Viral OTU vOTU-076000

vOTU: vOTU-076000

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-076000
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00012 → vSUBFAM-00036 → vGENUS-00011 → vSUBGEN-00014 → vOTU-076000
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Gemmiger → Gemmiger formicilis
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-1942268
Biosample ID	N/A
Length	13,766 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	16
CDS Density	90.55%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1942268_1	1353528.DT23_11810	58.9	0.00000486	Pectate lyase superfamily protein	N/A
Pfam	UHGV-1942268_1	PF12708	N/A	N/A	Pectate lyase superfamily protein	Pectate_lyase_3
COG	UHGV-1942268_1	COG5434	N/A	N/A	Polygalacturonase	N/A
structural_annotation	UHGV-1942268_1	PF13229,TIGR04247,COG3420	N/A	N/A	N/A	N/A
PHROG	UHGV-1942268_3	phrog_2038	93.5	1.5e-27	upper collar connector	connector
UniRef90	UHGV-1942268_3	UniRef90_A0A2Z4GUB7	242.0	0	Upper collar protein	N/A
eggNOG-mapper	UHGV-1942268_3	10756.PORTL_BPPH2	67.8	0.000000000496	Phage Connector (GP10)	N/A
Pfam	UHGV-1942268_3	PF05352	N/A	N/A	Phage Connector (GP10)	Phage_connector
structural_annotation	UHGV-1942268_3	PF05352,TIGR01538,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1942268_4	K19304	68.4	1.2e-19	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-1942268_4	phrog_7767	68.7	7.6e-20	metallo-endopeptidase	other
UniRef90	UHGV-1942268_4	UniRef90_A0A4Q0U6L7	121.0	6.46e-32	Peptidase_M23 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-1942268_4	1308866.J416_13299	62.0	0.00000000929	G5	N/A
Pfam	UHGV-1942268_4	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-1942268_4	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-1942268_4	PF01551,NF040883,COG0739	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1942268_5	PF20934	N/A	N/A	N/A	N/A
PHROG	UHGV-1942268_6	phrog_2006	42.1	0.0000000000031	major head protein	head and packaging
UniRef90	UHGV-1942268_6	UniRef90_A0A843GUF8	125.0	5.77e-29	Ig-like domain repeat protein	N/A
structural_annotation	UHGV-1942268_6	PF21703,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1942268_10	phrog_2150	85.3	3.5e-25	terminase	head and packaging
UniRef90	UHGV-1942268_10	UniRef90_A0A843GFY2	192.0	0	Phage DNA encapsidation protein	N/A
Pfam	UHGV-1942268_10	PF05894	N/A	N/A	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
structural_annotation	UHGV-1942268_10	PF05894,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1942268_11	K21237	56.6	1.7e-16	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	N/A
PHROG	UHGV-1942268_11	phrog_1907	151.1	5.60519e-45	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1942268_11	UniRef90_A0A4Q0U6P8	682.0	0	DNA-directed DNA polymerase (Fragment)	N/A
Pfam	UHGV-1942268_11	PF03175	N/A	N/A	DNA polymerase type B, organellar and viral	DNA_pol_B_2
structural_annotation	UHGV-1942268_11	PF03175,MF_04055,NF004417,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-1942268_14	phrog_6243	65.8	5.8e-19	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
Pfam	UHGV-1942268_14	PF17427	N/A	N/A	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
structural_annotation	UHGV-1942268_14	PF17427	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1942268	Yes	13,766	50	100	1
UHGV-2233361	No	7,344	51	55	1