Viral OTU vOTU-077457

vOTU: vOTU-077457

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-077457
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00156 → vSUBFAM-01319 → vGENUS-02736 → vSUBGEN-16863 → vOTU-077457
Host Lineage	Bacteria → Spirochaetota → Spirochaetia → Treponematales → Treponemataceae → Treponema_D → Treponema_D sp900541995
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0198272
Biosample ID	N/A
Length	34,090 bps
CheckV Completeness	99.67% (High-quality)
CDS Count	48
CDS Density	94.48%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.67)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0198272_1	phrog_8463	110.9	6.4e-33	transposase	integration and excision
UniRef90	UHGV-0198272_1	UniRef90_A0A843HM74	463.0	0	ISNCY family transposase	N/A
eggNOG-mapper	UHGV-0198272_1	857293.CAAU_1407	239.0	0	PFAM Integrase catalytic	N/A
NCBIFam	UHGV-0198272_1	NF033594.2	N/A	N/A	ISNCY family transposase	N/A
COG	UHGV-0198272_1	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-0198272_1	PF00665,PF13518,PF13276,NF033594,COG2801	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0198272_5	1539298.JO41_08120	1070.0	0	cellulase activity	N/A
COG	UHGV-0198272_5	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0198272_5	PF13550,PF03658,PF14879,MF_00460,NF040662,NF005028,COG4733,COG2914	N/A	N/A	N/A	N/A
KOfam	UHGV-0198272_6	K13695	52.8	0.0000000000000071	nlpC; probable lipoprotein NlpC	N/A
PHROG	UHGV-0198272_6	phrog_329	47.5	0.00000000000015	minor tail protein	tail
UniRef90	UHGV-0198272_6	UniRef90_A0A0A0X0T9	188.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0198272_6	1539298.JO41_08125	188.0	0	NlpC/P60 family	N/A
Pfam	UHGV-0198272_6	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
structural_annotation	UHGV-0198272_6	PF00877,NF008096,COG0791	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0198272_7	1539298.JO41_08130	205.0	0	N/A	N/A
structural_annotation	UHGV-0198272_7	PF08875,MF_00833,TIGR01600,COG4672	N/A	N/A	N/A	N/A
PHROG	UHGV-0198272_8	phrog_384	41.0	0.000000000034	virion structural protein	head and packaging
structural_annotation	UHGV-0198272_8	PF05939,TIGR02217,COG4718	N/A	N/A	N/A	N/A
UniRef90	UHGV-0198272_9	UniRef90_A0A7W8GBU4	271.0	0	Chromosome segregation ATPase	N/A
eggNOG-mapper	UHGV-0198272_9	1125725.HMPREF1325_1340	260.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0198272_9	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0198272_9	PF05537,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0198272_10	phrog_706	117.7	8.3e-35	N/A	unknown function
UniRef90	UHGV-0198272_10	UniRef90_UPI0011C87A99	165.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0198272_10	1539298.JO41_08145	169.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0198272_10	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0198272_10	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0198272_11	phrog_3099	59.8	4.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-0198272_11	1539298.JO41_08150	173.0	0	N/A	N/A
structural_annotation	UHGV-0198272_11	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0198272_12	phrog_913	61.7	1e-17	minor head protein	head and packaging
UniRef90	UHGV-0198272_12	UniRef90_UPI0011C89F23	134.0	4.21e-38	minor capsid protein	N/A
Pfam	UHGV-0198272_12	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
PHROG	UHGV-0198272_13	phrog_556	91.8	5.3e-27	minor head protein	head and packaging
UniRef90	UHGV-0198272_13	UniRef90_U2N122	113.0	5.18e-30	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0198272_13	1539298.JO41_08160	134.0	2.22e-39	Minor capsid protein	N/A
Pfam	UHGV-0198272_13	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0198272_13	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0198272_14	phrog_793	68.1	1.2e-19	head-tail adaptor	connector
UniRef90	UHGV-0198272_14	UniRef90_UPI0011C80D03	63.9	0.0000000000712	putative minor capsid protein	N/A
eggNOG-mapper	UHGV-0198272_14	1539298.JO41_08190	85.5	3.51e-20	Minor capsid protein	N/A
Pfam	UHGV-0198272_14	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
COG	UHGV-0198272_14	COG5652	N/A	N/A	VanZ-like family protein (function unknown)	N/A
structural_annotation	UHGV-0198272_14	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0198272_15	phrog_541	48.5	0.00000000000013	head-tail adaptor	connector
eggNOG-mapper	UHGV-0198272_15	1539298.JO41_08170	111.0	5.4e-30	N/A	N/A
PHROG	UHGV-0198272_16	phrog_422	245.5	0	major head protein	head and packaging
UniRef90	UHGV-0198272_16	UniRef90_R7FBE8	293.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0198272_16	445972.ANACOL_01845	281.0	0	N/A	N/A
PHROG	UHGV-0198272_17	phrog_194	54.3	0.0000000000000027	head scaffolding protein	head and packaging
UniRef90	UHGV-0198272_17	UniRef90_U1FQG8	153.0	3.92364e-44	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0198272_17	1125725.HMPREF1325_1331	153.0	7.00649e-45	Phage minor structural protein GP20	N/A
Pfam	UHGV-0198272_17	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0198272_17	PF06810	N/A	N/A	N/A	N/A
KOfam	UHGV-0198272_21	K01447	102.8	4.7e-30	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0198272_21	phrog_9611	168.4	0	endolysin	lysis
UniRef90	UHGV-0198272_21	UniRef90_M2AXT2	262.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0198272_21	1125725.HMPREF1325_1326	253.0	0	Ami_2	N/A
Pfam	UHGV-0198272_21	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0198272_21	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0198272_21	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0198272_26	1125699.HMPREF9194_01056	95.9	3e-25	N/A	N/A
PHROG	UHGV-0198272_27	phrog_581	317.6	0	minor head protein	head and packaging
UniRef90	UHGV-0198272_27	UniRef90_UPI0011C910CB	476.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0198272_27	1539298.JO41_12785	531.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0198272_27	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0198272_27	PF15644	N/A	N/A	Papain fold toxin 1, glutamine deamidase	Gln_amidase
COG	UHGV-0198272_27	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0198272_27	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0198272_28	phrog_533	221.0	0	portal protein	head and packaging
UniRef90	UHGV-0198272_28	UniRef90_U1FPF4	596.0	0	Portal protein, A118 family	N/A
eggNOG-mapper	UHGV-0198272_28	1125725.HMPREF1325_1322	596.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0198272_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0198272_29	K06909	275.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0198272_29	phrog_3717	110.5	1.3e-32	terminase large subunit	head and packaging
UniRef90	UHGV-0198272_29	UniRef90_M2BSU5	570.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0198272_29	1125725.HMPREF1325_1321	556.0	0	PBSX family phage terminase, large subunit	N/A
Pfam	UHGV-0198272_29	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0198272_29	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
COG	UHGV-0198272_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0198272_29	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0198272_30	UniRef90_E8PPG9	84.7	1.05e-18	Helix-turn-helix Fis-type	N/A
eggNOG-mapper	UHGV-0198272_30	743525.TSC_c10130	84.7	1.76e-19	N/A	N/A
structural_annotation	UHGV-0198272_30	PF13022	N/A	N/A	N/A	N/A
UniRef90	UHGV-0198272_31	UniRef90_A0A884HX15	60.8	0.000000000874	Cell division control protein	N/A
KOfam	UHGV-0198272_32	K00571	135.2	6e-40	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0198272_32	phrog_498	360.8	0	DNA methyltransferase	other
UniRef90	UHGV-0198272_32	UniRef90_U1FPG3	509.0	0	DNA methylase family protein	N/A
eggNOG-mapper	UHGV-0198272_32	1125725.HMPREF1325_1319	509.0	0	N-4 methylation of cytosine	N/A
PADLOC	UHGV-0198272_32	MTase_II_00015	185.5	0	Type II methyltransferase	RM
Pfam	UHGV-0198272_32	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0198272_32	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0198272_32	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0198272_32	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0198272_33	phrog_799	58.7	9.2e-17	DNA methyltransferase	other
COG	UHGV-0198272_33	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
PHROG	UHGV-0198272_34	phrog_5781	110.3	1.6e-32	N/A	unknown function
UniRef90	UHGV-0198272_34	UniRef90_UPI0018E1716F	94.0	2.32e-22	N/A	N/A
eggNOG-mapper	UHGV-0198272_34	742767.HMPREF9456_03346	92.0	1.73e-22	N/A	N/A
Pfam	UHGV-0198272_34	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0198272_34	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
UniRef90	UHGV-0198272_36	UniRef90_A0A843HS63	77.4	6.67e-16	MazG domain-containing protein	N/A
Pfam	UHGV-0198272_36	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
eggNOG-mapper	UHGV-0198272_37	1539298.JO41_12705	87.4	1.99e-19	N/A	N/A
KOfam	UHGV-0198272_38	K02315	153.2	1.4013e-45	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0198272_38	phrog_50	134.0	1.2e-39	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0198272_38	UniRef90_M2BFI9	225.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0198272_38	641147.HMPREF9021_02339	114.0	9.53e-28	IstB-like ATP binding protein	N/A
PADLOC	UHGV-0198272_38	DrmD_00013	40.3	0.000000000075	DrmD	DISARM
Pfam	UHGV-0198272_38	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0198272_38	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
PHROG	UHGV-0198272_39	phrog_15768	83.7	7.2e-30	N/A	unknown function
UniRef90	UHGV-0198272_39	UniRef90_A0A0E2E9N1	101.0	2.21e-23	N/A	N/A
eggNOG-mapper	UHGV-0198272_39	1125725.HMPREF1325_1315	76.3	0.0000000000000443	N/A	N/A
Pfam	UHGV-0198272_39	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0198272_39	PF19808	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0198272_41	1125725.HMPREF1325_1313	151.0	0	N/A	N/A
KOfam	UHGV-0198272_42	K17398	155.2	0	DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]	N/A
PHROG	UHGV-0198272_42	phrog_116	142.1	1.99965e-42	DNA methyltransferase	other
UniRef90	UHGV-0198272_42	UniRef90_A0A1C6CI88	333.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0198272_42	1384065.JAGS01000001_gene3108	312.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0198272_42	MTase_II_00058	107.1	1.8e-32	Type II methyltransferase	RM
Pfam	UHGV-0198272_42	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0198272_42	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0198272_42	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0198272_42	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0198272_43	1539298.JO41_08365	164.0	0	N/A	N/A
structural_annotation	UHGV-0198272_43	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-0198272_44	phrog_7792	141.3	4.60046e-42	N/A	unknown function
eggNOG-mapper	UHGV-0198272_44	1485543.JMME01000021_gene803	73.6	0.000000000000546	N/A	N/A
KOfam	UHGV-0198272_45	K03111	107.1	2.7e-31	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0198272_45	phrog_44	112.7	3.7e-33	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0198272_45	UniRef90_UPI001651FCFE	172.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0198272_45	1124982.MSI_22640	169.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0198272_45	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0198272_45	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0198272_45	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0198272_45	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0198272_45	PF00436,MF_00984,NF005406,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0198272_46	phrog_2139	117.3	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0198272_46	UniRef90_A0A843HI79	372.0	0	PD-(D/E)XK nuclease family protein	N/A
eggNOG-mapper	UHGV-0198272_46	545694.TREPR_0892	318.0	0	N/A	N/A
structural_annotation	UHGV-0198272_46	PF12705,MF_03030,TIGR04328,COG2251	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0198272	Yes	34,090	45	100	1
UHGV-0180638	No	35,615	45	100	1