Viral OTU vOTU-085592

vOTU: vOTU-085592

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-085592
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-05811 → vGENUS-13424 → vSUBGEN-21541 → vOTU-085592
Host Lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Lactococcus → Lactococcus lactis
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0039967
Biosample ID	N/A
Length	37,730 bps
CheckV Completeness	94.32% (High-quality)
CDS Count	53
CDS Density	90.64%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 94.32)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0039967_1	K14059	236.7	0	int; integrase	N/A
PHROG	UHGV-0039967_1	phrog_1	216.0	0	integrase	integration and excision
UniRef90	UHGV-0039967_1	UniRef90_A2RN22	729.0	0	Phage integrase	N/A
eggNOG-mapper	UHGV-0039967_1	416870.llmg_2142	729.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0039967_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0039967_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0039967_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0039967_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_3	phrog_87	59.1	6.1e-17	metallo-protease	other
UniRef90	UHGV-0039967_3	UniRef90_UPI001F06756D	141.0	1.55e-40	zinc peptidase	N/A
eggNOG-mapper	UHGV-0039967_3	416870.llmg_2140	285.0	0	Zn peptidase	N/A
COG	UHGV-0039967_3	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0039967_3	PF13058,MF_00745,NF003339,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0039967_4	K07729	67.0	3.7e-19	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0039967_4	phrog_8	60.8	3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0039967_4	UniRef90_A0A552YZP8	315.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0039967_4	416870.llmg_2139	194.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0039967_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0039967_4	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
PHROG	UHGV-0039967_7	phrog_1305	100.8	1.2e-29	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039967_7	UniRef90_UPI001E414452	153.0	6.76827e-43	N/A	N/A
eggNOG-mapper	UHGV-0039967_7	626523.GCWU000342_01044	94.7	5.08e-21	N/A	N/A
structural_annotation	UHGV-0039967_7	COG2250	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039967_8	UniRef90_T0USK6	152.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0039967_8	12390.Q9G0B7_9CAUD	65.1	0.000000000000545	sequence-specific DNA binding	N/A
structural_annotation	UHGV-0039967_8	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_10	phrog_1726	119.4	3.4e-35	anti-repressor	transcription regulation
UniRef90	UHGV-0039967_10	UniRef90_UPI000E556722	512.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0039967_10	1231377.C426_0589	164.0	0	Phage regulatory protein	N/A
Pfam	UHGV-0039967_10	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0039967_10	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0039967_10	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0039967_10	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_11	phrog_10458	119.6	9.3e-36	N/A	unknown function
UniRef90	UHGV-0039967_11	UniRef90_UPI001F055759	108.0	4.87e-29	transcriptional regulator	N/A
structural_annotation	UHGV-0039967_11	PF20063,NF033499	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_13	phrog_2211	68.5	1.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0039967_13	398512.JQKC01000015_gene4713	89.0	1.49e-21	N/A	N/A
PHROG	UHGV-0039967_14	phrog_5450	136.1	4.80001e-41	N/A	unknown function
UniRef90	UHGV-0039967_14	UniRef90_Q77JM5	144.0	5.74532e-44	Orf11	N/A
Pfam	UHGV-0039967_14	PF07193	N/A	N/A	N/A	DUF1408
KOfam	UHGV-0039967_15	K07465	51.1	0.000000000000016	K07465; putative RecB family exonuclease	N/A
PHROG	UHGV-0039967_15	phrog_1227	203.1	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039967_15	UniRef90_D3LCD3	534.0	0	N/A	N/A
Pfam	UHGV-0039967_15	PF12684	N/A	N/A	N/A	DUF3799
structural_annotation	UHGV-0039967_15	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_16	phrog_124	89.5	4.1e-26	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039967_16	UniRef90_A0A4P6JCI3	562.0	0	AAA domain-containing protein	N/A
Pfam	UHGV-0039967_16	PF13479	N/A	N/A	AAA domain	AAA_24
eggNOG-mapper	UHGV-0039967_17	717605.Theco_3709	48.9	0.00000213	N/A	N/A
KOfam	UHGV-0039967_18	K02315	77.0	3e-22	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0039967_18	phrog_5968	315.1	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039967_18	UniRef90_A0A6M0M7S3	353.0	0	Replisome organizer	N/A
eggNOG-mapper	UHGV-0039967_18	201847.Q8LTN2_9CAUD	213.0	0	calcium ion binding	N/A
Pfam	UHGV-0039967_18	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
Pfam	UHGV-0039967_18	PF06926	N/A	N/A	Putative replisome organiser protein C-terminus	Rep_Org_C
NCBIFam	UHGV-0039967_18	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0039967_18	PF09681,PF09524,TIGR01714,TIGR02220,COG0640	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039967_19	UniRef90_A0A2Z5Z7Z8	448.0	0	Putative topoisomerase	N/A
eggNOG-mapper	UHGV-0039967_19	416870.llmg_2124	452.0	0	N/A	N/A
eggNOG-mapper	UHGV-0039967_20	272623.L47020	51.6	0.0000000605	N/A	N/A
PHROG	UHGV-0039967_21	phrog_2882	314.1	0	DNA methyltransferase	other
UniRef90	UHGV-0039967_21	UniRef90_A0A0V8E6V9	532.0	0	Putative C5 methylase (MAV1virus-like)	N/A
eggNOG-mapper	UHGV-0039967_21	565653.EGBG_01954	228.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
Pfam	UHGV-0039967_21	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0039967_21	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0039967_21	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_22	phrog_8817	116.1	1.3e-34	N/A	unknown function
UniRef90	UHGV-0039967_22	UniRef90_A0A0V8BYP7	114.0	2.29e-32	N/A	N/A
structural_annotation	UHGV-0039967_22	MF_00273,NF010188	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_23	phrog_31993	115.5	2.4e-34	N/A	unknown function
UniRef90	UHGV-0039967_23	UniRef90_D2BQE2	151.0	1.4013e-45	N/A	N/A
PHROG	UHGV-0039967_25	phrog_4298	83.0	2.3e-24	N/A	unknown function
UniRef90	UHGV-0039967_26	UniRef90_D2BK63	181.0	0	N/A	N/A
PHROG	UHGV-0039967_27	phrog_30014	187.3	0	N/A	unknown function
UniRef90	UHGV-0039967_27	UniRef90_A0A0H1RVM8	191.0	0	Phage transcriptional regulator, ArpU family	N/A
KOfam	UHGV-0039967_28	K07451	51.6	0.000000000000018	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0039967_28	phrog_5956	97.8	7.5e-29	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039967_28	UniRef90_A0A084ABI8	214.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0039967_28	1158610.UC3_02358	126.0	1.66e-36	HNH nucleases	N/A
Pfam	UHGV-0039967_28	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0039967_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0039967_28	PF05766,NF008448	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_29	phrog_2343	117.1	5.2e-35	terminase small subunit	head and packaging
UniRef90	UHGV-0039967_29	UniRef90_A0A084ABI9	193.0	0	Putative phage protein	N/A
eggNOG-mapper	UHGV-0039967_29	1231377.C426_0906	147.0	1.12104e-44	N/A	N/A
Pfam	UHGV-0039967_29	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0039967_29	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_30	phrog_9	315.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0039967_30	UniRef90_A0A2Z5Z6U5	1147.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0039967_30	1231377.C426_0905	981.0	0	Phage Terminase	N/A
Pfam	UHGV-0039967_30	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0039967_30	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0039967_30	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0039967_30	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_31	phrog_12	85.2	2.8e-25	portal protein	head and packaging
UniRef90	UHGV-0039967_31	UniRef90_A0A0V8EB61	729.0	0	Portal protein phage associated	N/A
eggNOG-mapper	UHGV-0039967_31	423476.A3F643_9CAUD	169.0	0	Phage portal protein	N/A
Pfam	UHGV-0039967_31	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0039967_31	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0039967_32	K01358	120.3	2.2e-35	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0039967_32	phrog_94	194.2	0	head maturation protease	head and packaging
UniRef90	UHGV-0039967_32	UniRef90_A0A0H1RP30	489.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0039967_32	1231377.C426_0903	183.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0039967_32	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0039967_32	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0039967_32	PF00574,MF_00444,NF011089,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_33	phrog_10	119.0	4.3e-35	major head protein	head and packaging
UniRef90	UHGV-0039967_33	UniRef90_A0A0V8BEL0	704.0	0	N/A	N/A
eggNOG-mapper	UHGV-0039967_33	1231377.C426_0902	335.0	0	Phage capsid family	N/A
Pfam	UHGV-0039967_33	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0039967_33	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0039967_33	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0039967_33	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_34	phrog_933	45.3	0.0000000000014	N/A	unknown function
PHROG	UHGV-0039967_35	phrog_749	94.9	5.1e-28	N/A	unknown function
UniRef90	UHGV-0039967_35	UniRef90_A0A0V8BFH2	179.0	0	N/A	N/A
eggNOG-mapper	UHGV-0039967_35	1121864.OMO_01323	66.2	0.000000000000682	N/A	N/A
UniRef90	UHGV-0039967_36	UniRef90_A0A0H1RNL7	253.0	0	N/A	N/A
eggNOG-mapper	UHGV-0039967_36	999425.HMPREF9186_02038	93.2	1.02e-22	N/A	N/A
structural_annotation	UHGV-0039967_36	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039967_37	UniRef90_A0A5C5BGY4	198.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0039967_37	1423816.BACQ01000026_gene939	68.9	0.00000000000043	N/A	N/A
Pfam	UHGV-0039967_37	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0039967_37	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_38	phrog_78	75.2	9.1e-22	tail terminator	connector
UniRef90	UHGV-0039967_38	UniRef90_A0A0H1RNB1	227.0	0	tRNA (Guanine-N(7)-)-methyltransferase, trmB	N/A
eggNOG-mapper	UHGV-0039967_38	1231377.C426_0898	136.0	1.11e-39	N/A	N/A
structural_annotation	UHGV-0039967_38	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_39	phrog_88	101.0	1.2e-29	major tail protein	tail
UniRef90	UHGV-0039967_39	UniRef90_A0A0H1RPI3	391.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0039967_39	1231377.C426_0897	184.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0039967_39	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-0039967_39	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0039967_39	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_40	phrog_187	66.7	3.6e-19	head-tail adaptor	connector
UniRef90	UHGV-0039967_40	UniRef90_A0A0A7T228	75.9	9.08e-16	N/A	N/A
structural_annotation	UHGV-0039967_40	PF06894,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_42	phrog_34415	156.2	0	N/A	unknown function
UniRef90	UHGV-0039967_42	UniRef90_UPI001D066015	452.0	0	FxLYD domain-containing protein	N/A
eggNOG-mapper	UHGV-0039967_42	60520.HR47_10145	164.0	0	N/A	N/A
NCBIFam	UHGV-0039967_42	NF038353.1	N/A	N/A	FxLYD domain-containing protein	N/A
PHROG	UHGV-0039967_43	phrog_1293	1274.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0039967_43	UniRef90_UPI001897F94E	1899.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0039967_43	1231377.C426_0893	771.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0039967_43	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
Pfam	UHGV-0039967_43	PF11269	N/A	N/A	N/A	DUF3069
NCBIFam	UHGV-0039967_43	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0039967_43	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0039967_43	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_44	phrog_202	319.1	0	distal tail protein Dit	tail
UniRef90	UHGV-0039967_44	UniRef90_UPI000E556CE9	1022.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0039967_44	374526.A5GYM9_9CAUD	529.0	0	Phage tail protein	N/A
Pfam	UHGV-0039967_44	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0039967_44	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-0039967_44	PF05709,PF21708,TIGR01633,NF041449,COG4722,COG3506	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_45	phrog_6468	837.5	0	tail fiber protein; host specificity	tail
UniRef90	UHGV-0039967_45	UniRef90_UPI000E4C864D	2172.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0039967_45	201847.Q8LTK0_9CAUD	1004.0	0	peptidoglycan catabolic process	N/A
structural_annotation	UHGV-0039967_45	PF14594,PF08931,PF13895,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0039967_46	phrog_8250	119.3	9e-36	N/A	unknown function
PHROG	UHGV-0039967_47	phrog_6453	128.4	1.5e-38	N/A	unknown function
UniRef90	UHGV-0039967_47	UniRef90_A0A0V8CHP4	200.0	0	N/A	N/A
eggNOG-mapper	UHGV-0039967_47	272623.L81862	129.0	1.49e-37	N/A	N/A
PHROG	UHGV-0039967_48	phrog_6918	143.6	4.69435e-43	holin	lysis
UniRef90	UHGV-0039967_48	UniRef90_UPI000A1FEC4C	228.0	0	phage holin	N/A
Pfam	UHGV-0039967_48	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-0039967_48	TIGR01673.1	N/A	N/A	phage holin	N/A
KOfam	UHGV-0039967_49	K07273	149.3	3.64338e-44	acm; lysozyme	N/A
PHROG	UHGV-0039967_49	phrog_291	165.5	0	endolysin	lysis
UniRef90	UHGV-0039967_49	UniRef90_Q8LTJ6	556.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-0039967_49	201847.Q8LTJ6_9CAUD	556.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0039967_49	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
structural_annotation	UHGV-0039967_49	PF01183,NF004283,COG3757	N/A	N/A	N/A	N/A
KOfam	UHGV-0039967_50	K03741	145.4	5.80138e-43	arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]	N/A
PHROG	UHGV-0039967_50	phrog_12429	64.0	1.9e-18	N/A	unknown function
UniRef90	UHGV-0039967_50	UniRef90_D2BK26	265.0	0	Phage protein, protein-tyrosine-phosphatase	N/A
eggNOG-mapper	UHGV-0039967_50	272623.L11493	228.0	0	Catalyzes the reduction of arsenate As(V) to arsenite As(III)	N/A
Pfam	UHGV-0039967_50	PF01451	N/A	N/A	Low molecular weight phosphotyrosine protein phosphatase	LMWPc
NCBIFam	UHGV-0039967_50	TIGR02691.1	N/A	N/A	arsenate reductase (thioredoxin)	N/A
COG	UHGV-0039967_50	COG0394	N/A	N/A	Protein-tyrosine-phosphatase	N/A
PHROG	UHGV-0039967_51	phrog_1281	116.7	1.3e-34	N/A	unknown function
UniRef90	UHGV-0039967_51	UniRef90_UPI000E4FC300	357.0	0	N/A	N/A
eggNOG-mapper	UHGV-0039967_51	1423755.BAML01000054_gene1656	125.0	4.17e-34	N/A	N/A
Pfam	UHGV-0039967_51	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0039967_51	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039967_51	PF13274,COG3600	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039967_52	UniRef90_UPI0001E198EB	58.2	0.00000662	YIP1 family protein	N/A
eggNOG-mapper	UHGV-0039967_52	1423755.BAML01000054_gene1655	71.2	0.0000000000143	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0039967	Yes	37,730	35	94	1