Viral OTU vOTU-077927

vOTU: vOTU-077927

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-077927
Number of Genomes	11
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-00658 → vGENUS-00533 → vSUBGEN-14555 → vOTU-077927
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0106320
Biosample ID	N/A
Length	39,610 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	56
CDS Density	88.92%
tRNA Count	3
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0106320_2	PF14106	N/A	N/A	N/A	DUF4279
KOfam	UHGV-0106320_3	K14059	106.0	6.8e-31	int; integrase	N/A
PHROG	UHGV-0106320_3	phrog_1	126.8	2.5e-37	integrase	integration and excision
UniRef90	UHGV-0106320_3	UniRef90_A0A2Z4QB94	299.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0106320_3	608534.GCWU000341_02323	84.0	0.00000000000000267	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0106320_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0106320_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0106320_3	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0106320_5	K22300	59.0	1.2e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0106320_5	phrog_4	49.8	0.000000000000084	transcriptional repressor	transcription regulation
UniRef90	UHGV-0106320_5	UniRef90_K1UM29	140.0	4.79999e-40	Helix-turn-helix domain protein (Fragment)	N/A
eggNOG-mapper	UHGV-0106320_5	903814.ELI_1263	134.0	5.73e-39	Helix-turn-helix domain	N/A
Pfam	UHGV-0106320_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0106320_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0106320_5	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0106320_7	1131462.DCF50_p2449	53.5	0.00000215	Bacterial Ig-like domain 2	N/A
NCBIFam	UHGV-0106320_7	NF033223.2	N/A	N/A	YHYH domain-containing protein	N/A
COG	UHGV-0106320_7	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0106320_8	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
Pfam	UHGV-0106320_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0106320_10	PF13744,NF007481,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0106320_14	phrog_14970	248.1	0	N/A	unknown function
UniRef90	UHGV-0106320_14	UniRef90_A0A3P6JH63	209.0	0	Essential recombination function protein	N/A
eggNOG-mapper	UHGV-0106320_14	411470.RUMGNA_02193	210.0	0	double-strand break repair protein	N/A
Pfam	UHGV-0106320_14	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0106320_14	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0106320_14	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-0106320_15	K03111	71.2	2.8e-20	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0106320_15	phrog_44	63.7	4.8e-18	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0106320_15	UniRef90_A0A1C5ZBY6	53.9	0.00000427	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0106320_15	1408437.JNJN01000012_gene314	53.9	0.000000727	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0106320_15	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-0106320_15	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0106320_15	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0106320_16	phrog_8489	203.4	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0106320_16	UniRef90_A0A022N9G2	204.0	0	Replisome organizer	N/A
eggNOG-mapper	UHGV-0106320_16	1139219.I569_01402	194.0	0	DnaD domain protein	N/A
COG	UHGV-0106320_16	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0106320_16	PF09681,TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-0106320_17	phrog_1770	54.6	0.0000000000000023	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0106320_17	536233.CLO_1822	120.0	3.79e-32	N/A	N/A
structural_annotation	UHGV-0106320_17	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
UniRef90	UHGV-0106320_18	UniRef90_UPI001A9B9FB4	271.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0106320_18	1410632.JHWW01000006_gene695	208.0	0	N/A	N/A
Pfam	UHGV-0106320_18	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-0106320_18	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0106320_21	phrog_38832	74.5	5.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-0106320_21	1232443.BAIA02000078_gene48	111.0	1.14e-29	N/A	N/A
structural_annotation	UHGV-0106320_21	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-0106320_22	phrog_3136	154.9	0	N/A	unknown function
UniRef90	UHGV-0106320_22	UniRef90_UPI001CBCD733	167.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0106320_22	97139.C824_00742	70.5	0.000000000000671	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-0106320_22	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0106320_22	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0106320_22	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
Pfam	UHGV-0106320_23	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0106320_23	PF14354,TIGR03655,COG4888	N/A	N/A	N/A	N/A
KOfam	UHGV-0106320_27	K03091	46.5	0.00000000000069	sigH; RNA polymerase sporulation-specific sigma factor	N/A
UniRef90	UHGV-0106320_27	UniRef90_A0A5C7QA78	61.6	0.0000000331	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0106320_27	1329516.JPST01000014_gene654	52.4	0.00000779	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	N/A
Pfam	UHGV-0106320_27	PF04542	N/A	N/A	Sigma-70 region 2	Sigma70_r2
Pfam	UHGV-0106320_27	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
NCBIFam	UHGV-0106320_27	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0106320_27	COG0568	N/A	N/A	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	N/A
structural_annotation	UHGV-0106320_27	PF04542,MF_00961,TIGR02835,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0106320_29	phrog_474	105.1	1.1e-30	phosphofructokinase	other
UniRef90	UHGV-0106320_29	UniRef90_K1TIM3	131.0	1.43e-36	N/A	N/A
eggNOG-mapper	UHGV-0106320_29	1203606.HMPREF1526_00237	96.3	1.16e-23	N/A	N/A
Pfam	UHGV-0106320_29	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0106320_29	PF19905	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0106320_30	1519439.JPJG01000011_gene53	364.0	0	N/A	N/A
eggNOG-mapper	UHGV-0106320_31	693746.OBV_01600	87.0	7.21e-16	N/A	N/A
eggNOG-mapper	UHGV-0106320_32	33035.JPJF01000023_gene3222	48.1	0.00000333	N/A	N/A
PHROG	UHGV-0106320_33	phrog_10091	116.9	1.3e-34	holin	lysis
UniRef90	UHGV-0106320_33	UniRef90_R5MCL9	146.0	4.34403e-44	Holin phage phi LC3 family	N/A
eggNOG-mapper	UHGV-0106320_33	445975.COLSTE_02144	131.0	4.41e-39	Bacteriophage holin	N/A
Pfam	UHGV-0106320_33	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0106320_33	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0106320_33	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0106320_33	COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-0106320_34	K01447	124.5	1.2e-36	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0106320_34	phrog_9611	141.8	4.49957e-42	endolysin	lysis
UniRef90	UHGV-0106320_34	UniRef90_A0A3D1VCL7	379.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0106320_34	97138.C820_00738	230.0	0	Ami_2	N/A
Pfam	UHGV-0106320_34	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
NCBIFam	UHGV-0106320_34	NF040910.1	N/A	N/A	CD1375 family protein	N/A
COG	UHGV-0106320_34	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0106320_34	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
KOfam	UHGV-0106320_36	K03651	66.1	5.8e-19	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	N/A
PHROG	UHGV-0106320_36	phrog_215	90.3	4.2e-26	structural protein with Ig domain	head and packaging
UniRef90	UHGV-0106320_36	UniRef90_UPI001C0D9A0E	63.2	0.000000868	metallophosphoesterase	N/A
eggNOG-mapper	UHGV-0106320_36	485916.Dtox_1961	80.5	0.00000000000117	PFAM Bacterial Ig-like domain (group 2)	N/A
Pfam	UHGV-0106320_36	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-0106320_36	COG3210	N/A	N/A	Large exoprotein involved in heme utilization or adhesion	N/A
structural_annotation	UHGV-0106320_36	PF02368,PF09423,MF_00575,NF003743,NF005261,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0106320_37	phrog_366	42.0	0.000000000011	tail fiber protein	tail
Pfam	UHGV-0106320_37	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0106320_37	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0106320_38	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0106320_39	phrog_24267	84.5	1.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-0106320_39	508419.F8J176_9CAUD	108.0	5.68e-23	peptidoglycan catabolic process	N/A
UniRef90	UHGV-0106320_40	UniRef90_A0A4D7ASB8	441.0	0	N/A	N/A
eggNOG-mapper	UHGV-0106320_40	693746.OBV_01680	476.0	0	N/A	N/A
structural_annotation	UHGV-0106320_40	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0106320_41	1519439.JPJG01000011_gene57	88.2	2.87e-20	N/A	N/A
structural_annotation	UHGV-0106320_41	PF11650	N/A	N/A	N/A	N/A
PHROG	UHGV-0106320_42	phrog_422	120.4	1.7e-35	major head protein	head and packaging
UniRef90	UHGV-0106320_42	UniRef90_K1S1E0	365.0	0	Gp7 (Fragment)	N/A
eggNOG-mapper	UHGV-0106320_42	693746.OBV_01700	214.0	0	N/A	N/A
Pfam	UHGV-0106320_42	PF13287	N/A	N/A	Fn3 associated	Fn3_assoc
structural_annotation	UHGV-0106320_42	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0106320_44	phrog_156	134.9	1.7e-40	portal protein	head and packaging
eggNOG-mapper	UHGV-0106320_44	693746.OBV_01670	554.0	0	N/A	N/A
structural_annotation	UHGV-0106320_44	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0106320_46	K06909	130.6	1.7e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0106320_46	phrog_979	136.6	7.40026e-42	terminase large subunit	head and packaging
UniRef90	UHGV-0106320_46	UniRef90_A0A1M5YHQ5	646.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0106320_46	693746.OBV_01690	519.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0106320_46	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0106320_46	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0106320_46	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0106320_48	phrog_7339	133.8	1.3e-39	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0106320_48	UniRef90_A0A8F2F0X6	268.0	0	Metallophosphoesterase	N/A
eggNOG-mapper	UHGV-0106320_48	443254.Marpi_0340	107.0	4.18e-25	metallophosphoesterase	N/A
Pfam	UHGV-0106320_48	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0106320_48	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-0106320_48	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0106320_49	PF16677	N/A	N/A	N/A	N/A
UniRef90	UHGV-0106320_51	UniRef90_A0A316R7E8	66.6	0.000000000000648	RHH_1 domain-containing protein	N/A
PHROG	UHGV-0106320_52	phrog_15863	171.5	0	N/A	unknown function
UniRef90	UHGV-0106320_52	UniRef90_K1RTM4	230.0	0	DnaJ domain protein	N/A
eggNOG-mapper	UHGV-0106320_52	693746.OBV_01780	178.0	0	DnaJ molecular chaperone homology domain	N/A
Pfam	UHGV-0106320_52	PF00226	N/A	N/A	DnaJ domain	DnaJ
COG	UHGV-0106320_52	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-0106320_53	PF17917	N/A	N/A	N/A	N/A
UniRef90	UHGV-0106320_56	UniRef90_UPI00164AED9E	85.1	2.89e-19	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0106320_56	1235798.C817_04600	79.0	1.24e-17	N/A	N/A
structural_annotation	UHGV-0106320_56	NF040522,COG2944	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0106320	Yes	39,610	57	100	1
UHGV-1396249	No	29,252	57	79	1
UHGV-0110992	No	21,809	58	59	1
UHGV-0110987	No	19,158	57	52	1
UHGV-1532610	No	17,057	57	46	1
UHGV-0105958	No	16,135	57	44	1
UHGV-1568661	No	16,135	57	44	1
UHGV-1650074	No	14,231	58	39	1
UHGV-1621451	No	13,191	58	36	1
UHGV-1865375	No	11,456	58	31	1
UHGV-1552844	No	11,366	57	31	1