Viral OTU vOTU-076112

vOTU: vOTU-076112

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-076112
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 → vSUBFAM-03891 → vGENUS-13618 → vSUBGEN-22050 → vOTU-076112
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → HGM13006 → HGM13006 sp900756575
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-2039113
Biosample ID	N/A
Length	33,200 bps
CheckV Completeness	93.57% (High-quality)
CDS Count	49
CDS Density	92.89%
tRNA Count	2
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.57)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2039113_1	K07273	194.3	0	acm; lysozyme	N/A
PHROG	UHGV-2039113_1	phrog_291	150.8	9.80909e-45	endolysin	lysis
UniRef90	UHGV-2039113_1	UniRef90_A0A1I3PDY7	181.0	0	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
eggNOG-mapper	UHGV-2039113_1	1120746.CCNL01000017_gene2575	153.0	2.42999e-41	lysozyme activity	N/A
Pfam	UHGV-2039113_1	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-2039113_1	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-2039113_1	PF01183,PF19127,TIGR04035,TIGR04303,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_2	phrog_199	62.7	4.5e-18	holin	lysis
UniRef90	UHGV-2039113_2	UniRef90_A0A6G3M4V0	155.0	1.4013e-45	Holin	N/A
eggNOG-mapper	UHGV-2039113_2	693746.OBV_01620	142.0	5.76999e-41	Bacteriophage holin family	N/A
Pfam	UHGV-2039113_2	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-2039113_2	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-2039113_2	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-2039113_2	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
Pfam	UHGV-2039113_3	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-2039113_4	PF05382,COG3738	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_5	phrog_18110	154.2	0	N/A	unknown function
UniRef90	UHGV-2039113_5	UniRef90_A0A3A6ECU0	188.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-2039113_5	1280689.AUJC01000007_gene3306	119.0	1.11e-25	Phage minor structural protein	N/A
Pfam	UHGV-2039113_5	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-2039113_5	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-2039113_5	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-2039113_6	PF20753,PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_7	phrog_28775	220.3	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-2039113_7	1122146.AUHP01000010_gene1066	234.0	0	Phage tail tape measure protein	N/A
Pfam	UHGV-2039113_7	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-2039113_7	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-2039113_7	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-2039113_7	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_8	phrog_706	94.9	8.6e-28	N/A	unknown function
eggNOG-mapper	UHGV-2039113_8	742723.HMPREF9477_00898	62.8	0.000000000827	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2039113_8	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2039113_8	PF06854	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2039113_9	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_10	phrog_820	44.8	0.0000000000018	major tail protein	tail
eggNOG-mapper	UHGV-2039113_10	663278.Ethha_0099	102.0	1.95e-25	N/A	N/A
structural_annotation	UHGV-2039113_10	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_11	phrog_3266	100.5	1.2e-29	tail completion	connector
UniRef90	UHGV-2039113_11	UniRef90_UPI001F2730AA	96.7	5.83e-23	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-2039113_11	545697.HMPREF0216_02854	97.8	3.54e-24	N/A	N/A
structural_annotation	UHGV-2039113_11	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_12	phrog_556	72.5	5.5e-21	minor head protein	head and packaging
UniRef90	UHGV-2039113_12	UniRef90_A0A7G9WJF3	70.9	0.000000000000157	Capsid protein	N/A
eggNOG-mapper	UHGV-2039113_12	1423767.BALU01000006_gene770	50.4	0.00000254	Minor capsid protein	N/A
Pfam	UHGV-2039113_12	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2039113_12	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_13	phrog_3366	49.8	0.000000000000063	N/A	unknown function
structural_annotation	UHGV-2039113_13	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_15	phrog_422	202.6	0	major head protein	head and packaging
eggNOG-mapper	UHGV-2039113_15	693746.OBV_18090	369.0	0	N/A	N/A
structural_annotation	UHGV-2039113_15	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_16	phrog_194	82.0	9.5e-24	head scaffolding protein	head and packaging
UniRef90	UHGV-2039113_16	UniRef90_UPI000B35FF41	196.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-2039113_16	663278.Ethha_0497	132.0	1.09e-36	N/A	N/A
Pfam	UHGV-2039113_16	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2039113_16	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_18	phrog_581	309.4	0	minor head protein	head and packaging
UniRef90	UHGV-2039113_18	UniRef90_A0A8J6IQK9	365.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-2039113_18	936375.HMPREF1152_1071	340.0	0	N/A	N/A
Pfam	UHGV-2039113_18	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2039113_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2039113_18	PF06152,PF12106	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_19	phrog_533	301.7	0	portal protein	head and packaging
UniRef90	UHGV-2039113_19	UniRef90_A0A173Y8E3	370.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-2039113_19	641112.ACOK01000073_gene2889	210.0	0	N/A	N/A
Pfam	UHGV-2039113_19	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2039113_19	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2039113_20	K06909	384.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2039113_20	phrog_3717	137.3	8.69996e-41	terminase large subunit	head and packaging
UniRef90	UHGV-2039113_20	UniRef90_R5AG08	614.0	0	Phage terminase	N/A
eggNOG-mapper	UHGV-2039113_20	665956.HMPREF1032_02957	510.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2039113_20	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2039113_20	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2039113_20	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2039113_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2039113_20	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_21	phrog_309	187.1	0	terminase small subunit	head and packaging
UniRef90	UHGV-2039113_21	UniRef90_UPI001D01EB7C	197.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2039113_21	1408437.JNJN01000045_gene597	177.0	0	HNH endonuclease	N/A
COG	UHGV-2039113_21	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-2039113_21	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_22	phrog_36	57.8	2.1e-16	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-2039113_22	1200567.JNKD01000011_gene654	50.4	0.00000616	sigma factor activity	N/A
COG	UHGV-2039113_22	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-2039113_22	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_23	phrog_6568	62.6	4.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-2039113_23	1203606.HMPREF1526_00241	48.5	0.000000898	N/A	N/A
KOfam	UHGV-2039113_24	K00571	89.9	2.6e-26	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-2039113_24	phrog_23224	99.7	5.8e-32	DNA methyltransferase	other
UniRef90	UHGV-2039113_24	UniRef90_A0A6N9P648	251.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-2039113_24	1268240.ATFI01000007_gene431	192.0	0	DNA methylase	N/A
PADLOC	UHGV-2039113_24	MTase_II_00172	104.5	1.5e-30	Type II methyltransferase	RM
Pfam	UHGV-2039113_24	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-2039113_24	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-2039113_24	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2039113_25	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_27	phrog_16304	68.2	1.2e-19	N/A	unknown function
UniRef90	UHGV-2039113_27	UniRef90_UPI001E36D421	102.0	2.32e-23	N/A	N/A
eggNOG-mapper	UHGV-2039113_27	1139219.I569_00067	108.0	1.48e-25	DnaD domain protein	N/A
Pfam	UHGV-2039113_27	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-2039113_27	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-2039113_27	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-2039113_28	K03111	132.5	4.8e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2039113_28	phrog_44	134.8	5.70001e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2039113_28	UniRef90_A0A2V2CEG7	161.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2039113_28	693746.OBV_19910	155.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-2039113_28	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2039113_28	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2039113_28	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2039113_28	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2039113_28	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_29	phrog_7370	49.7	0.000000000000053	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2039113_29	UniRef90_A0A3D3Y4P7	131.0	8.46e-38	HNH domain-containing protein	N/A
Pfam	UHGV-2039113_29	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-2039113_30	phrog_72	57.9	9e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2039113_30	UniRef90_UPI000C7BF263	122.0	5.41e-32	recombination protein NinB	N/A
eggNOG-mapper	UHGV-2039113_30	445972.ANACOL_01825	131.0	1.95e-36	N/A	N/A
structural_annotation	UHGV-2039113_30	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_31	phrog_155	149.0	2.66247e-44	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2039113_31	UniRef90_UPI001439856C	183.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-2039113_31	97138.C820_00777	178.0	0	ERF superfamily	N/A
Pfam	UHGV-2039113_31	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-2039113_31	PF04404,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2039113_33	PF00412	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_34	phrog_1029	170.3	0	N/A	unknown function
eggNOG-mapper	UHGV-2039113_34	1203606.HMPREF1526_01890	142.0	5.54e-39	N/A	N/A
structural_annotation	UHGV-2039113_34	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_35	phrog_997	112.3	3.3e-33	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2039113_35	UniRef90_R6MCS9	100.0	4.11e-25	N/A	N/A
eggNOG-mapper	UHGV-2039113_35	552398.HMPREF0866_01626	129.0	3.31e-37	N/A	N/A
UniRef90	UHGV-2039113_38	UniRef90_UPI001D12C7BA	48.1	0.00000699	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-2039113_38	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-2039113_38	PF13443,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_39	phrog_1305	116.0	2.6e-34	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2039113_39	UniRef90_UPI001D033BDD	247.0	0	N/A	N/A
eggNOG-mapper	UHGV-2039113_39	626523.GCWU000342_01044	166.0	0	N/A	N/A
Pfam	UHGV-2039113_39	PF13643	N/A	N/A	N/A	DUF4145
structural_annotation	UHGV-2039113_39	COG2250	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_40	phrog_14088	62.1	4.7e-18	N/A	unknown function
UniRef90	UHGV-2039113_40	UniRef90_A0A3R6M7R7	67.4	0.000000000000149	Carboxypeptidase	N/A
eggNOG-mapper	UHGV-2039113_40	626523.GCWU000342_01045	64.7	0.000000000000298	N/A	N/A
KOfam	UHGV-2039113_41	K22300	47.4	0.0000000000004	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2039113_41	phrog_3	50.5	0.000000000000088	transcriptional repressor	transcription regulation
UniRef90	UHGV-2039113_41	UniRef90_A0A329TTX5	82.0	3.5e-19	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2039113_41	1504823.CCMM01000008_gene1079	61.6	0.00000000000827	sequence-specific DNA binding	N/A
Pfam	UHGV-2039113_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2039113_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2039113_41	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_42	phrog_2967	60.2	3.3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-2039113_42	UniRef90_UPI00156DFA47	85.9	4.31e-19	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-2039113_42	1121344.JHZO01000003_gene989	80.1	9.91e-18	PFAM helix-turn-helix domain protein	N/A
Pfam	UHGV-2039113_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2039113_42	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-2039113_42	PF12844,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_43	phrog_87	85.0	6.2e-25	metallo-protease	other
UniRef90	UHGV-2039113_43	UniRef90_A0A1Y4S739	160.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-2039113_43	1226322.HMPREF1545_00086	136.0	2.74e-39	N/A	N/A
Pfam	UHGV-2039113_43	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-2039113_43	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_44	phrog_4852	46.6	1.3e-20	N/A	unknown function
UniRef90	UHGV-2039113_44	UniRef90_UPI001C3BF288	128.0	1.17e-31	Zinc-ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-2039113_44	553973.CLOHYLEM_06271	121.0	6.29e-30	response to antibiotic	N/A
Pfam	UHGV-2039113_44	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
COG	UHGV-2039113_44	COG4640	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2039113_44	PF12729	N/A	N/A	N/A	N/A
PHROG	UHGV-2039113_45	phrog_36767	60.1	2.7e-17	N/A	unknown function
UniRef90	UHGV-2039113_45	UniRef90_A0A8J6J1Y7	75.5	3.43e-16	N/A	N/A
Pfam	UHGV-2039113_45	PF10049	N/A	N/A	N/A	DUF2283
structural_annotation	UHGV-2039113_46	PF18812,COG2929	N/A	N/A	N/A	N/A
KOfam	UHGV-2039113_48	K14059	212.4	0	int; integrase	N/A
PHROG	UHGV-2039113_48	phrog_1	219.4	0	integrase	integration and excision
UniRef90	UHGV-2039113_48	UniRef90_A0A1M5ZI50	310.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-2039113_48	1507.HMPREF0262_00307	189.0	0	Phage integrase family	N/A
Pfam	UHGV-2039113_48	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2039113_48	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2039113_48	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-2039113_49	K01493	43.9	0.0000000000035	comEB; dCMP deaminase [EC:3.5.4.12]	N/A
PHROG	UHGV-2039113_49	phrog_174	59.7	3.8e-17	dCMP deaminase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2039113_49	UniRef90_A0A2V2CUS9	185.0	0	Cytidine deaminase	N/A
eggNOG-mapper	UHGV-2039113_49	552398.HMPREF0866_02833	182.0	0	MafB19-like deaminase	N/A
Pfam	UHGV-2039113_49	PF00383	N/A	N/A	Cytidine and deoxycytidylate deaminase zinc-binding region	dCMP_cyt_deam_1
COG	UHGV-2039113_49	COG2131	N/A	N/A	Deoxycytidylate deaminase	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2039113	Yes	33,200	54	94	1
UHGV-0074807	No	30,087	54	82	1
UHGV-0186030	No	21,147	53	60	1