Viral OTU vOTU-074048

vOTU: vOTU-074048

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-074048
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00074 → vSUBFAM-03280 → vGENUS-14263 → vSUBGEN-23785 → vOTU-074048
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UBA1740 → UBA1740 sp900767415
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0003526
Biosample ID	SAMEA4765669
Length	38,244 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	65
CDS Density	91.70%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0003526_1	phrog_11420	67.6	1.4e-19	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003526_1	UniRef90_A0A412AWF5	68.9	0.000000000000139	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0003526_1	537007.BLAHAN_04201	62.8	0.00000000000962	Helix-turn-helix domain	N/A
Pfam	UHGV-0003526_1	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
structural_annotation	UHGV-0003526_1	PF04218	N/A	N/A	N/A	N/A
PHROG	UHGV-0003526_3	phrog_15768	86.6	4.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-0003526_3	1095750.HMPREF9970_1674	134.0	4.5e-34	N/A	N/A
structural_annotation	UHGV-0003526_3	PF10771,NF006999,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-0003526_7	phrog_253	98.7	5.8e-29	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003526_7	UniRef90_A0A1C5N4H2	91.7	2.31e-20	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-0003526_7	1226322.HMPREF1545_04074	64.3	0.000000000127	Siphovirus Gp157	N/A
Pfam	UHGV-0003526_7	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0003526_7	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0003526_8	phrog_14970	191.2	0	N/A	unknown function
UniRef90	UHGV-0003526_8	UniRef90_UPI00123F00F5	184.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0003526_8	1122981.AUME01000026_gene555	146.0	9.62972e-42	double-strand break repair protein	N/A
Pfam	UHGV-0003526_8	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0003526_8	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0003526_8	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0003526_9	phrog_72	60.3	2.7e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003526_9	UniRef90_UPI000C7BF263	134.0	7.29e-37	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0003526_9	445972.ANACOL_01825	117.0	4.64e-31	N/A	N/A
Pfam	UHGV-0003526_9	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0003526_9	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0003526_10	phrog_7566	86.4	2e-25	N/A	unknown function
UniRef90	UHGV-0003526_10	UniRef90_A0A373MWE5	52.4	0.00000084	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0003526_10	1304866.K413DRAFT_1198	63.9	0.00000000000388	N/A	N/A
Pfam	UHGV-0003526_10	PF01844	N/A	N/A	HNH endonuclease	HNH
KOfam	UHGV-0003526_11	K03111	131.3	1.1e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0003526_11	phrog_44	122.8	2.8e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003526_11	UniRef90_A0A2V2FDW3	164.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0003526_11	1235835.C814_01372	114.0	9.97e-31	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0003526_11	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0003526_11	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0003526_11	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0003526_11	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0003526_11	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0003526_13	phrog_4973	64.1	2e-18	N/A	unknown function
UniRef90	UHGV-0003526_13	UniRef90_A0A3D3Y0P8	68.6	0.00000000000011	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0003526_13	339671.Asuc_1218	48.9	0.00000133	Helix-turn-helix domain	N/A
Pfam	UHGV-0003526_13	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0003526_13	PF14090,MF_01586,TIGR00373,COG5625	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0003526_14	PF18618	N/A	N/A	N/A	N/A
PHROG	UHGV-0003526_16	phrog_599	48.8	0.00000000000014	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0003526_16	UniRef90_A0A3D9XTF5	49.3	0.00000241	Lar family restriction alleviation protein	N/A
Pfam	UHGV-0003526_16	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-0003526_16	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0003526_16	NF007260	N/A	N/A	N/A	N/A
UniRef90	UHGV-0003526_17	UniRef90_A0A8D9PDT5	52.0	0.00000256	Hydrogenase/urease nickel incorporation protein	N/A
PHROG	UHGV-0003526_19	phrog_3136	129.5	1.2e-38	N/A	unknown function
UniRef90	UHGV-0003526_19	UniRef90_UPI001CBCD733	133.0	3.81e-36	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0003526_19	97139.C824_00742	63.9	0.00000000018	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-0003526_19	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0003526_19	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0003526_19	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
COG	UHGV-0003526_22	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
KOfam	UHGV-0003526_27	K21138	79.0	9e-23	HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2]	N/A
PHROG	UHGV-0003526_27	phrog_990	122.7	2.3e-36	metal-dependent phosphohydrolase	other
UniRef90	UHGV-0003526_27	UniRef90_A0A4R1S620	148.0	3.58732e-43	HD domain-containing protein	N/A
eggNOG-mapper	UHGV-0003526_27	663952.SDD27957_09155	141.0	2.23003e-41	Guanosine polyphosphate pyrophosphohydrolases synthetases	N/A
Pfam	UHGV-0003526_27	PF13328	N/A	N/A	HD domain	HD_4
COG	UHGV-0003526_27	COG0317	N/A	N/A	(p)ppGpp synthase/hydrolase, HD superfamily	N/A
structural_annotation	UHGV-0003526_27	PF13328	N/A	N/A	N/A	N/A
Pfam	UHGV-0003526_33	PF14206	N/A	N/A	Cysteine-rich CPCC	Cys_rich_CPCC
UniRef90	UHGV-0003526_34	UniRef90_A0A1Q6KPN9	65.5	0.00000000013	HTH psq-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0003526_34	1235790.C805_00037	63.5	0.0000000000829	N/A	N/A
KOfam	UHGV-0003526_35	K06909	103.8	1.8e-30	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0003526_35	phrog_2	119.0	5.9e-35	terminase large subunit	head and packaging
UniRef90	UHGV-0003526_35	UniRef90_A0A3C1A8K4	249.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0003526_35	411460.RUMTOR_02085	184.0	0	N/A	N/A
Pfam	UHGV-0003526_35	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0003526_35	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0003526_35	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0003526_36	phrog_533	88.4	2.4e-26	portal protein	head and packaging
Pfam	UHGV-0003526_36	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0003526_36	PF05133,MF_04120,TIGR01542,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0003526_37	phrog_581	110.0	3e-32	minor head protein	head and packaging
UniRef90	UHGV-0003526_37	UniRef90_A0A2Z4GUI4	148.0	4.01e-38	Minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0003526_37	285514.JNWO01000004_gene6426	62.0	0.000000104	Phage minor capsid protein 2	N/A
Pfam	UHGV-0003526_37	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-0003526_37	PF06152,TIGR01641	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0003526_39	553973.CLOHYLEM_05487	57.0	0.00000671	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
Pfam	UHGV-0003526_39	PF13287	N/A	N/A	Fn3 associated	Fn3_assoc
COG	UHGV-0003526_39	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0003526_39	PF05065,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0003526_40	phrog_16619	60.6	8.7e-18	minor head protein	head and packaging
structural_annotation	UHGV-0003526_46	PF07405,TIGR01563	N/A	N/A	N/A	N/A
UniRef90	UHGV-0003526_47	UniRef90_A0A2Z4GU91	72.0	0.0000000000000683	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0003526_50	643473.KB235930_gene4010	52.4	0.000000624	N/A	N/A
eggNOG-mapper	UHGV-0003526_51	1118057.CAGX01000020_gene1617	56.2	0.000000000482	N/A	N/A
Pfam	UHGV-0003526_52	PF14206	N/A	N/A	Cysteine-rich CPCC	Cys_rich_CPCC
structural_annotation	UHGV-0003526_54	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0003526_55	phrog_13980	43.0	0.0000000000045	tail fiber protein	tail
KOfam	UHGV-0003526_60	K18843	58.4	1.7e-16	hicB; antitoxin HicB	N/A
PHROG	UHGV-0003526_60	phrog_497	75.0	1.3e-21	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0003526_60	UniRef90_R6GVF3	154.0	1.4013e-45	HicB-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0003526_60	592026.GCWU0000282_000314	149.0	2.24208e-44	N/A	N/A
Pfam	UHGV-0003526_60	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0003526_60	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0003526_60	PF15919,COG1598	N/A	N/A	N/A	N/A
KOfam	UHGV-0003526_61	K07339	59.8	4.1e-17	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-0003526_61	phrog_353	56.1	4.8e-16	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0003526_61	UniRef90_A0A6I3Q9T7	97.8	9.12e-26	Addiction module toxin, HicA family	N/A
eggNOG-mapper	UHGV-0003526_61	592031.GCWU000322_00749	76.6	3.8e-18	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-0003526_61	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
structural_annotation	UHGV-0003526_61	PF07927,COG1724	N/A	N/A	N/A	N/A
UniRef90	UHGV-0003526_64	UniRef90_R6TP76	79.3	2.65e-18	RHH_1 domain-containing protein	N/A
structural_annotation	UHGV-0003526_64	PF01402,NF040976,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-0003526_65	K07482	296.6	0	K07482; transposase, IS30 family	N/A
PHROG	UHGV-0003526_65	phrog_4646	373.1	0	transposase	integration and excision
UniRef90	UHGV-0003526_65	UniRef90_UPI00164A43CF	377.0	0	IS30 family transposase	N/A
eggNOG-mapper	UHGV-0003526_65	397290.C810_00443	336.0	0	N/A	N/A
Pfam	UHGV-0003526_65	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
NCBIFam	UHGV-0003526_65	NF033563.0	N/A	N/A	IS30 family transposase	N/A
COG	UHGV-0003526_65	COG2826	N/A	N/A	Transposase and inactivated derivatives, IS30 family	N/A
structural_annotation	UHGV-0003526_65	PF13358,PF13384,NF033563,COG2826	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0003526	Yes	38,244	52	100	1