Viral OTU vOTU-073894

vOTU: vOTU-073894

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-073894
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-00393 → vSUBGEN-40783 → vOTU-073894
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1389798
Biosample ID	N/A
Length	40,557 bps
CheckV Completeness	96.21% (High-quality)
CDS Count	55
CDS Density	95.21%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 96.21)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1389798_2	UniRef90_A7VNR4	55.5	0.000000892	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1389798_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1389798_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1389798_2	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1389798_3	K14059	132.3	6.7e-39	int; integrase	N/A
PHROG	UHGV-1389798_3	phrog_1	142.5	3.30006e-42	integrase	integration and excision
UniRef90	UHGV-1389798_3	UniRef90_A0A2Z4QB94	313.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1389798_3	641112.ACOK01000111_gene1860	114.0	4.34e-26	Phage integrase family	N/A
Pfam	UHGV-1389798_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1389798_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1389798_3	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1389798_4	UniRef90_A0A7M1RTM1	68.2	0.0000000000387	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1389798_4	1378168.N510_03079	68.9	0.000000000008	N/A	N/A
PHROG	UHGV-1389798_7	phrog_5783	298.8	0	N/A	unknown function
UniRef90	UHGV-1389798_7	UniRef90_A0A7X2P6J8	291.0	0	NYN domain-containing protein	N/A
eggNOG-mapper	UHGV-1389798_7	742742.HMPREF9452_00448	277.0	0	NYN domain	N/A
Pfam	UHGV-1389798_7	PF01936	N/A	N/A	NYN domain	NYN
COG	UHGV-1389798_7	COG1432	N/A	N/A	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	N/A
structural_annotation	UHGV-1389798_7	PF01936,TIGR00288,COG1432	N/A	N/A	N/A	N/A
UniRef90	UHGV-1389798_8	UniRef90_A0A843IZ65	63.5	0.0000000000106	Sigma70_r4 domain-containing protein	N/A
Pfam	UHGV-1389798_8	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-1389798_8	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1389798_8	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1389798_9	K01447	105.5	6.5e-31	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1389798_9	phrog_1794	109.6	3.6e-32	amidase	lysis
UniRef90	UHGV-1389798_9	UniRef90_A0A3D4VSU2	166.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1389798_9	411470.RUMGNA_02087	150.0	6.32e-40	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1389798_9	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1389798_9	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1389798_9	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1389798_10	phrog_6918	93.0	2e-27	holin	lysis
UniRef90	UHGV-1389798_10	UniRef90_A0A316QCY7	96.7	7.38e-24	Holin	N/A
eggNOG-mapper	UHGV-1389798_10	1297617.JPJD01000020_gene301	95.1	5.15e-24	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1389798_10	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1389798_10	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-1389798_12	phrog_937	51.5	0.000000000000017	hemolysin	other
eggNOG-mapper	UHGV-1389798_12	1519439.JPJG01000023_gene533	74.7	9.57e-16	N/A	N/A
KOfam	UHGV-1389798_13	K20846	66.3	2.7e-19	cgkA; kappa-carrageenase [EC:3.2.1.83]	N/A
PHROG	UHGV-1389798_13	phrog_215	96.7	1.4e-28	structural protein with Ig domain	head and packaging
UniRef90	UHGV-1389798_13	UniRef90_A0A1I1Z9R5	110.0	4e-22	Calcineurin-like phosphoesterase	N/A
eggNOG-mapper	UHGV-1389798_13	485916.Dtox_1961	85.1	0.0000000000000437	PFAM Bacterial Ig-like domain (group 2)	N/A
Pfam	UHGV-1389798_13	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-1389798_13	COG3210	N/A	N/A	Large exoprotein involved in heme utilization or adhesion	N/A
structural_annotation	UHGV-1389798_13	PF02368,PF09423,MF_00575,NF003743,NF005261,COG5492	N/A	N/A	N/A	N/A
COG	UHGV-1389798_14	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
COG	UHGV-1389798_15	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
KOfam	UHGV-1389798_16	K16628	41.1	0.0000000000047	COL7A; collagen type VII alpha	N/A
Pfam	UHGV-1389798_16	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1389798_16	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1389798_17	PF18962,NF011773	N/A	N/A	N/A	N/A
PHROG	UHGV-1389798_18	phrog_13543	82.9	1.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-1389798_18	1408437.JNJN01000039_gene389	513.0	0	heme binding	N/A
COG	UHGV-1389798_18	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
UniRef90	UHGV-1389798_19	UniRef90_R5DCX9	188.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1389798_19	1410650.JHWL01000003_gene2815	129.0	1.36e-30	N/A	N/A
eggNOG-mapper	UHGV-1389798_21	537007.BLAHAN_05255	65.5	0.0000000162	N/A	N/A
PHROG	UHGV-1389798_22	phrog_12105	114.2	6.8e-34	N/A	unknown function
eggNOG-mapper	UHGV-1389798_22	1226322.HMPREF1545_03850	56.2	0.0000000477	N/A	N/A
PHROG	UHGV-1389798_23	phrog_15239	48.9	0.000000000000094	N/A	unknown function
PHROG	UHGV-1389798_24	phrog_1357	239.1	0	major head protein	head and packaging
UniRef90	UHGV-1389798_24	UniRef90_A0A2V2CFL5	393.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1389798_24	1410650.JHWL01000003_gene2830	295.0	0	N/A	N/A
Pfam	UHGV-1389798_24	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1389798_24	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1389798_24	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1389798_25	phrog_13908	189.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1389798_25	1410650.JHWL01000003_gene2831	127.0	8.82e-32	N/A	N/A
PHROG	UHGV-1389798_26	phrog_156	304.8	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1389798_26	1410650.JHWL01000003_gene2833	530.0	0	N/A	N/A
structural_annotation	UHGV-1389798_26	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1389798_27	phrog_511	213.2	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1389798_27	1410650.JHWL01000003_gene2827	327.0	0	N/A	N/A
structural_annotation	UHGV-1389798_27	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
KOfam	UHGV-1389798_28	K06909	133.7	1.7e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1389798_28	phrog_2	123.8	2.2e-36	terminase large subunit	head and packaging
UniRef90	UHGV-1389798_28	UniRef90_A0A810Q5R0	610.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1389798_28	1410650.JHWL01000003_gene2834	574.0	0	N/A	N/A
Pfam	UHGV-1389798_28	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1389798_28	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1389798_28	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
Pfam	UHGV-1389798_29	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1389798_29	PF16677	N/A	N/A	N/A	N/A
UniRef90	UHGV-1389798_30	UniRef90_A0A8G1TBS8	51.2	0.000000693	Conjugal transfer protein	N/A
eggNOG-mapper	UHGV-1389798_30	1235790.C805_01029	53.5	0.0000000143	Cysteine-rich KTR	N/A
Pfam	UHGV-1389798_30	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
PHROG	UHGV-1389798_31	phrog_3584	119.0	3.2e-35	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1389798_31	537013.CLOSTMETH_02141	85.1	1.41e-17	N/A	N/A
structural_annotation	UHGV-1389798_31	PF21578,MF_00360	N/A	N/A	N/A	N/A
KOfam	UHGV-1389798_32	K00571	102.3	5.5e-30	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1389798_32	phrog_23224	179.5	0	DNA methyltransferase	other
UniRef90	UHGV-1389798_32	UniRef90_UPI0012DD751B	364.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1389798_32	718252.FP2_06750	355.0	0	DNA methylase	N/A
PADLOC	UHGV-1389798_32	MTase_II_00172	88.0	7e-27	Type II methyltransferase	RM
Pfam	UHGV-1389798_32	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1389798_32	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1389798_32	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1389798_34	phrog_190	102.4	4.1e-30	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1389798_34	UniRef90_UPI0006C2AC63	123.0	4.02e-33	N/A	N/A
eggNOG-mapper	UHGV-1389798_34	693746.OBV_25250	117.0	2.64e-31	N/A	N/A
Pfam	UHGV-1389798_34	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1389798_34	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1389798_39	phrog_31029	57.1	2.3e-16	N/A	unknown function
PHROG	UHGV-1389798_40	phrog_38832	54.1	4.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-1389798_40	1232443.BAIA02000078_gene48	67.4	0.000000000000605	N/A	N/A
structural_annotation	UHGV-1389798_40	PF18358	N/A	N/A	N/A	N/A
KOfam	UHGV-1389798_41	K00558	150.1	1.4013e-45	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1389798_41	phrog_363	240.5	0	DNA methyltransferase	other
UniRef90	UHGV-1389798_41	UniRef90_G4KRB8	342.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1389798_41	693746.OBV_01900	342.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1389798_41	MTase_II_00058	115.0	5.5e-34	Type II methyltransferase	RM
Pfam	UHGV-1389798_41	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1389798_41	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1389798_41	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1389798_41	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1389798_44	PF05082	N/A	N/A	N/A	N/A
COG	UHGV-1389798_45	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
UniRef90	UHGV-1389798_46	UniRef90_A0A098GES5	101.0	4.65e-26	Putative phage associated protein	N/A
structural_annotation	UHGV-1389798_46	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1389798_49	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1389798_54	K22300	50.8	0.000000000000034	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1389798_54	phrog_8	43.5	0.0000000000067	transcriptional regulator	transcription regulation
UniRef90	UHGV-1389798_54	UniRef90_A0A1Y4L0A2	110.0	6.27e-29	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1389798_54	411471.SUBVAR_05818	97.4	1.83e-24	sequence-specific DNA binding	N/A
Pfam	UHGV-1389798_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1389798_54	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1389798_54	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1389798	Yes	40,557	58	96	1
UHGV-1329086	No	40,557	58	96	1
UHGV-0107121	No	12,646	61	30	1