Viral OTU vOTU-086955

vOTU: vOTU-086955

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-086955
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-08550 → vSUBGEN-08636 → vOTU-086955
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0028445
Biosample ID	N/A
Length	39,207 bps
CheckV Completeness	92.97% (High-quality)
CDS Count	62
CDS Density	92.14%
tRNA Count	4
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 92.97)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0028445_1	657322.FPR_28140	92.4	3.13e-23	N/A	N/A
COG	UHGV-0028445_1	COG0789	N/A	N/A	DNA-binding transcriptional regulator, MerR family	N/A
KOfam	UHGV-0028445_2	K14059	120.3	2.9e-35	int; integrase	N/A
PHROG	UHGV-0028445_2	phrog_1	105.2	8.1e-31	integrase	integration and excision
UniRef90	UHGV-0028445_2	UniRef90_E2ZNV1	735.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-0028445_2	748224.HMPREF9436_03382	735.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0028445_2	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0028445_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0028445_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0028445_2	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0028445_3	UniRef90_A0A6N7TLT0	346.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0028445_3	266265.Bxe_A3948	55.5	0.0000000655	Helix-turn-helix domain	N/A
Pfam	UHGV-0028445_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0028445_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0028445_3	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0028445_6	1280696.ATVY01000034_gene3237	101.0	1.35e-23	Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation	N/A
Pfam	UHGV-0028445_6	PF08461	N/A	N/A	Ribonuclease R winged-helix domain	HTH_12
eggNOG-mapper	UHGV-0028445_7	641112.ACOK01000103_gene519	52.8	0.00000698	N/A	N/A
UniRef90	UHGV-0028445_9	UniRef90_A0A6N7TMW8	280.0	0	HTH cro/C1-type domain-containing protein	N/A
COG	UHGV-0028445_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0028445_11	phrog_1221	269.2	0	N/A	unknown function
UniRef90	UHGV-0028445_11	UniRef90_E2ZNU3	577.0	0	Phage/plasmid-related protein TIGR03299	N/A
eggNOG-mapper	UHGV-0028445_11	748224.HMPREF9436_03374	577.0	0	N/A	N/A
Pfam	UHGV-0028445_11	PF06067	N/A	N/A	N/A	DUF932
NCBIFam	UHGV-0028445_11	TIGR03299.1	N/A	N/A	phage/plasmid-like protein TIGR03299	N/A
structural_annotation	UHGV-0028445_11	PF06067,TIGR03299	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_13	phrog_7711	95.3	4.7e-28	N/A	unknown function
UniRef90	UHGV-0028445_13	UniRef90_UPI001C38CAD2	97.1	5.78e-22	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-0028445_13	1304866.K413DRAFT_1204	108.0	3.09e-28	N/A	N/A
UniRef90	UHGV-0028445_15	UniRef90_E2ZNT7	136.0	1.20999e-40	HTH_17 domain-containing protein	N/A
Pfam	UHGV-0028445_15	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-0028445_15	PF12728,MF_01155,TIGR01764,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-0028445_16	UniRef90_UPI00130EBC54	143.0	4.27396e-43	N/A	N/A
eggNOG-mapper	UHGV-0028445_16	445972.ANACOL_01800	49.7	0.000000709	N/A	N/A
COG	UHGV-0028445_16	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0028445_16	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028445_17	PF12270,NF040944	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_18	phrog_674	143.1	1.99965e-42	N/A	unknown function
UniRef90	UHGV-0028445_18	UniRef90_A0A3E2UDL3	363.0	0	N/A	N/A
eggNOG-mapper	UHGV-0028445_18	742722.HMPREF9463_00201	83.6	0.00000000000000186	N/A	N/A
Pfam	UHGV-0028445_18	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0028445_18	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_19	phrog_2760	187.5	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028445_19	UniRef90_A0A3E2UDI4	408.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-0028445_19	1235794.C811_01355	155.0	5.94151e-43	RecT family	N/A
Pfam	UHGV-0028445_19	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0028445_19	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-0028445_19	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0028445_19	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
Pfam	UHGV-0028445_20	PF00436	N/A	N/A	Single-strand binding protein family	SSB
structural_annotation	UHGV-0028445_20	PF00436,MF_00720,NF004512,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0028445_21	K02086	68.4	1.1e-19	dnaD; DNA replication protein	N/A
PHROG	UHGV-0028445_21	phrog_186	76.4	5e-22	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028445_21	UniRef90_A0A3E2UDK7	278.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0028445_21	718252.FP2_01000	77.0	0.00000000000013	N/A	N/A
Pfam	UHGV-0028445_21	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0028445_21	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0028445_21	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0028445_21	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0028445_22	PF11417	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028445_23	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028445_25	MF_00273,COG2157	N/A	N/A	N/A	N/A
KOfam	UHGV-0028445_31	K00390	113.1	2.3e-33	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0028445_31	phrog_424	126.0	2.8e-37	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0028445_31	UniRef90_A0A1Y4LU27	375.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-0028445_31	1408437.JNJN01000032_gene2312	333.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0028445_31	BrxP_00001	80.6	5.1e-24	BrxP	BREX
Pfam	UHGV-0028445_31	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0028445_31	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0028445_31	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-0028445_32	K01160	61.9	1.9e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0028445_32	phrog_34	60.8	2.8e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028445_32	UniRef90_A0A844DBG8	229.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0028445_32	875454.BAEW01000002_gene491	133.0	1.36e-38	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0028445_32	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0028445_32	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0028445_32	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0028445_33	K05925	77.0	2.5e-22	METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]	N/A
PHROG	UHGV-0028445_33	phrog_359	230.7	0	DNA methyltransferase	other
UniRef90	UHGV-0028445_33	UniRef90_A0A329TJ90	292.0	0	DNA methyltransferase	N/A
eggNOG-mapper	UHGV-0028445_33	1235792.C808_02259	211.0	0	MT-A70	N/A
PADLOC	UHGV-0028445_33	MTase_II_00048	219.4	0	Type II methyltransferase	RM
Pfam	UHGV-0028445_33	PF05063	N/A	N/A	MT-A70	MT-A70
COG	UHGV-0028445_33	COG4725	N/A	N/A	N6-adenosine-specific RNA methylase IME4	N/A
structural_annotation	UHGV-0028445_33	PF05063,MF_01872,NF010253,COG4725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028445_34	PF14354	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_35	phrog_36	52.1	0.000000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0028445_35	UniRef90_A0A6N7TNN9	58.2	0.000000138	N/A	N/A
structural_annotation	UHGV-0028445_35	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_37	phrog_620	144.7	5.00264e-43	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028445_37	UniRef90_E2ZNR4	349.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0028445_37	748224.HMPREF9436_03344	349.0	0	ParB-like nuclease domain	N/A
PADLOC	UHGV-0028445_37	MTase_II_00015	54.1	0.0000000000000034	Type II methyltransferase	RM
Pfam	UHGV-0028445_37	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0028445_37	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
PHROG	UHGV-0028445_38	phrog_13321	42.1	0.0000000000075	N/A	unknown function
UniRef90	UHGV-0028445_38	UniRef90_E2ZNR3	655.0	0	Radical SAM domain protein	N/A
eggNOG-mapper	UHGV-0028445_38	748224.HMPREF9436_03343	655.0	0	DNA photolyase activity	N/A
COG	UHGV-0028445_38	COG1533	N/A	N/A	DNA repair photolyase	N/A
structural_annotation	UHGV-0028445_38	PF20903,MF_00660,NF033668,COG1180	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_39	phrog_309	44.7	0.0000000000022	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-0028445_39	748224.HMPREF9436_03342	122.0	4.12e-34	transposase activity	N/A
COG	UHGV-0028445_39	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
KOfam	UHGV-0028445_40	K06909	142.8	3.20057e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0028445_40	phrog_10250	173.0	0	N/A	unknown function
UniRef90	UHGV-0028445_40	UniRef90_A0A844D8I4	846.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0028445_40	411490.ANACAC_00783	494.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0028445_40	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0028445_40	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0028445_40	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0028445_40	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0028445_40	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_41	phrog_64	117.1	6.9e-35	portal protein	head and packaging
UniRef90	UHGV-0028445_41	UniRef90_A0A6N7TNT3	865.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0028445_41	1042156.CXIVA_01850	86.3	0.00000000000000332	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0028445_41	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0028445_41	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_43	phrog_2468	79.5	2.5e-23	head morphogenesis	head and packaging
UniRef90	UHGV-0028445_43	UniRef90_A0A844DBI4	591.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0028445_43	1504822.CCNO01000013_gene286	128.0	6.44e-30	cell adhesion	N/A
Pfam	UHGV-0028445_43	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0028445_43	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028445_43	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_44	phrog_5	50.6	0.000000000000048	tail completion or Neck1 protein	connector
UniRef90	UHGV-0028445_44	UniRef90_A0A844DDB3	284.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0028445_44	929506.CbC4_1219	85.9	2.75e-19	N/A	N/A
Pfam	UHGV-0028445_44	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0028445_44	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_45	phrog_478	123.8	7.5e-37	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0028445_45	UniRef90_A0A373Q857	164.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0028445_45	1111121.HMPREF1247_0834	95.9	1.12e-23	N/A	N/A
structural_annotation	UHGV-0028445_46	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_47	phrog_544	111.0	1.1e-32	major head protein	head and packaging
UniRef90	UHGV-0028445_47	UniRef90_A0A1C6B5R0	317.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0028445_47	476272.RUMHYD_01776	280.0	0	N/A	N/A
structural_annotation	UHGV-0028445_47	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_49	phrog_17977	48.1	0.00000000000018	N/A	unknown function
UniRef90	UHGV-0028445_49	UniRef90_A0A844DHJ8	236.0	0	Phage head closure protein	N/A
structural_annotation	UHGV-0028445_49	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028445_50	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_51	phrog_885	57.8	1.5e-16	major tail protein	tail
UniRef90	UHGV-0028445_51	UniRef90_A0A843J9F0	119.0	1.26e-29	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0028445_51	457396.CSBG_01054	56.6	0.00000046	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
COG	UHGV-0028445_51	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-0028445_51	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_53	phrog_28775	133.6	1.90001e-40	tail length tape measure protein	tail
UniRef90	UHGV-0028445_53	UniRef90_A0A844DDD5	1001.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0028445_53	1492737.FEM08_12070	142.0	1.02e-32	tape measure	N/A
Pfam	UHGV-0028445_53	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0028445_53	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0028445_53	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0028445_53	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0028445_54	UniRef90_R6QN45	87.0	5.28e-17	Putative phage tail component domain protein	N/A
eggNOG-mapper	UHGV-0028445_54	411490.ANACAC_00709	79.3	0.00000000000000641	phage tail	N/A
COG	UHGV-0028445_54	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0028445_54	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_55	phrog_3558	204.0	0	tail protein	tail
UniRef90	UHGV-0028445_55	UniRef90_UPI001C01D15B	149.0	1.43e-34	phage tail protein	N/A
eggNOG-mapper	UHGV-0028445_55	1235799.C818_04233	99.4	2.59e-19	Prophage endopeptidase tail	N/A
Pfam	UHGV-0028445_55	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0028445_55	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0028445_55	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
KOfam	UHGV-0028445_57	K07273	170.1	0	acm; lysozyme	N/A
PHROG	UHGV-0028445_57	phrog_291	135.4	5e-40	endolysin	lysis
UniRef90	UHGV-0028445_57	UniRef90_UPI001D0EE7D8	260.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0028445_57	748224.HMPREF9436_00154	243.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0028445_57	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0028445_57	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0028445_57	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0028445_59	phrog_15303	113.7	9.1e-34	N/A	unknown function
PHROG	UHGV-0028445_60	phrog_1454	50.8	0.000000000000026	N/A	unknown function
UniRef90	UHGV-0028445_60	UniRef90_A0A0D1WCB4	48.9	0.00000355	Phosphomannomutase	N/A
eggNOG-mapper	UHGV-0028445_60	742740.HMPREF9474_04325	56.6	0.000000000543	N/A	N/A
structural_annotation	UHGV-0028445_62	PF07374,MF_00245,NF001072,COG2739	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0028445	Yes	39,207	53	93	1
UHGV-0030634	No	39,503	53	94	1