Viral OTU vOTU-083013

vOTU: vOTU-083013

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-083013
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00197 → vGENUS-19452 → vSUBGEN-37648 → vOTU-083013
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminococcus_C → Ruminococcus_C sp000433635
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-2049129
Biosample ID	SAMN05971542
Length	33,582 bps
CheckV Completeness	96.26% (High-quality)
CDS Count	44
CDS Density	90.92%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 96.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-2049129_1	UniRef90_A0A3R6S8H9	124.0	1.93e-34	HTH domain-containing protein	N/A
eggNOG-mapper	UHGV-2049129_1	411473.RUMCAL_00908	223.0	0	DeoR-like helix-turn-helix domain	N/A
Pfam	UHGV-2049129_1	PF08220	N/A	N/A	DeoR-like helix-turn-helix domain	HTH_DeoR
COG	UHGV-2049129_1	COG2378	N/A	N/A	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	N/A
PHROG	UHGV-2049129_2	phrog_11623	297.2	0	N/A	unknown function
UniRef90	UHGV-2049129_2	UniRef90_A0A3C0II00	548.0	0	N/A	N/A
eggNOG-mapper	UHGV-2049129_2	476272.RUMHYD_01443	390.0	0	N/A	N/A
Pfam	UHGV-2049129_2	PF12873	N/A	N/A	N/A	DUF3825
COG	UHGV-2049129_2	COG1278	N/A	N/A	Cold shock protein, CspA family	N/A
structural_annotation	UHGV-2049129_2	PF12873	N/A	N/A	N/A	N/A
UniRef90	UHGV-2049129_3	UniRef90_A0A374VLK4	148.0	8.40779e-45	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-2049129_3	PF12645	N/A	N/A	Helix-turn-helix domain	HTH_16
UniRef90	UHGV-2049129_4	UniRef90_R7FAG7	280.0	0	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-2049129_4	1235798.C817_02678	92.8	5.32e-22	Sigma-70, region 4	N/A
Pfam	UHGV-2049129_4	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-2049129_4	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-2049129_4	PF08281,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2049129_5	397288.C806_00432	56.6	0.000000307	N/A	N/A
KOfam	UHGV-2049129_6	K20459	195.4	0	nukF, mcdF, sboF; lantibiotic transport system ATP-binding protein	N/A
PHROG	UHGV-2049129_6	phrog_293	163.2	0	ABC transporter	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2049129_6	UniRef90_R7FH08	427.0	0	ABC-type multidrug transport system ATPase component	N/A
eggNOG-mapper	UHGV-2049129_6	1304880.JAGB01000002_gene1943	255.0	0	Abc transporter	N/A
Pfam	UHGV-2049129_6	PF00005	N/A	N/A	ABC transporter	ABC_tran
COG	UHGV-2049129_6	COG1131	N/A	N/A	ABC-type multidrug transport system, ATPase component	N/A
structural_annotation	UHGV-2049129_6	PF00005,MF_01005,TIGR03740,COG1131	N/A	N/A	N/A	N/A
UniRef90	UHGV-2049129_7	UniRef90_UPI00189A7253	104.0	6.76e-23	N/A	N/A
eggNOG-mapper	UHGV-2049129_7	1211817.CCAT010000014_gene1402	94.0	1.47e-19	CytoplasmicMembrane, score 9.99	N/A
UniRef90	UHGV-2049129_8	UniRef90_UPI0006D0EBD5	241.0	0	ABC transporter permease	N/A
eggNOG-mapper	UHGV-2049129_8	318464.IO99_05400	98.2	2.35e-21	N/A	N/A
structural_annotation	UHGV-2049129_8	PF12730,TIGR03518,COG4200	N/A	N/A	N/A	N/A
Pfam	UHGV-2049129_10	PF10916	N/A	N/A	N/A	DUF2712
KOfam	UHGV-2049129_12	K07800	44.0	0.0000000000037	agrD; AgrD protein	N/A
UniRef90	UHGV-2049129_12	UniRef90_A0A374VN94	56.6	0.000000000959	Cyclic lactone autoinducer peptide	N/A
NCBIFam	UHGV-2049129_12	TIGR04223.1	N/A	N/A	cyclic lactone autoinducer peptide	N/A
KOfam	UHGV-2049129_13	K07813	123.5	1.5e-36	agrB; accessory gene regulator B	N/A
PHROG	UHGV-2049129_13	phrog_10353	66.1	5.5e-19	N/A	unknown function
UniRef90	UHGV-2049129_13	UniRef90_UPI001D00ACCB	365.0	0	accessory gene regulator B family protein	N/A
eggNOG-mapper	UHGV-2049129_13	411473.RUMCAL_02075	316.0	0	Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide	N/A
Pfam	UHGV-2049129_13	PF04647	N/A	N/A	Accessory gene regulator B	AgrB
COG	UHGV-2049129_13	COG4512	N/A	N/A	Accessory gene regulator protein AgrB	N/A
structural_annotation	UHGV-2049129_13	PF04647,MF_00784,NF002210,COG4512	N/A	N/A	N/A	N/A
KOfam	UHGV-2049129_14	K07706	128.6	5.3e-38	agrC, blpH, fsrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]	N/A
UniRef90	UHGV-2049129_14	UniRef90_U2KQB0	769.0	0	HATPase_c_5 domain-containing protein	N/A
eggNOG-mapper	UHGV-2049129_14	411473.RUMCAL_02074	769.0	0	N/A	N/A
Pfam	UHGV-2049129_14	PF14501	N/A	N/A	GHKL domain	HATPase_c_5
COG	UHGV-2049129_14	COG0642	N/A	N/A	Signal transduction histidine kinase	N/A
structural_annotation	UHGV-2049129_14	PF14501,MF_01837,NF008298,COG2972	N/A	N/A	N/A	N/A
KOfam	UHGV-2049129_15	K07705	131.8	5.3e-39	lytT, lytR; two-component system, LytTR family, response regulator LytT	N/A
PHROG	UHGV-2049129_15	phrog_8810	108.1	8.4e-32	N/A	unknown function
UniRef90	UHGV-2049129_15	UniRef90_U2K7H9	459.0	0	Stage 0 sporulation protein A homolog	N/A
eggNOG-mapper	UHGV-2049129_15	411473.RUMCAL_02073	459.0	0	chemotaxis response regulator protein-glutamate methylesterase 1	N/A
Pfam	UHGV-2049129_15	PF00072	N/A	N/A	Response regulator receiver domain	Response_reg
Pfam	UHGV-2049129_15	PF04397	N/A	N/A	LytTr DNA-binding domain	LytTR
COG	UHGV-2049129_15	COG3279	N/A	N/A	DNA-binding response regulator, LytR/AlgR family	N/A
structural_annotation	UHGV-2049129_15	PF04397,PF00072,MF_00981,NF010684,COG3279	N/A	N/A	N/A	N/A
KOfam	UHGV-2049129_16	K14059	63.2	6.7e-18	int; integrase	N/A
PHROG	UHGV-2049129_16	phrog_1	53.5	0.0000000000000051	integrase	integration and excision
UniRef90	UHGV-2049129_16	UniRef90_UPI001D0E0F9F	60.8	0.000000000174	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-2049129_16	411473.RUMCAL_02072	122.0	2.34e-32	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2049129_16	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2049129_16	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
KOfam	UHGV-2049129_17	K14059	73.3	4.8e-21	int; integrase	N/A
UniRef90	UHGV-2049129_17	UniRef90_A0A373VMX9	149.0	2.42999e-41	Core-binding (CB) domain-containing protein	N/A
eggNOG-mapper	UHGV-2049129_17	411473.RUMCAL_02072	333.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2049129_17	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
COG	UHGV-2049129_17	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
UniRef90	UHGV-2049129_18	UniRef90_U2KYV7	624.0	0	TIR domain-containing protein	N/A
eggNOG-mapper	UHGV-2049129_18	411473.RUMCAL_00135	624.0	0	N/A	N/A
PADLOC	UHGV-2049129_18	spbK-10RX8D9V212-alignment	182.4	0	NA	spbK
KOfam	UHGV-2049129_19	K07273	173.3	0	acm; lysozyme	N/A
PHROG	UHGV-2049129_19	phrog_291	144.8	5.89947e-43	endolysin	lysis
UniRef90	UHGV-2049129_19	UniRef90_A0A3D5KVU8	580.0	0	Peptidase_M15_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-2049129_19	1384066.JAGT01000001_gene920	454.0	0	hydrolase, family 25	N/A
Pfam	UHGV-2049129_19	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
Pfam	UHGV-2049129_19	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-2049129_19	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2049129_19	PF01183,PF08291,NF007557,COG3757,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-2049129_20	phrog_199	86.7	2.4e-25	holin	lysis
UniRef90	UHGV-2049129_20	UniRef90_A0A352TKQ2	180.0	0	Holin	N/A
eggNOG-mapper	UHGV-2049129_20	742740.HMPREF9474_02333	169.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-2049129_20	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-2049129_20	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-2049129_20	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-2049129_20	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2049129_21	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-2049129_22	phrog_35590	264.7	0	N/A	unknown function
eggNOG-mapper	UHGV-2049129_22	411473.RUMCAL_00613	119.0	1.47e-28	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-2049129_22	COG2931	N/A	N/A	Ca2+-binding protein, RTX toxin-related	N/A
structural_annotation	UHGV-2049129_22	PF07675,NF038128	N/A	N/A	N/A	N/A
KOfam	UHGV-2049129_23	K08135	56.5	1.7e-16	COL15A; collagen type XV alpha	N/A
PHROG	UHGV-2049129_23	phrog_25979	180.3	0	N/A	unknown function
eggNOG-mapper	UHGV-2049129_23	411473.RUMCAL_00613	196.0	0	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-2049129_23	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-2049129_23	COG2931	N/A	N/A	Ca2+-binding protein, RTX toxin-related	N/A
structural_annotation	UHGV-2049129_23	PF09294	N/A	N/A	N/A	N/A
PHROG	UHGV-2049129_24	phrog_18805	380.1	0	N/A	unknown function
UniRef90	UHGV-2049129_24	UniRef90_UPI001D020966	421.0	0	leucine-rich repeat domain-containing protein	N/A
eggNOG-mapper	UHGV-2049129_24	411473.RUMCAL_01636	217.0	0	regulation of response to stimulus	N/A
Pfam	UHGV-2049129_24	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-2049129_24	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
KOfam	UHGV-2049129_26	K05636	41.9	0.00000000000026	LAMB1; laminin, beta 1	N/A
PHROG	UHGV-2049129_26	phrog_1533	447.7	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-2049129_26	1051501.AYTL01000027_gene761	246.0	0	Phage tail tape measure protein	N/A
Pfam	UHGV-2049129_26	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
Pfam	UHGV-2049129_26	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
NCBIFam	UHGV-2049129_26	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-2049129_26	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-2049129_26	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-2049129_27	phrog_3558	46.2	1.1e-28	tail protein	tail
COG	UHGV-2049129_27	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-2049129_27	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-2049129_28	UniRef90_UPI001D005450	124.0	4.79e-30	phage tail family protein	N/A
eggNOG-mapper	UHGV-2049129_28	1123075.AUDP01000020_gene1523	83.2	5.14e-16	phage tail	N/A
COG	UHGV-2049129_28	COG4722	N/A	N/A	Phage-related protein YomH	N/A
PHROG	UHGV-2049129_29	phrog_7423	134.1	3.7e-40	N/A	unknown function
UniRef90	UHGV-2049129_29	UniRef90_UPI0008A1BA71	113.0	8.38e-30	phenylalanine racemase	N/A
eggNOG-mapper	UHGV-2049129_29	1347392.CCEZ01000005_gene1243	103.0	3.07e-26	N/A	N/A
PHROG	UHGV-2049129_30	phrog_2115	40.0	0.000000000079	tail protein	tail
structural_annotation	UHGV-2049129_30	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-2049129_31	phrog_1407	151.6	2.8026e-45	major tail protein	tail
UniRef90	UHGV-2049129_31	UniRef90_UPI001D0042ED	241.0	0	phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-2049129_31	936154.STP_1264	218.0	0	Phage tail tube protein	N/A
Pfam	UHGV-2049129_31	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-2049129_31	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
COG	UHGV-2049129_31	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
structural_annotation	UHGV-2049129_31	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2049129_32	phrog_176	81.8	7.6e-24	tail terminator	connector
UniRef90	UHGV-2049129_32	UniRef90_UPI001D024781	174.0	0	N/A	N/A
eggNOG-mapper	UHGV-2049129_32	1235792.C808_05344	153.0	0	N/A	N/A
Pfam	UHGV-2049129_32	PF16807	N/A	N/A	N/A	DUF5072
structural_annotation	UHGV-2049129_32	PF16807,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-2049129_33	phrog_5	72.6	8.1e-21	tail completion or Neck1 protein	connector
UniRef90	UHGV-2049129_33	UniRef90_UPI0019673462	95.1	1.27e-22	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2049129_33	1125712.HMPREF1316_1514	91.3	7.29e-22	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-2049129_33	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-2049129_33	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-2049129_34	UniRef90_C5WIA4	63.5	0.0000000000894	N/A	N/A
eggNOG-mapper	UHGV-2049129_34	1232430.CAVG010000113_gene1018	63.9	0.0000000000109	N/A	N/A
structural_annotation	UHGV-2049129_34	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2049129_35	phrog_132	54.8	0.0000000000000015	head-tail adaptor	connector
UniRef90	UHGV-2049129_35	UniRef90_A0A1I5G9Z5	85.9	1.44e-19	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-2049129_35	936154.STP_1288	78.6	2.17e-17	N/A	N/A
structural_annotation	UHGV-2049129_35	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-2049129_36	phrog_544	172.8	0	major head protein	head and packaging
UniRef90	UHGV-2049129_36	UniRef90_R9C6R9	263.0	0	N/A	N/A
eggNOG-mapper	UHGV-2049129_36	1347392.CCEZ01000005_gene1236	259.0	0	N/A	N/A
structural_annotation	UHGV-2049129_36	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-2049129_37	phrog_172	113.8	1.9e-33	head scaffolding protein	head and packaging
UniRef90	UHGV-2049129_37	UniRef90_UPI001D01A578	151.0	4.06377e-43	N/A	N/A
eggNOG-mapper	UHGV-2049129_37	1235792.C808_05338	112.0	2.42e-28	N/A	N/A
Pfam	UHGV-2049129_37	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-2049129_37	PF14265	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2049129_38	1071085.KK033114_gene203	50.1	0.00000185	COG0526 Thiol-disulfide isomerase and thioredoxins	N/A
Pfam	UHGV-2049129_38	PF00085	N/A	N/A	Thioredoxin	Thioredoxin
COG	UHGV-2049129_38	COG0526	N/A	N/A	Thiol-disulfide isomerase or thioredoxin	N/A
structural_annotation	UHGV-2049129_38	PF00085,MF_01319,NF006898,COG0526	N/A	N/A	N/A	N/A
PHROG	UHGV-2049129_39	phrog_774	57.2	3.8e-16	N/A	unknown function
eggNOG-mapper	UHGV-2049129_39	397290.C810_05225	116.0	6.39e-33	N/A	N/A
PHROG	UHGV-2049129_40	phrog_478	112.1	3.1e-33	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-2049129_40	UniRef90_R6R5K5	171.0	0	Protein 64 protein	N/A
eggNOG-mapper	UHGV-2049129_40	478749.BRYFOR_08526	139.0	6.10994e-41	N/A	N/A
eggNOG-mapper	UHGV-2049129_41	936596.HMPREF1495_2378	79.3	1.14e-18	N/A	N/A
PHROG	UHGV-2049129_42	phrog_581	293.7	0	minor head protein	head and packaging
UniRef90	UHGV-2049129_42	UniRef90_U2K8C2	532.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-2049129_42	411473.RUMCAL_01925	532.0	0	N/A	N/A
Pfam	UHGV-2049129_42	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2049129_42	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-2049129_43	phrog_533	319.8	0	portal protein	head and packaging
UniRef90	UHGV-2049129_43	UniRef90_U2KRP5	560.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-2049129_43	411473.RUMCAL_01924	560.0	0	N/A	N/A
structural_annotation	UHGV-2049129_43	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2049129_44	K06909	113.5	2.6e-33	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2049129_44	phrog_10250	164.0	0	N/A	unknown function
UniRef90	UHGV-2049129_44	UniRef90_A0A3D5KXX3	543.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2049129_44	411473.RUMCAL_01923	334.0	0	Phage terminase, large subunit, PBSX family	N/A
NCBIFam	UHGV-2049129_44	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2049129_44	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2049129_44	PF20441,MF_04148,TIGR01547,COG5323	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2049129	Yes	33,582	43	96	1
UHGV-2150266	No	17,761	44	51	1