Viral OTU vOTU-082775

vOTU: vOTU-082775

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-082775
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00707 → vGENUS-04031 → vSUBGEN-19051 → vOTU-082775
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0138849
Biosample ID	N/A
Length	40,594 bps
CheckV Completeness	96.54% (High-quality)
CDS Count	47
CDS Density	89.95%
tRNA Count	2
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 96.54)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0138849_1	K19117	110.3	4.2039e-45	csd1, cas8c; CRISPR-associated protein Csd1	N/A
eggNOG-mapper	UHGV-0138849_1	1123075.AUDP01000035_gene2468	211.0	0	CRISPR-associated protein, Csd1 family	N/A
PADLOC	UHGV-0138849_1	cd09757	100.7	3.4e-39	CAS-I-C; effector_LS	CRISPR-CAS
Pfam	UHGV-0138849_1	PF09709	N/A	N/A	CRISPR-associated protein (Cas_Csd1)	Cas_Csd1
COG	UHGV-0138849_1	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
KOfam	UHGV-0138849_2	K03111	145.7	4.80645e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0138849_2	phrog_44	136.9	1.4e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0138849_2	UniRef90_A0A810QFR8	201.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0138849_2	1007096.BAGW01000023_gene151	192.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0138849_2	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0138849_2	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0138849_2	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0138849_2	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0138849_2	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0138849_3	phrog_7566	90.7	1e-26	N/A	unknown function
UniRef90	UHGV-0138849_3	UniRef90_A0A8D9UHC0	134.0	2.32e-39	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0138849_3	693746.OBV_24070	121.0	1.1e-34	N/A	N/A
PHROG	UHGV-0138849_4	phrog_374	50.1	0.000000000000052	HNH endonuclease	DNA, RNA and nucleotide metabolism
PHROG	UHGV-0138849_5	phrog_72	63.6	1.6e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0138849_5	UniRef90_A0A8D9PDS2	184.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0138849_5	445972.ANACOL_01825	124.0	1.57e-33	N/A	N/A
Pfam	UHGV-0138849_5	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0138849_5	PF05772	N/A	N/A	N/A	N/A
UniRef90	UHGV-0138849_6	UniRef90_B0PAM4	153.0	1.06499e-43	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-0138849_6	PF09588,TIGR04328,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-0138849_7	UniRef90_A0A845QLQ8	182.0	0	N/A	N/A
eggNOG-mapper	UHGV-0138849_7	33035.JPJF01000135_gene5082	125.0	5.67e-33	N/A	N/A
structural_annotation	UHGV-0138849_7	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
Pfam	UHGV-0138849_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0138849_9	PF13560,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0138849_11	UniRef90_A0A8D9PDM8	64.3	0.00000000000359	Pyocin activator protein	N/A
structural_annotation	UHGV-0138849_11	PF11112,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-0138849_12	UniRef90_A0A1C7FQD9	82.0	6.42e-19	Transcriptional regulator	N/A
Pfam	UHGV-0138849_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0138849_12	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0138849_18	phrog_3292	40.1	0.000000000048	N/A	unknown function
Pfam	UHGV-0138849_18	PF13619	N/A	N/A	KTSC domain	KTSC
COG	UHGV-0138849_18	COG0433	N/A	N/A	Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domains	N/A
structural_annotation	UHGV-0138849_18	PF13619	N/A	N/A	N/A	N/A
UniRef90	UHGV-0138849_19	UniRef90_A0A8D9UHA6	162.0	0	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-0138849_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0138849_19	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0138849_20	K14059	163.8	0	int; integrase	N/A
PHROG	UHGV-0138849_20	phrog_1	168.6	0	integrase	integration and excision
UniRef90	UHGV-0138849_20	UniRef90_A0A1C5W824	517.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0138849_20	693746.OBV_41260	288.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0138849_20	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0138849_20	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0138849_20	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0138849_20	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0138849_21	UniRef90_A0A7M1RTM1	64.7	0.000000000855	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0138849_21	1408437.JNJN01000043_gene801	73.6	0.0000000000000681	N/A	N/A
structural_annotation	UHGV-0138849_22	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0138849_23	phrog_16490	46.3	0.00000000000082	N/A	unknown function
PHROG	UHGV-0138849_24	phrog_22984	43.1	0.0000000000083	N/A	unknown function
structural_annotation	UHGV-0138849_26	PF04545,MF_00674,NF009179,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0138849_27	K01447	73.8	3.1e-21	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0138849_27	phrog_5182	149.6	2.8026e-44	endolysin	lysis
UniRef90	UHGV-0138849_27	UniRef90_A0A658JW32	249.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0138849_27	573061.Clocel_3960	244.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0138849_27	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0138849_27	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0138849_27	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0138849_27	PF01510,PF01471,TIGR03979,COG5632,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0138849_28	phrog_443	56.3	8.4e-16	holin	lysis
UniRef90	UHGV-0138849_28	UniRef90_UPI0002E2AC7F	97.4	3.5e-25	holin	N/A
eggNOG-mapper	UHGV-0138849_28	1469948.JPNB01000002_gene3855	91.7	1.2e-23	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0138849_28	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
PHROG	UHGV-0138849_29	phrog_22978	806.1	0	N/A	unknown function
UniRef90	UHGV-0138849_29	UniRef90_A0A1Y4WLF7	1059.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0138849_29	1410650.JHWL01000003_gene2814	547.0	0	N/A	N/A
Pfam	UHGV-0138849_29	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-0138849_29	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
UniRef90	UHGV-0138849_30	UniRef90_A0A1V5S4F9	147.0	1.31e-37	Putative peptidoglycan binding domain protein	N/A
eggNOG-mapper	UHGV-0138849_30	1410650.JHWL01000003_gene2815	147.0	7.21e-38	N/A	N/A
PHROG	UHGV-0138849_31	phrog_1863	70.7	4.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-0138849_31	1226322.HMPREF1545_04027	110.0	6.95e-31	N/A	N/A
PHROG	UHGV-0138849_32	phrog_27545	155.4	0	N/A	unknown function
UniRef90	UHGV-0138849_32	UniRef90_D1PRE7	152.0	1.68156e-44	Glycosyl hydrolase, family 18 family protein	N/A
eggNOG-mapper	UHGV-0138849_32	1226322.HMPREF1545_00129	155.0	0	N/A	N/A
Pfam	UHGV-0138849_32	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-0138849_33	phrog_24451	41.2	0.000000000027	N/A	unknown function
eggNOG-mapper	UHGV-0138849_33	1408437.JNJN01000040_gene189	100.0	9.07e-26	N/A	N/A
PHROG	UHGV-0138849_34	phrog_372	132.8	3.5e-39	tail protein	tail
eggNOG-mapper	UHGV-0138849_34	658655.HMPREF0988_00525	118.0	9.83e-25	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-0138849_34	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0138849_34	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0138849_35	NF038340	N/A	N/A	N/A	N/A
PHROG	UHGV-0138849_36	phrog_511	234.1	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0138849_36	1410650.JHWL01000003_gene2827	350.0	0	N/A	N/A
structural_annotation	UHGV-0138849_36	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0138849_37	phrog_12105	114.9	4.5e-34	N/A	unknown function
eggNOG-mapper	UHGV-0138849_37	1226322.HMPREF1545_03850	77.4	1.41e-16	N/A	N/A
PHROG	UHGV-0138849_38	phrog_15239	52.8	0.0000000000000052	N/A	unknown function
PHROG	UHGV-0138849_39	phrog_1357	267.6	0	major head protein	head and packaging
UniRef90	UHGV-0138849_39	UniRef90_A0A1I0BH03	369.0	0	Major capsid protein, N4-gp56 family	N/A
eggNOG-mapper	UHGV-0138849_39	748224.HMPREF9436_01399	354.0	0	N/A	N/A
Pfam	UHGV-0138849_39	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0138849_39	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0138849_39	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0138849_40	phrog_13908	258.5	0	N/A	unknown function
UniRef90	UHGV-0138849_40	UniRef90_UPI0012DFC3C8	126.0	1.75e-29	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0138849_40	1410650.JHWL01000003_gene2831	132.0	6.69e-34	N/A	N/A
KOfam	UHGV-0138849_41	K07584	61.3	1.9e-17	N/A	N/A
PHROG	UHGV-0138849_41	phrog_4478	60.6	1.9e-17	peptidase	other
UniRef90	UHGV-0138849_41	UniRef90_UPI001C027204	55.5	0.000000136	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0138849_41	1347392.CCEZ01000026_gene2980	54.3	0.0000000668	Cysteine protease Prp	N/A
Pfam	UHGV-0138849_41	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0138849_41	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0138849_41	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0138849_42	phrog_156	331.1	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0138849_42	1410650.JHWL01000003_gene2833	582.0	0	N/A	N/A
structural_annotation	UHGV-0138849_42	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0138849_43	K06909	146.7	2.00386e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0138849_43	phrog_979	140.2	4.49817e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0138849_43	UniRef90_UPI0010311CEE	653.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0138849_43	1410650.JHWL01000003_gene2834	619.0	0	N/A	N/A
Pfam	UHGV-0138849_43	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0138849_43	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0138849_43	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0138849_44	UniRef90_UPI0018AC41F1	168.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0138849_44	1226322.HMPREF1545_00042	141.0	1.51999e-41	N/A	N/A
structural_annotation	UHGV-0138849_44	PF13542	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0138849_45	742738.HMPREF9460_02503	101.0	1.04e-26	N/A	N/A
structural_annotation	UHGV-0138849_45	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0138849_46	UniRef90_UPI001F2DACFB	99.4	7.47e-25	zinc ribbon domain-containing protein	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0138849	Yes	40,594	61	97	1