Viral OTU vOTU-084532

vOTU: vOTU-084532

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-084532
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00135 → vSUBFAM-00506 → vGENUS-06557 → vSUBGEN-29769 → vOTU-084532
Host Lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0000380
Biosample ID	N/A
Length	51,128 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	82
CDS Density	89.77%
tRNA Count	6
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0000380_1	K14059	232.6	0	int; integrase	N/A
PHROG	UHGV-0000380_1	phrog_1	196.6	0	integrase	integration and excision
UniRef90	UHGV-0000380_1	UniRef90_A0A8E9MD50	169.0	2.8026e-45	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0000380_1	1204534.J9QD18_9CAUD	163.0	4.2039e-44	Phage integrase family	N/A
Pfam	UHGV-0000380_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0000380_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
structural_annotation	UHGV-0000380_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0000380_4	K22299	64.3	2.8e-18	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0000380_4	phrog_8	80.9	2e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0000380_4	UniRef90_A0A7C9H8I2	76.3	0.00000000000000129	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0000380_4	1094508.Tsac_0848	73.6	0.00000000000000347	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0000380_4	retron_type_VI_hth_cluster2_1	44.8	0.0000000000028	N/A	Retron
Pfam	UHGV-0000380_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0000380_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0000380_4	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0000380_5	K23779	45.9	0.0000000000013	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
UniRef90	UHGV-0000380_5	UniRef90_A0A7X8JZI6	53.1	0.000000434	Helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0000380_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0000380_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0000380_5	PF01381,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0000380_7	phrog_270	78.4	1.3e-22	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000380_7	UniRef90_UPI00143119EB	97.4	1.19e-20	replication initiator protein A	N/A
eggNOG-mapper	UHGV-0000380_7	445973.CLOBAR_01681	117.0	3.92e-28	N/A	N/A
structural_annotation	UHGV-0000380_8	PF11417,PF08209	N/A	N/A	N/A	N/A
PHROG	UHGV-0000380_19	phrog_14970	210.5	0	N/A	unknown function
UniRef90	UHGV-0000380_19	UniRef90_A0A1C5NV07	159.0	1.68156e-44	DNA damage response protein A	N/A
eggNOG-mapper	UHGV-0000380_19	1128398.Curi_c14240	170.0	0	double-strand break repair protein	N/A
Pfam	UHGV-0000380_19	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0000380_19	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0000380_19	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0000380_20	phrog_2139	118.9	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000380_20	UniRef90_W4V8L9	278.0	0	N/A	N/A
eggNOG-mapper	UHGV-0000380_20	428127.EUBDOL_01249	246.0	0	N/A	N/A
structural_annotation	UHGV-0000380_20	PF12705,MF_03030,TIGR04328,COG2251	N/A	N/A	N/A	N/A
PHROG	UHGV-0000380_22	phrog_6077	263.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0000380_22	1235790.C805_00025	158.0	6.16992e-42	N/A	N/A
structural_annotation	UHGV-0000380_22	PF02518,MF_00505,NF003555,COG0326	N/A	N/A	N/A	N/A
KOfam	UHGV-0000380_25	K03111	101.2	1.7e-29	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0000380_25	phrog_44	112.7	3.7e-33	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000380_25	UniRef90_A0A0D0EHL1	112.0	4.23e-29	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0000380_25	632245.CLP_2706	103.0	2.84e-26	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0000380_25	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0000380_25	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0000380_25	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0000380_25	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0000380_25	PF00436,MF_00984,NF005242,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0000380_27	phrog_850	128.8	1.6e-38	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000380_27	UniRef90_UPI001960D49A	115.0	1.88e-24	N/A	N/A
eggNOG-mapper	UHGV-0000380_27	443254.Marpi_0401	135.0	4.14e-32	N/A	N/A
Pfam	UHGV-0000380_27	PF11443	N/A	N/A	N/A	DUF2828
COG	UHGV-0000380_27	COG2304	N/A	N/A	Secreted protein containing bacterial Ig-like domain and vWFA domain	N/A
structural_annotation	UHGV-0000380_27	PF11443,MF_01340,NF041674,COG1240	N/A	N/A	N/A	N/A
KOfam	UHGV-0000380_29	K01160	63.1	7.7e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0000380_29	phrog_140	135.4	2.8e-40	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000380_29	UniRef90_A0A358PKU1	108.0	1.25e-27	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0000380_29	588581.Cpap_1486	94.0	1.79e-22	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0000380_29	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0000380_29	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0000380_29	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000380_34	PF16677	N/A	N/A	N/A	N/A
UniRef90	UHGV-0000380_35	UniRef90_UPI0019591118	73.9	2.66e-16	ribonucleoside-triphosphate reductase	N/A
eggNOG-mapper	UHGV-0000380_35	411464.DESPIG_00855	72.8	1.44e-16	Anaerobic ribonucleoside-triphosphate reductase	N/A
Pfam	UHGV-0000380_35	PF13597	N/A	N/A	Anaerobic ribonucleoside-triphosphate reductase	NRDD
COG	UHGV-0000380_35	COG1328	N/A	N/A	Anaerobic ribonucleoside-triphosphate reductase	N/A
KOfam	UHGV-0000380_37	K14060	106.2	3.7e-31	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0000380_37	phrog_125	132.0	4e-39	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000380_37	UniRef90_A0A3A9IGT8	112.0	3.23e-27	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0000380_37	1235835.C814_02364	109.0	7.13e-27	Resolvase, N terminal domain	N/A
Pfam	UHGV-0000380_37	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0000380_37	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0000380_37	PF00239,NF009949,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0000380_40	999413.HMPREF1094_04343	59.7	0.00000000729	N/A	N/A
structural_annotation	UHGV-0000380_40	PF18847	N/A	N/A	N/A	N/A
KOfam	UHGV-0000380_41	K14680	98.6	5e-29	E6.5.1.3; RNA ligase [EC:6.5.1.3]	N/A
PHROG	UHGV-0000380_41	phrog_8238	710.5	0	RNA ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000380_41	UniRef90_A0A7X2N4V7	596.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0000380_41	411474.COPEUT_00782	567.0	0	AAA domain	N/A
Pfam	UHGV-0000380_41	PF13671	N/A	N/A	AAA domain	AAA_33
Pfam	UHGV-0000380_41	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
Pfam	UHGV-0000380_41	PF09511	N/A	N/A	RNA ligase	RNA_lig_T4_1
COG	UHGV-0000380_41	COG0639	N/A	N/A	Diadenosine tetraphosphatase ApaH/serine/threonine protein phosphatase, PP2A family	N/A
structural_annotation	UHGV-0000380_41	PF09511,PF13671,MF_04149,MF_01443,MF_03171,TIGR04075,COG5324,COG4639,COG2129	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000380_42	PF05732,MF_01177,TIGR01610,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0000380_46	phrog_362	49.0	0.00000000000011	transcriptional repressor	transcription regulation
UniRef90	UHGV-0000380_46	UniRef90_A0A1H8LAR9	56.6	0.000000016	LexA DNA binding domain-containing protein	N/A
Pfam	UHGV-0000380_46	PF01726	N/A	N/A	LexA DNA binding domain	LexA_DNA_bind
COG	UHGV-0000380_46	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0000380_46	PF01726,MF_00732,NF006812,COG0640	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0000380_48	537007.BLAHAN_06602	75.5	2.61e-17	N/A	N/A
PHROG	UHGV-0000380_49	phrog_6596	77.6	1.4e-22	N/A	unknown function
structural_annotation	UHGV-0000380_50	PF01381	N/A	N/A	N/A	N/A
PHROG	UHGV-0000380_53	phrog_774	65.3	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0000380_53	397290.C810_05225	83.2	8.98e-20	N/A	N/A
structural_annotation	UHGV-0000380_55	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0000380_57	phrog_38	170.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0000380_57	UniRef90_UPI0013EC3644	103.0	1.17e-19	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0000380_57	428127.EUBDOL_01551	222.0	0	chromosome segregation	N/A
COG	UHGV-0000380_57	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000380_57	PF17289,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0000380_58	phrog_64	153.9	1.4013e-45	portal protein	head and packaging
UniRef90	UHGV-0000380_58	UniRef90_UPI001D06C00B	318.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0000380_58	1121866.AUGK01000003_gene1429	269.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0000380_58	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0000380_58	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000380_59	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0000380_60	phrog_1328	134.2	6.8e-40	major head protein	head and packaging
UniRef90	UHGV-0000380_60	UniRef90_UPI00164DD2D5	346.0	0	N/A	N/A
eggNOG-mapper	UHGV-0000380_60	1203606.HMPREF1526_00325	209.0	0	N/A	N/A
Pfam	UHGV-0000380_60	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-0000380_60	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000380_61	PF05135	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000380_62	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0000380_64	UniRef90_UPI001D096349	84.0	3.83e-17	HK97 gp10 family phage protein	N/A
structural_annotation	UHGV-0000380_64	PF17395,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000380_65	PF08873,COG5003	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000380_66	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0000380_67	1121333.JMLH01000047_gene1012	48.9	0.00000719	N/A	N/A
Pfam	UHGV-0000380_67	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0000380_67	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0000380_68	1121333.JMLH01000047_gene1011	52.4	0.00000081	N/A	N/A
PHROG	UHGV-0000380_69	phrog_1535	101.2	1.5e-33	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0000380_69	246194.CHY_1662	97.8	9.96e-18	lysine exporter protein (LysE YggA)	N/A
COG	UHGV-0000380_69	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-0000380_69	PF20155	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000380_71	PF20458,TIGR01633,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0000380_72	phrog_6616	50.6	0.000000000000016	tail protein	tail
COG	UHGV-0000380_72	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0000380_73	phrog_372	222.6	0	tail protein	tail
UniRef90	UHGV-0000380_73	UniRef90_A0A415H839	116.0	5.19e-24	Pilus assembly protein	N/A
eggNOG-mapper	UHGV-0000380_73	1235802.C823_05263	107.0	7.08e-22	N/A	N/A
Pfam	UHGV-0000380_73	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0000380_73	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0000380_73	PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A
KOfam	UHGV-0000380_74	K10268	55.1	9.9e-16	FBXL2_20; F-box and leucine-rich repeat protein 2/20	N/A
PHROG	UHGV-0000380_74	phrog_22899	79.9	1.2e-23	N/A	unknown function
Pfam	UHGV-0000380_74	PF03382	N/A	N/A	N/A	DUF285
NCBIFam	UHGV-0000380_74	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
structural_annotation	UHGV-0000380_76	PF03382	N/A	N/A	N/A	N/A
Pfam	UHGV-0000380_79	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
KOfam	UHGV-0000380_80	K01447	60.7	3.2e-17	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0000380_80	phrog_7698	198.8	0	endolysin	lysis
UniRef90	UHGV-0000380_80	UniRef90_A0A1C6GY80	260.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0000380_80	293826.Amet_2548	239.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0000380_80	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0000380_80	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
KOfam	UHGV-0000380_81	K07002	75.8	7.6e-22	RBBP9; serine hydrolase [EC:3.-.-.-]	N/A
UniRef90	UHGV-0000380_81	UniRef90_R6CXD5	347.0	0	YdeN-like protein	N/A
eggNOG-mapper	UHGV-0000380_81	1461579.CCNK01000024_gene677	76.3	0.00000000000000884	esterase of the alpha beta hydrolase fold	N/A
Pfam	UHGV-0000380_81	PF06821	N/A	N/A	Serine hydrolase	Ser_hydrolase
COG	UHGV-0000380_81	COG3545	N/A	N/A	Predicted esterase of the alpha/beta hydrolase fold	N/A
KOfam	UHGV-0000380_82	K03574	62.7	5.9e-18	mutT, NUDT15, MTH2; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]	N/A
PHROG	UHGV-0000380_82	phrog_1198	54.6	0.0000000000000017	MutT/NUDIX hydrolase	other
UniRef90	UHGV-0000380_82	UniRef90_R5Y852	182.0	0	NUDIX hydrolase	N/A
eggNOG-mapper	UHGV-0000380_82	1536770.R50345_14070	105.0	4.65e-27	Nudix family	N/A
Pfam	UHGV-0000380_82	PF00293	N/A	N/A	NUDIX domain	NUDIX
COG	UHGV-0000380_82	COG1051	N/A	N/A	ADP-ribose pyrophosphatase YjhB, NUDIX family	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0000380	Yes	51,128	27	100	1