Viral OTU vOTU-072224

vOTU: vOTU-072224

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-072224
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00024 → vSUBFAM-01436 → vGENUS-01444 → vSUBGEN-07345 → vOTU-072224
Host Lineage	Bacteria → Actinobacteriota → Coriobacteriia → Coriobacteriales → Atopobiaceae → Lancefieldella → Lancefieldella sp000564995
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1544586
Biosample ID	N/A
Length	31,963 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	49
CDS Density	90.03%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1544586_2	K14059	197.4	0	int; integrase	N/A
PHROG	UHGV-1544586_2	phrog_1	199.4	0	integrase	integration and excision
UniRef90	UHGV-1544586_2	UniRef90_C8WA39	733.0	0	Integrase family protein	N/A
eggNOG-mapper	UHGV-1544586_2	521095.Apar_0546	733.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1544586_2	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-1544586_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1544586_2	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1544586_2	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1544586_4	UniRef90_A0A7C8FLC9	129.0	4.83e-35	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1544586_4	742722.HMPREF9463_00773	94.0	8.01e-22	Helix-turn-helix domain	N/A
COG	UHGV-1544586_4	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
KOfam	UHGV-1544586_5	K07339	42.4	0.000000000012	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-1544586_5	phrog_353	45.9	0.00000000000079	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1544586_5	UniRef90_R7CHJ8	53.5	0.0000000347	YcfA-like protein	N/A
eggNOG-mapper	UHGV-1544586_5	467661.RKLH11_129	53.9	0.00000000449	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-1544586_5	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
structural_annotation	UHGV-1544586_5	PF07927	N/A	N/A	N/A	N/A
KOfam	UHGV-1544586_6	K07504	75.1	1.2e-21	K07504; predicted type IV restriction endonuclease	N/A
PHROG	UHGV-1544586_6	phrog_17239	351.4	0	N/A	unknown function
UniRef90	UHGV-1544586_6	UniRef90_S2ZWU0	438.0	0	HSDR_N_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1544586_6	1203602.HMPREF1527_01117	438.0	0	type I restriction enzyme	N/A
Pfam	UHGV-1544586_6	PF13588	N/A	N/A	Type I restriction enzyme R protein N terminus (HSDR_N)	HSDR_N_2
COG	UHGV-1544586_6	COG4748	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1544586_6	PF13588,NF007086,COG4748	N/A	N/A	N/A	N/A
KOfam	UHGV-1544586_7	K07729	62.0	1.4e-17	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1544586_7	phrog_8	63.9	3.6e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1544586_7	UniRef90_A0A1H8UA50	66.2	0.0000000000062	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-1544586_7	471855.Shel_15940	60.8	0.000000000145	sequence-specific DNA binding	N/A
Pfam	UHGV-1544586_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1544586_7	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-1544586_8	phrog_8	44.7	0.0000000000032	transcriptional regulator	transcription regulation
Pfam	UHGV-1544586_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1544586_8	PF01381,NF007257,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1544586_10	K07741	74.3	3.8e-21	antB; anti-repressor protein	N/A
PHROG	UHGV-1544586_10	phrog_130	172.6	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1544586_10	UniRef90_C8WA47	437.0	0	Prophage antirepressor	N/A
eggNOG-mapper	UHGV-1544586_10	521095.Apar_0554	437.0	0	Antirepressor	N/A
Pfam	UHGV-1544586_10	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1544586_10	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1544586_10	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1544586_10	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1544586_13	PF02559,TIGR03318,COG1329	N/A	N/A	N/A	N/A
PHROG	UHGV-1544586_14	phrog_21525	71.0	1.7e-20	N/A	unknown function
Pfam	UHGV-1544586_14	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
PHROG	UHGV-1544586_15	phrog_954	190.1	0	DNA methyltransferase	other
UniRef90	UHGV-1544586_15	UniRef90_C8WA53	350.0	0	Putative methyltransferase	N/A
eggNOG-mapper	UHGV-1544586_15	521095.Apar_0561	350.0	0	Methyltransferase domain	N/A
PADLOC	UHGV-1544586_15	MTase_II_00074	178.3	0	Type II methyltransferase	RM
Pfam	UHGV-1544586_15	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1544586_15	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
PHROG	UHGV-1544586_16	phrog_419	107.9	1e-31	N/A	unknown function
UniRef90	UHGV-1544586_16	UniRef90_G4CG52	88.2	5.91e-21	Prophage Lp2 protein 33	N/A
eggNOG-mapper	UHGV-1544586_16	553184.ATORI0001_1196	184.0	0	N/A	N/A
structural_annotation	UHGV-1544586_16	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-1544586_17	phrog_5781	62.7	5.4e-18	N/A	unknown function
UniRef90	UHGV-1544586_17	UniRef90_UPI000931BFE8	73.2	0.0000000000000467	N/A	N/A
eggNOG-mapper	UHGV-1544586_17	521095.Apar_0563	209.0	0	N/A	N/A
Pfam	UHGV-1544586_17	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-1544586_17	PF14359	N/A	N/A	N/A	N/A
KOfam	UHGV-1544586_18	K14194	43.3	0.00000000000021	sdrC_D_E; serine-aspartate repeat-containing protein C/D/E	N/A
UniRef90	UHGV-1544586_18	UniRef90_UPI001EF9F008	90.1	2.28e-16	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1544586_18	661087.HMPREF1008_00250	125.0	2.82e-28	cell wall anchor domain	N/A
Pfam	UHGV-1544586_18	PF17961	N/A	N/A	Bacterial Ig domain	Big_8
Pfam	UHGV-1544586_18	PF05737	N/A	N/A	Collagen binding domain	Collagen_bind
COG	UHGV-1544586_18	COG4932	N/A	N/A	Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold	N/A
structural_annotation	UHGV-1544586_18	PF11766,NF033845,COG1470	N/A	N/A	N/A	N/A
KOfam	UHGV-1544586_20	K14059	193.7	0	int; integrase	N/A
PHROG	UHGV-1544586_20	phrog_1	187.3	0	integrase	integration and excision
UniRef90	UHGV-1544586_20	UniRef90_C8WA59	761.0	0	Integrase family protein	N/A
eggNOG-mapper	UHGV-1544586_20	521095.Apar_0567	761.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1544586_20	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1544586_20	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1544586_20	PF00589,PF13102,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1544586_23	K03111	133.8	2e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1544586_23	phrog_44	136.4	1.90001e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1544586_23	UniRef90_C8WA62	268.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1544586_23	521095.Apar_0570	268.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1544586_23	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1544586_23	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1544586_23	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1544586_23	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1544586_23	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1544586_24	1125712.HMPREF1316_1526	83.6	4.28e-18	N/A	N/A
structural_annotation	UHGV-1544586_24	PF04545,MF_00674,TIGR03879	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1544586_26	1203602.HMPREF1527_01098	77.0	3.26e-18	N/A	N/A
PHROG	UHGV-1544586_27	phrog_338	71.2	1.8e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1544586_27	UniRef90_C8WA66	210.0	0	HNH nuclease	N/A
eggNOG-mapper	UHGV-1544586_27	521095.Apar_0574	210.0	0	HNH nucleases	N/A
COG	UHGV-1544586_27	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1544586_27	PF01844	N/A	N/A	N/A	N/A
PHROG	UHGV-1544586_29	phrog_9	114.5	9.7e-34	terminase large subunit	head and packaging
UniRef90	UHGV-1544586_29	UniRef90_UPI001305466D	338.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1544586_29	521095.Apar_0576	971.0	0	Terminase	N/A
Pfam	UHGV-1544586_29	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-1544586_29	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1544586_29	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1544586_30	phrog_104	283.8	0	portal protein	head and packaging
UniRef90	UHGV-1544586_30	UniRef90_A0A5C7F7E3	552.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1544586_30	521095.Apar_0577	865.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1544586_30	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1544586_30	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1544586_31	phrog_13257	132.7	5.6e-40	head maturation protease	head and packaging
UniRef90	UHGV-1544586_31	UniRef90_A0A3E4QYQ8	203.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1544586_31	521095.Apar_0578	747.0	0	N/A	N/A
PHROG	UHGV-1544586_32	phrog_233	70.4	4.7e-20	head scaffolding protein	head and packaging
UniRef90	UHGV-1544586_32	UniRef90_A0A412EZF6	77.8	0.00000000000000228	N/A	N/A
eggNOG-mapper	UHGV-1544586_32	521095.Apar_0579	249.0	0	N/A	N/A
PHROG	UHGV-1544586_33	phrog_10	138.4	6.09999e-41	major head protein	head and packaging
UniRef90	UHGV-1544586_33	UniRef90_C8WA72	523.0	0	Major capsid protein HK97	N/A
eggNOG-mapper	UHGV-1544586_33	521095.Apar_0580	523.0	0	Phage capsid family	N/A
Pfam	UHGV-1544586_33	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1544586_33	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1544586_33	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1544586_33	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1544586_34	phrog_137	62.0	7.7e-18	head-tail adaptor Ad1	connector
UniRef90	UHGV-1544586_34	UniRef90_UPI00164FAC50	121.0	7.15e-33	Gp19/Gp15/Gp42 family protein	N/A
eggNOG-mapper	UHGV-1544586_34	521095.Apar_0581	244.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1544586_34	PF09355	N/A	N/A	N/A	Phage_Gp19
PHROG	UHGV-1544586_35	phrog_501	59.2	8e-17	head closure Hc1	connector
UniRef90	UHGV-1544586_35	UniRef90_A0A5C7ERG1	71.2	0.0000000000000993	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-1544586_35	521095.Apar_0582	180.0	0	N/A	N/A
structural_annotation	UHGV-1544586_35	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1544586_37	phrog_123	44.5	0.0000000000026	tail terminator	connector
UniRef90	UHGV-1544586_37	UniRef90_F3MWA9	54.3	0.000000429	N/A	N/A
eggNOG-mapper	UHGV-1544586_37	521095.Apar_0584	213.0	0	N/A	N/A
structural_annotation	UHGV-1544586_37	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1544586_38	phrog_117	91.3	1.1e-26	major tail protein	tail
UniRef90	UHGV-1544586_38	UniRef90_D6E9Y1	167.0	0	Bacterial surface proteins containing Ig-like domains	N/A
eggNOG-mapper	UHGV-1544586_38	521095.Apar_0585	378.0	0	domain, Protein	N/A
COG	UHGV-1544586_38	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1544586_38	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1544586_41	phrog_1686	236.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1544586_41	UniRef90_C8WA80	1177.0	0	Phage tape measure protein	N/A
eggNOG-mapper	UHGV-1544586_41	521095.Apar_0588	1177.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-1544586_41	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1544586_41	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1544586_41	COG0840	N/A	N/A	Methyl-accepting chemotaxis protein (MCP)	N/A
structural_annotation	UHGV-1544586_41	PF20155,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-1544586_42	UniRef90_A0A087E4D3	159.0	9.24857e-44	Phage tail protein	N/A
eggNOG-mapper	UHGV-1544586_42	521095.Apar_0589	475.0	0	N/A	N/A
structural_annotation	UHGV-1544586_42	PF16774,TIGR02126,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1544586_43	phrog_538	162.4	0	minor tail protein	tail
UniRef90	UHGV-1544586_43	UniRef90_A0A261FFB2	264.0	0	Siphovirus ReqiPepy6 Gp37-like protein	N/A
eggNOG-mapper	UHGV-1544586_43	521095.Apar_0590	874.0	0	N/A	N/A
Pfam	UHGV-1544586_43	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1544586_43	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1544586_45	phrog_13141	155.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1544586_45	521095.Apar_0592	294.0	0	N/A	N/A
structural_annotation	UHGV-1544586_45	PF08931,PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-1544586_47	phrog_297	56.9	3.8e-16	holin	lysis
UniRef90	UHGV-1544586_47	UniRef90_C8WA86	176.0	0	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1544586_47	521095.Apar_0594	176.0	0	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1544586_47	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1544586_47	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1544586_47	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1544586_47	PF04531,TIGR01598,COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-1544586_48	K07273	128.9	4.7e-38	acm; lysozyme	N/A
PHROG	UHGV-1544586_48	phrog_291	126.9	2.1e-37	endolysin	lysis
UniRef90	UHGV-1544586_48	UniRef90_A0A0R1K219	199.0	0	Glycoside hydrolase family 25	N/A
eggNOG-mapper	UHGV-1544586_48	553184.ATORI0001_0988	434.0	0	lysozyme activity	N/A
Pfam	UHGV-1544586_48	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1544586_48	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
Pfam	UHGV-1544586_48	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1544586_48	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1544586_48	PF01183,PF19127,TIGR04035,COG5263,COG3757	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1544586	Yes	31,963	45	100	1
UHGV-1528764	No	19,670	45	62	1