Viral OTU vOTU-078328

vOTU: vOTU-078328

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-078328
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-00067 → vGENUS-16793 → vSUBGEN-30634 → vOTU-078328
Host Lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0025407
Biosample ID	SAMEA4766217
Length	41,368 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	75
CDS Density	92.70%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0025407_1	phrog_3300	42.4	0.000000000011	transposase	integration and excision
UniRef90	UHGV-0025407_1	UniRef90_A0A161X6J4	100.0	7.26e-24	PD-(D/E)XK nuclease family transposase	N/A
eggNOG-mapper	UHGV-0025407_1	1196322.A370_05596	75.9	0.0000000000000123	PD-(D/E)XK nuclease family transposase	N/A
Pfam	UHGV-0025407_1	PF12784	N/A	N/A	PD-(D/E)XK nuclease family transposase	PDDEXK_2
COG	UHGV-0025407_1	COG5464	N/A	N/A	Recombination-promoting DNA endonuclease RpnC/YadD	N/A
KOfam	UHGV-0025407_2	K12574	849.6	0	rnj; ribonuclease J [EC:3.1.-.-]	N/A
PHROG	UHGV-0025407_2	phrog_392	49.4	0.000000000000054	metal-dependent hydrolase	other
UniRef90	UHGV-0025407_2	UniRef90_R6I2F2	1016.0	0	Ribonuclease J	N/A
eggNOG-mapper	UHGV-0025407_2	509191.AEDB02000064_gene503	758.0	0	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay	N/A
Pfam	UHGV-0025407_2	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
Pfam	UHGV-0025407_2	PF07521	N/A	N/A	Zn-dependent metallo-hydrolase RNA specificity domain	RMMBL
Pfam	UHGV-0025407_2	PF17770	N/A	N/A	Ribonuclease J C-terminal domain	RNase_J_C
NCBIFam	UHGV-0025407_2	TIGR00649.1	N/A	N/A	RNase J family beta-CASP ribonuclease	N/A
COG	UHGV-0025407_2	COG0595	N/A	N/A	mRNA degradation ribonuclease J1/J2	N/A
HAMAP	UHGV-0025407_2	MF_01491	N/A	N/A	Ribonuclease J [rnj]	N/A
KOfam	UHGV-0025407_3	K14059	74.1	2.8e-21	int; integrase	N/A
PHROG	UHGV-0025407_3	phrog_1	107.7	1.4e-31	integrase	integration and excision
UniRef90	UHGV-0025407_3	UniRef90_A0A1Q6L7V2	519.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0025407_3	558169.AGAV01000001_gene3323	175.0	0	Phage integrase family	N/A
Pfam	UHGV-0025407_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0025407_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0025407_3	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0025407_4	phrog_87	75.7	5.5e-22	metallo-protease	other
UniRef90	UHGV-0025407_4	UniRef90_R5PN39	99.4	4.2e-24	N/A	N/A
eggNOG-mapper	UHGV-0025407_4	1220589.CD32_16955	65.5	0.0000000000197	Zn peptidase	N/A
Pfam	UHGV-0025407_4	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0025407_4	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0025407_4	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0025407_5	K20391	44.6	0.0000000000026	plcR; HTH-type transcriptional regulator, pleiotropic regulator of extracellular virulence genes	N/A
PHROG	UHGV-0025407_5	phrog_8	49.1	0.00000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-0025407_5	UniRef90_A0A8E5Y4B1	58.9	0.0000000075	Helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0025407_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0025407_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0025407_5	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0025407_6	UniRef90_UPI00189D0CCD	68.9	0.0000000000000413	XRE family transcriptional regulator	N/A
structural_annotation	UHGV-0025407_6	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0025407_7	phrog_6058	40.7	0.000000000033	N/A	unknown function
structural_annotation	UHGV-0025407_7	PF12728,NF033787	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025407_10	PF20385	N/A	N/A	N/A	N/A
PHROG	UHGV-0025407_13	phrog_674	149.6	2.24208e-44	N/A	unknown function
UniRef90	UHGV-0025407_13	UniRef90_A0A7X9AE52	135.0	2.51e-34	N/A	N/A
eggNOG-mapper	UHGV-0025407_13	1408437.JNJN01000039_gene373	108.0	5.57e-25	N/A	N/A
Pfam	UHGV-0025407_13	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0025407_13	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-0025407_14	K07455	87.6	2.5e-25	recT; recombination protein RecT	N/A
PHROG	UHGV-0025407_14	phrog_148	95.9	5.1e-28	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025407_14	UniRef90_UPI0012B53C56	66.6	0.00000000395	recombinase RecT	N/A
eggNOG-mapper	UHGV-0025407_14	1231336.L248_2120	58.2	0.000000487	RecT family	N/A
Pfam	UHGV-0025407_14	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0025407_14	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0025407_14	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
PHROG	UHGV-0025407_15	phrog_392	142.1	5.09933e-42	metal-dependent hydrolase	other
UniRef90	UHGV-0025407_15	UniRef90_R5PYB3	401.0	0	Metallo-beta-lactamase domain protein	N/A
eggNOG-mapper	UHGV-0025407_15	665956.HMPREF1032_03101	193.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-0025407_15	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-0025407_15	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0025407_15	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025407_16	PF16454,NF007974	N/A	N/A	N/A	N/A
PHROG	UHGV-0025407_17	phrog_7566	102.3	2.5e-30	N/A	unknown function
eggNOG-mapper	UHGV-0025407_17	508419.F8J187_9CAUD	69.7	0.0000000000000216	N/A	N/A
eggNOG-mapper	UHGV-0025407_18	1123263.AUKY01000096_gene1822	110.0	1.2e-26	C-5 cytosine-specific DNA methylase	N/A
COG	UHGV-0025407_18	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
eggNOG-mapper	UHGV-0025407_19	796940.HMPREF9628_00167	58.2	0.0000000334	N/A	N/A
COG	UHGV-0025407_19	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-0025407_20	phrog_1123	56.1	5.9e-16	N/A	unknown function
UniRef90	UHGV-0025407_20	UniRef90_UPI0012E37870	68.2	0.000000000000963	DNA gyrase	N/A
eggNOG-mapper	UHGV-0025407_20	445972.ANACOL_03346	66.6	0.000000000000586	N/A	N/A
structural_annotation	UHGV-0025407_20	PF03551,TIGR02719,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-0025407_22	phrog_190	132.7	2.4e-39	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025407_22	UniRef90_A0A7C9LJY9	134.0	8.34e-39	N/A	N/A
eggNOG-mapper	UHGV-0025407_22	525255.HMPREF0077_0413	119.0	1.76e-33	N/A	N/A
Pfam	UHGV-0025407_22	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0025407_22	PF06356	N/A	N/A	N/A	N/A
Pfam	UHGV-0025407_25	PF12664	N/A	N/A	N/A	DUF3789
structural_annotation	UHGV-0025407_26	PF09871,TIGR00739	N/A	N/A	N/A	N/A
PHROG	UHGV-0025407_27	phrog_98	87.8	1.1e-25	N/A	unknown function
UniRef90	UHGV-0025407_27	UniRef90_UPI000493F627	86.3	4.34e-19	YopX family protein	N/A
eggNOG-mapper	UHGV-0025407_27	742767.HMPREF9456_02048	81.3	7.27e-18	YopX protein	N/A
Pfam	UHGV-0025407_27	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0025407_27	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0025407_27	PF09643,TIGR01671	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025407_40	PF05263,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0025407_41	phrog_918	127.1	4.4e-38	N/A	unknown function
UniRef90	UHGV-0025407_41	UniRef90_UPI000F4ECE86	142.0	9.23456e-43	N/A	N/A
eggNOG-mapper	UHGV-0025407_41	1504823.CCMM01000008_gene1021	142.0	1.69557e-43	N/A	N/A
Pfam	UHGV-0025407_41	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0025407_41	PF19791	N/A	N/A	N/A	N/A
KOfam	UHGV-0025407_47	K07474	108.6	1.2e-31	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0025407_47	phrog_51	123.3	1.5e-36	terminase small subunit	head and packaging
UniRef90	UHGV-0025407_47	UniRef90_R6HDV5	199.0	0	Prophage LambdaCh01 terminase small subunit	N/A
eggNOG-mapper	UHGV-0025407_47	1235800.C819_00494	141.0	2.29e-41	Terminase small subunit	N/A
Pfam	UHGV-0025407_47	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0025407_47	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0025407_47	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0025407_48	K06909	162.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0025407_48	phrog_3717	142.1	3.59994e-42	terminase large subunit	head and packaging
UniRef90	UHGV-0025407_48	UniRef90_R6H5U4	348.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0025407_48	861454.HMPREF9099_00528	237.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0025407_48	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0025407_48	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0025407_48	PF04466,MF_04145,NF002340,COG5410	N/A	N/A	N/A	N/A
KOfam	UHGV-0025407_49	K06909	223.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0025407_49	phrog_5653	200.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0025407_49	UniRef90_R6HF73	473.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0025407_49	1408823.AXUS01000024_gene2712	353.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0025407_49	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
COG	UHGV-0025407_49	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0025407_49	PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0025407_50	phrog_64	189.3	0	portal protein	head and packaging
UniRef90	UHGV-0025407_50	UniRef90_R6I230	904.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-0025407_50	665956.HMPREF1032_03614	253.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0025407_50	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0025407_50	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
UniRef90	UHGV-0025407_51	UniRef90_R7IWF4	186.0	0	SPP1 gp7 family phage putative head morphogenesis protein	N/A
PHROG	UHGV-0025407_52	phrog_28652	119.6	1.8e-35	N/A	unknown function
eggNOG-mapper	UHGV-0025407_52	1235798.C817_03480	108.0	2.19e-23	head morphogenesis protein, SPP1 gp7 family	N/A
COG	UHGV-0025407_52	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0025407_55	phrog_172	73.9	3.1e-21	head scaffolding protein	head and packaging
UniRef90	UHGV-0025407_55	UniRef90_R6HDW5	346.0	0	Phage scaffold protein	N/A
eggNOG-mapper	UHGV-0025407_55	1499683.CCFF01000014_gene3909	64.7	0.000000000436	N/A	N/A
Pfam	UHGV-0025407_55	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0025407_55	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0025407_56	phrog_422	217.0	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0025407_56	679192.HMPREF9013_1301	239.0	0	N/A	N/A
structural_annotation	UHGV-0025407_56	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025407_58	PF05135,TIGR01560	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025407_59	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0025407_60	665956.HMPREF1032_03623	57.4	0.0000000719	N/A	N/A
structural_annotation	UHGV-0025407_60	TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-0025407_61	UniRef90_H2JDB3	63.9	0.00000000000104	Ribbon-helix-helix protein, copG family	N/A
Pfam	UHGV-0025407_61	PF07878	N/A	N/A	CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	RHH_5
structural_annotation	UHGV-0025407_61	PF07878,NF041793,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-0025407_63	phrog_59	151.0	2.8026e-45	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025407_63	UniRef90_UPI001C3801D7	144.0	2.15e-40	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0025407_63	1206110.L0P6F5_9CAUD	131.0	1.11e-35	sequence-specific DNA binding transcription factor activity	N/A
PADLOC	UHGV-0025407_63	HEase_00016	112.2	1.6e-34	homing endonuclease	RM
Pfam	UHGV-0025407_63	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0025407_63	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0025407_63	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0025407_64	665956.HMPREF1032_03624	58.5	0.00000000357	N/A	N/A
structural_annotation	UHGV-0025407_64	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0025407_65	445972.ANACOL_01851	101.0	2.36e-25	N/A	N/A
structural_annotation	UHGV-0025407_65	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025407_66	PF12363	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0025407_68	1378168.N510_00708	74.7	3.47e-17	N/A	N/A
NCBIFam	UHGV-0025407_68	NF041551.1	N/A	N/A	YlcI/YnfO family protein	N/A
PHROG	UHGV-0025407_69	phrog_806	77.7	1.8e-22	N/A	unknown function
UniRef90	UHGV-0025407_69	UniRef90_A0A1Q6L6T6	358.0	0	N/A	N/A
eggNOG-mapper	UHGV-0025407_69	1280676.AUJO01000001_gene2313	104.0	8.13e-24	N/A	N/A
Pfam	UHGV-0025407_69	PF11611	N/A	N/A	N/A	DUF4352
PHROG	UHGV-0025407_70	phrog_2700	56.9	2.3e-16	N/A	unknown function
UniRef90	UHGV-0025407_70	UniRef90_UPI00067E791F	99.4	8.71e-23	SHOCT domain-containing protein	N/A
Pfam	UHGV-0025407_70	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-0025407_70	PF14470,NF033891,COG3402	N/A	N/A	N/A	N/A
KOfam	UHGV-0025407_71	K10421	46.2	0.00000000000033	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0025407_71	phrog_1535	183.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0025407_71	UniRef90_R6H5W8	674.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-0025407_71	1232443.BAIA02000078_gene18	93.2	2.29e-16	phage tail tape measure protein	N/A
Pfam	UHGV-0025407_71	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
COG	UHGV-0025407_71	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025407_71	PF09486,NF038178,COG1382	N/A	N/A	N/A	N/A
PHROG	UHGV-0025407_72	phrog_1194	103.3	1.6e-30	N/A	unknown function
structural_annotation	UHGV-0025407_72	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0025407_73	phrog_6616	84.6	8.9e-25	tail protein	tail
eggNOG-mapper	UHGV-0025407_73	1414720.CBYM010000002_gene560	82.0	0.000000000000639	Phage minor structural protein	N/A
COG	UHGV-0025407_73	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0025407_73	PF01105,PF04862,NF033848,TIGR04362	N/A	N/A	N/A	N/A
PHROG	UHGV-0025407_74	phrog_372	228.6	0	tail protein	tail
UniRef90	UHGV-0025407_74	UniRef90_UPI0019610394	146.0	4.44e-33	N/A	N/A
eggNOG-mapper	UHGV-0025407_74	442493.A8E284_BPPHE	70.5	0.00000000165	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-0025407_74	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0025407_74	PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0025407	Yes	41,368	27	100	1