROG	UHGV-1524379_15	phrog_422	281.9	0	major head protein	head and packaging
UniRef90	UHGV-1524379_15	UniRef90_UPI001C03381A	489.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-1524379_15	445972.ANACOL_01845	382.0	0	N/A	N/A
structural_annotation	UHGV-1524379_15	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_16	phrog_2303	134.4	8.99999e-40	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1524379_16	1304866.K413DRAFT_0806	144.0	1.02001e-40	N/A	N/A
PHROG	UHGV-1524379_17	phrog_2616	44.4	0.0000000000035	N/A	unknown function
structural_annotation	UHGV-1524379_17	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_19	phrog_581	239.6	0	minor head protein	head and packaging
UniRef90	UHGV-1524379_19	UniRef90_A0A2N0UXT6	1130.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1524379_19	742740.HMPREF9474_03503	399.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1524379_19	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1524379_19	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1524379_19	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_20	phrog_533	257.1	0	portal protein	head and packaging
UniRef90	UHGV-1524379_20	UniRef90_A0A3D0XB31	917.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1524379_20	742740.HMPREF9474_03501	451.0	0	N/A	N/A
structural_annotation	UHGV-1524379_20	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1524379_21	K06909	110.5	1.8e-32	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1524379_21	phrog_2	78.3	1.5e-22	terminase large subunit	head and packaging
UniRef90	UHGV-1524379_21	UniRef90_A0A374N1S8	890.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1524379_21	1282664.H354_06621	640.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1524379_21	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1524379_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1524379_21	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1524379_22	K07474	85.1	1.7e-24	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1524379_22	phrog_51	88.4	6.9e-26	terminase small subunit	head and packaging
UniRef90	UHGV-1524379_22	UniRef90_A0A2N0UXP4	226.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1524379_22	1160721.RBI_II00483	107.0	4.16e-28	DNA packaging	N/A
Pfam	UHGV-1524379_22	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1524379_22	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1524379_22	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_23	phrog_3634	122.9	3.1e-36	N/A	unknown function
eggNOG-mapper	UHGV-1524379_23	411459.RUMOBE_00941	194.0	0	COG NOG22561 non supervised orthologous group	N/A
COG	UHGV-1524379_23	COG0457	N/A	N/A	Tetratricopeptide (TPR) repeat	N/A
structural_annotation	UHGV-1524379_23	PF10137,MF_03036,TIGR03646,COG4271	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_24	phrog_36	81.9	9.1e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-1524379_24	UniRef90_A0A2N0UXQ6	266.0	0	N/A	N/A
eggNOG-mapper	UHGV-1524379_24	1401067.HMPREF0872_06835	95.1	3.66e-23	N/A	N/A
Pfam	UHGV-1524379_24	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1524379_24	PF07374,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-1524379_25	UniRef90_UPI000E4DC4DA	135.0	4.4e-38	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-1524379_28	PF19824,MF_01506	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1524379_30	PF02559,MF_00667,TIGR02861	N/A	N/A	N/A	N/A
KOfam	UHGV-1524379_31	K01160	40.2	0.000000000085	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1524379_31	phrog_140	94.8	9.7e-28	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1524379_31	UniRef90_A0A2N0UXU6	258.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1524379_31	1235798.C817_03497	204.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1524379_31	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1524379_31	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1524379_31	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1524379_32	K07505	407.8	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-1524379_32	phrog_2597	1172.1	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1524379_32	UniRef90_A0A2N0UXP7	1443.0	0	Regulatory protein RepA	N/A
eggNOG-mapper	UHGV-1524379_32	394503.Ccel_3304	957.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-1524379_32	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-1524379_32	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1524379_32	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-1524379_32	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-1524379_33	K17677	363.0	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-1524379_33	phrog_16	295.9	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1524379_33	UniRef90_A0A412ULZ3	1046.0	0	ATP-dependent helicase	N/A
eggNOG-mapper	UHGV-1524379_33	1235792.C808_05388	840.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-1524379_33	mREase_IV_00005	132.9	2.7e-39	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1524379_33	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1524379_33	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1524379_33	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1524379_33	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_34	phrog_2698	176.4	0	N/A	unknown function
UniRef90	UHGV-1524379_34	UniRef90_UPI000F54335B	197.0	0	N/A	N/A
eggNOG-mapper	UHGV-1524379_34	742723.HMPREF9477_00927	138.0	3e-39	N/A	N/A
structural_annotation	UHGV-1524379_34	PF17426,NF005674	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_35	phrog_124	262.7	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1524379_35	UniRef90_A0A2N0UXR5	680.0	0	Phage nucleotide-binding protein	N/A
eggNOG-mapper	UHGV-1524379_35	1123304.AQYA01000037_gene196	424.0	0	AAA domain	N/A
Pfam	UHGV-1524379_35	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1524379_35	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-1524379_37	K03546	57.8	1.1e-16	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1524379_37	phrog_1499	480.4	0	N/A	unknown function
UniRef90	UHGV-1524379_37	UniRef90_A0A2N0UXU2	753.0	0	Chromosome segregation protein	N/A
eggNOG-mapper	UHGV-1524379_37	645991.Sgly_0320	504.0	0	domain protein	N/A
Pfam	UHGV-1524379_37	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1524379_37	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1524379_37	TIGR03185,COG5293	N/A	N/A	N/A	N/A
UniRef90	UHGV-1524379_39	UniRef90_A0A2N0ULT9	138.0	1.46996e-41	DNA binding domain, excisionase family	N/A
eggNOG-mapper	UHGV-1524379_39	1283300.ATXB01000001_gene1737	47.0	0.0000034	DNA excision	N/A
Pfam	UHGV-1524379_39	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1524379_39	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-1524379_39	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
structural_annotation	UHGV-1524379_39	PF12728,NF040990,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1524379_41	K15773	49.2	0.00000000000012	hipB; HTH-type transcriptional regulator / antitoxin HipB	N/A
PHROG	UHGV-1524379_41	phrog_3	48.1	0.0000000000005	transcriptional repressor	transcription regulation
UniRef90	UHGV-1524379_41	UniRef90_A0A374N3U7	132.0	5.39e-39	XRE family transcriptional regulator	N/A
Pfam	UHGV-1524379_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1524379_41	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1524379_41	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_42	phrog_1305	140.8	7.10038e-42	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1524379_42	UniRef90_A0A413K8G3	453.0	0	N/A	N/A
eggNOG-mapper	UHGV-1524379_42	445974.CLORAM_02962	174.0	0	N/A	N/A
structural_annotation	UHGV-1524379_42	COG2250	N/A	N/A	N/A	N/A
PHROG	UHGV-1524379_43	phrog_3882	42.5	0.0000000000078	N/A	unknown function
PHROG	UHGV-1524379_44	phrog_2439	40.4	0.000000000032	transcriptional regulator	transcription regulation
UniRef90	UHGV-1524379_44	UniRef90_A0A412UNI5	169.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1524379_44	1274524.BSONL12_05988	58.2	0.00000000038	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1524379_44	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1524379_44	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-1524379_45	phrog_2967	64.7	1.5e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1524379_45	UniRef90_A0A412UNH6	241.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1524379_45	861450.HMPREF0080_02022	86.3	7.04e-20	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-1524379_45	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1524379_45	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1524379_46	UniRef90_A0A374E958	64.7	0.00000000000311	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1524379_46	1232443.BAIA02000106_gene3117	71.2	0.00000000000000988	N/A	N/A
structural_annotation	UHGV-1524379_46	PF06114	N/A	N/A	N/A	N/A
UniRef90	UHGV-1524379_47	UniRef90_UPI001C00B95B	184.0	0	type II toxin-antitoxin system RelE/ParE family toxin	N/A
eggNOG-mapper	UHGV-1524379_47	293826.Amet_3134	62.8	0.000000000103	N/A	N/A
structural_annotation	UHGV-1524379_47	PF05973,TIGR02683,COG4683	N/A	N/A	N/A	N/A
KOfam	UHGV-1524379_48	K07729	45.4	0.0000000000017	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-1524379_48	UniRef90_A0A412UNZ9	250.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1524379_48	1280688.AUJB01000009_gene1936	89.0	7.24e-21	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1524379_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1524379_48	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
UniRef90	UHGV-1524379_49	UniRef90_UPI001D095173	91.7	1.12e-20	protein-export chaperone SecB	N/A
eggNOG-mapper	UHGV-1524379_49	1031288.AXAA01000014_gene407	55.8	0.000000115	Preprotein translocase subunit SecB	N/A
structural_annotation	UHGV-1524379_49	PF02556,MF_00821,NF004392,COG1952	N/A	N/A	N/A	N/A
KOfam	UHGV-1524379_50	K14059	208.7	0	int; integrase	N/A
PHROG	UHGV-1524379_50	phrog_1	184.5	0	integrase	integration and excision
UniRef90	UHGV-1524379_50	UniRef90_A0A2N0ULT2	789.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1524379_50	428125.CLOLEP_02743	313.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1524379_50	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1524379_50	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1524379_50	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1524379_51	33035.JPJF01000014_gene4811	54.3	0.00000000311	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1524379	Yes	36,116	41	94	1
UHGV-2127773	No	27,182	43	71	1
UHGV-1442482	No	17,760	43	50	1
UHGV-0384980	No	16,864	43	47	1
UHGV-1702931	No	19,160	40	47	1
UHGV-1758959	No	15,503	42	38	1
UHGV-1763156	No	15,398	42	38	1
UHGV-1774045	No	13,664	43	33	1
UHGV-0298286	No	12,116	43	30	1
UHGV-1622810	No	10,439	43	29	1
UHGV-1719040	No	10,438	43	29	1
UHGV-1630806	No	10,368	43	29	1