Viral OTU vOTU-078373

vOTU: vOTU-078373

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-078373
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00096 → vSUBFAM-00794 → vGENUS-01969 → vSUBGEN-27533 → vOTU-078373
Host Lineage	Bacteria → Actinobacteriota → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → Actinomyces oris_C
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-1493153
Biosample ID	SAMEA2737943
Length	42,791 bps
CheckV Completeness	98.51% (High-quality)
CDS Count	53
CDS Density	88.65%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 98.51)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1493153_6	PF21382	N/A	N/A	N/A	N/A
PHROG	UHGV-1493153_7	phrog_155	134.7	6.6e-40	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1493153_7	UniRef90_UPI00068BA6AB	155.0	6.72623e-44	ERF family protein	N/A
eggNOG-mapper	UHGV-1493153_7	1086751.G3ME42_9CAUD	152.0	8.88423e-43	ERF superfamily	N/A
Pfam	UHGV-1493153_7	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1493153_7	PF04404,MF_00984,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-1493153_8	phrog_5168	55.9	6.7e-16	N/A	unknown function
PHROG	UHGV-1493153_9	phrog_14515	65.6	6.8e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1493153_9	UniRef90_UPI001865DE73	65.5	0.00000000000793	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1493153_9	1203568.HMPREF1484_02023	70.9	0.00000000000000301	HNH nucleases	N/A
COG	UHGV-1493153_9	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1493153_14	phrog_244	105.0	7.5e-31	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1493153_14	UniRef90_G3M5E8	144.0	3.3505e-42	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1493153_14	1273125.Rrhod_0728	140.0	1.54998e-41	N/A	N/A
structural_annotation	UHGV-1493153_14	COG1591	N/A	N/A	N/A	N/A
Pfam	UHGV-1493153_15	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-1493153_15	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1493153_16	K03111	85.6	1.1e-24	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1493153_16	phrog_44	89.3	6.5e-26	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1493153_16	UniRef90_UPI001555899C	129.0	1.45e-35	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1493153_16	521393.JH806633_gene1261	117.0	5.8e-32	Single-strand binding protein family	N/A
Pfam	UHGV-1493153_16	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1493153_16	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1493153_16	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1493153_16	PF00436,MF_00984,NF005851,COG2965	N/A	N/A	N/A	N/A
PHROG	UHGV-1493153_21	phrog_284	186.3	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1493153_21	UniRef90_A0A2K9VGT5	153.0	4.58e-39	Repair endonuclease	N/A
eggNOG-mapper	UHGV-1493153_21	1156844.KB891852_gene3727	169.0	1.4013e-45	N/A	N/A
Pfam	UHGV-1493153_21	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
structural_annotation	UHGV-1493153_21	PF12850,PF01047,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1493153_22	PF14606,NF011908	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1493153_23	PF13620,TIGR02423	N/A	N/A	N/A	N/A
PHROG	UHGV-1493153_25	phrog_443	65.5	1.2e-18	holin	lysis
UniRef90	UHGV-1493153_25	UniRef90_A0A7T0PDU3	79.3	9.83e-18	Holin	N/A
eggNOG-mapper	UHGV-1493153_25	1349820.M707_02785	54.7	0.00000000916	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1493153_25	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1493153_25	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-1493153_26	K07273	131.8	6.7e-39	acm; lysozyme	N/A
PHROG	UHGV-1493153_26	phrog_291	136.8	1.3e-40	endolysin	lysis
UniRef90	UHGV-1493153_26	UniRef90_U1RWY8	379.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-1493153_26	203123.OEOE_0206	120.0	6.18e-26	lysozyme activity	N/A
Pfam	UHGV-1493153_26	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1493153_26	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1493153_26	PF01183,COG3757	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1493153_28	PF07902,PF14400,NF012201	N/A	N/A	N/A	N/A
PHROG	UHGV-1493153_29	phrog_9116	107.5	1e-31	tail protein	tail
UniRef90	UHGV-1493153_29	UniRef90_A0A512NCR2	103.0	1.52e-23	Tail protein	N/A
eggNOG-mapper	UHGV-1493153_29	665956.HMPREF1032_02700	110.0	1.42e-27	PFAM Tail Collar domain protein	N/A
Pfam	UHGV-1493153_29	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
COG	UHGV-1493153_29	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1493153_29	PF07484,COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-1493153_30	phrog_31	41.5	0.0000000000087	baseplate hub protein Tal	tail
UniRef90	UHGV-1493153_30	UniRef90_A0A2G1PH73	517.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1493153_30	1205910.B005_2762	225.0	0	N/A	N/A
Pfam	UHGV-1493153_30	PF00041	N/A	N/A	Fibronectin type III domain	fn3
COG	UHGV-1493153_30	COG3164	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1493153_30	PF14594,PF00041,PF16323,MF_04116,NF033848,COG3500,COG3401	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1493153_31	PF20195,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1493153_32	phrog_305	292.2	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1493153_32	525246.HMPREF0058_0754	299.0	0	tape measure	N/A
COG	UHGV-1493153_32	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1493153_34	phrog_117	57.7	1.6e-16	major tail protein	tail
UniRef90	UHGV-1493153_34	UniRef90_A0A0B4ZYD4	63.5	0.0000000154	Major tail protein	N/A
eggNOG-mapper	UHGV-1493153_34	208439.AJAP_28135	76.3	0.0000000000000647	N/A	N/A
Pfam	UHGV-1493153_34	PF01833	N/A	N/A	IPT/TIG domain	TIG
structural_annotation	UHGV-1493153_34	PF01833,PF04630,TIGR01603,COG3353,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1493153_35	PF16807	N/A	N/A	N/A	N/A
Pfam	UHGV-1493153_36	PF17395	N/A	N/A	N/A	DUF5403
structural_annotation	UHGV-1493153_36	PF17395,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1493153_37	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1493153_38	phrog_137	73.3	2.6e-21	head-tail adaptor Ad1	connector
UniRef90	UHGV-1493153_38	UniRef90_UPI001F20FEB4	100.0	4.82e-24	phage Gp19/Gp15/Gp42 family protein	N/A
eggNOG-mapper	UHGV-1493153_38	68170.KL590469_gene1552	76.3	0.00000000000000214	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1493153_38	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1493153_38	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1493153_39	phrog_10	133.1	2.6e-39	major head protein	head and packaging
UniRef90	UHGV-1493153_39	UniRef90_UPI001E419B4C	186.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1493153_39	1155718.KB891925_gene2428	135.0	2.83e-34	Phage capsid family	N/A
Pfam	UHGV-1493153_39	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1493153_39	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1493153_39	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1493153_39	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1493153_41	phrog_15127	164.7	0	head protein	head and packaging
UniRef90	UHGV-1493153_41	UniRef90_A0A3B9NPC7	125.0	1.57e-26	INTEIN_C_TER domain-containing protein	N/A
eggNOG-mapper	UHGV-1493153_41	1121926.AXWO01000004_gene1162	145.0	1.09e-33	Phage minor capsid protein 2	N/A
NCBIFam	UHGV-1493153_41	TIGR01445.1	N/A	N/A	intein N-terminal splicing region	N/A
COG	UHGV-1493153_41	COG1372	N/A	N/A	Intein/homing endonuclease	N/A
PHROG	UHGV-1493153_42	phrog_104	262.7	0	portal protein	head and packaging
UniRef90	UHGV-1493153_42	UniRef90_UPI001E4EFA46	315.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1493153_42	525246.HMPREF0058_0742	300.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1493153_42	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1493153_42	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1493153_43	phrog_9	211.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1493153_43	UniRef90_C0W4E7	620.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1493153_43	525246.HMPREF0058_0741	620.0	0	Terminase	N/A
Pfam	UHGV-1493153_43	PF14528	N/A	N/A	LAGLIDADG-like domain	LAGLIDADG_3
COG	UHGV-1493153_43	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1493153_43	PF05203,PF20441,PF03354,MF_04146,MF_01420,NF005852,TIGR01547,COG4626,COG1372	N/A	N/A	N/A	N/A
PHROG	UHGV-1493153_44	phrog_226	105.9	3e-31	minor tail protein	tail
eggNOG-mapper	UHGV-1493153_44	525246.HMPREF0058_0740	126.0	3.22e-35	N/A	N/A
PHROG	UHGV-1493153_50	phrog_1032	70.0	1e-20	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1493153_50	UniRef90_UPI00187CB2B6	74.7	0.00000000000635	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1493153_50	1124991.MU9_2679	59.3	0.000000349	Helix-turn-helix domain	N/A
Pfam	UHGV-1493153_50	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1493153_50	COG0640	N/A	N/A	DNA-binding transcriptional regulator, ArsR family	N/A
structural_annotation	UHGV-1493153_50	PF03428,MF_01909,NF008122,COG2345	N/A	N/A	N/A	N/A
KOfam	UHGV-1493153_51	K02314	253.0	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1493153_51	phrog_19	222.4	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1493153_51	UniRef90_UPI001C58A644	295.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1493153_51	1414742.V5R9D2_9CAUD	194.0	0	DNA helicase activity	N/A
Pfam	UHGV-1493153_51	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
structural_annotation	UHGV-1493153_51	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1493153_52	PF12728,NF033787,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-1493153_53	phrog_338	62.9	7.2e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1493153_53	1177594.MIC448_380001	60.1	0.000000228	HNH endonuclease	N/A
Pfam	UHGV-1493153_53	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1493153_53	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1493153	Yes	42,791	62	99	1