Viral OTU vOTU-088359

vOTU: vOTU-088359

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-088359
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00040 → vGENUS-00013 → vOTU-088359
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1527042
Biosample ID	SAMEA3664834
Length	40,942 bps
CheckV Completeness	71.10% (Medium-quality)
CDS Count	62
CDS Density	84.27%
tRNA Count	5
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 71.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1527042_1	UniRef90_UPI001A4BEEB2	103.0	5.49e-28	cytochrome C	N/A
eggNOG-mapper	UHGV-1527042_1	1200567.JNKD01000039_gene220	71.2	6.38e-16	N/A	N/A
eggNOG-mapper	UHGV-1527042_2	411490.ANACAC_00713	641.0	0	N/A	N/A
KOfam	UHGV-1527042_4	K03427	127.6	1.3e-37	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-1527042_4	phrog_2713	90.3	2.2e-26	N/A	unknown function
UniRef90	UHGV-1527042_4	UniRef90_UPI001CA547F2	205.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-1527042_4	478749.BRYFOR_09855	278.0	0	type I restriction-modification system	N/A
PADLOC	UHGV-1527042_4	MTase_I_00004	187.8	0	Type I methyltransferase	RM
Pfam	UHGV-1527042_4	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-1527042_4	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
KOfam	UHGV-1527042_5	K03427	57.8	1.7e-16	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-1527042_5	phrog_2713	58.3	1.2e-16	N/A	unknown function
UniRef90	UHGV-1527042_5	UniRef90_UPI00189C115F	184.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-1527042_5	877420.ATVW01000011_gene840	208.0	0	N-6 DNA Methylase	N/A
PADLOC	UHGV-1527042_5	MTase_I_00004	160.2	0	Type I methyltransferase	RM
Pfam	UHGV-1527042_5	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-1527042_5	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
UniRef90	UHGV-1527042_6	UniRef90_U2EV75	161.0	0	Type I restriction modification DNA specificity domain protein (Fragment)	N/A
eggNOG-mapper	UHGV-1527042_6	1384049.CD29_03855	130.0	3.19e-35	Type I restriction modification DNA specificity domain	N/A
Pfam	UHGV-1527042_6	PF01420	N/A	N/A	Type I restriction modification DNA specificity domain	Methylase_S
COG	UHGV-1527042_6	COG0732	N/A	N/A	Restriction endonuclease S subunit	N/A
KOfam	UHGV-1527042_7	K01154	79.2	5.5e-23	hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]	N/A
UniRef90	UHGV-1527042_7	UniRef90_A0A3R6TPS7	392.0	0	Restriction endonuclease subunit S	N/A
eggNOG-mapper	UHGV-1527042_7	665950.HMPREF1025_02788	362.0	0	Type I restriction modification DNA specificity domain	N/A
PADLOC	UHGV-1527042_7	Specificity_I_00082	151.0	2.8026e-45	Type I specificity subunit	RM
Pfam	UHGV-1527042_7	PF01420	N/A	N/A	Type I restriction modification DNA specificity domain	Methylase_S
COG	UHGV-1527042_7	COG0732	N/A	N/A	Restriction endonuclease S subunit	N/A
KOfam	UHGV-1527042_8	K07075	53.2	0.000000000000007	N/A	N/A
UniRef90	UHGV-1527042_8	UniRef90_UPI0018A00B1C	184.0	0	nucleotidyltransferase domain-containing protein	N/A
eggNOG-mapper	UHGV-1527042_8	411468.CLOSCI_03170	116.0	4.51e-29	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family	N/A
Pfam	UHGV-1527042_8	PF18765	N/A	N/A	Polymerase beta, Nucleotidyltransferase	Polbeta
COG	UHGV-1527042_8	COG2265	N/A	N/A	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	N/A
structural_annotation	UHGV-1527042_8	PF18765,NF010309,COG1669	N/A	N/A	N/A	N/A
UniRef90	UHGV-1527042_9	UniRef90_UPI00189FAD95	263.0	0	HI0074 family nucleotidyltransferase substrate-binding subunit	N/A
eggNOG-mapper	UHGV-1527042_9	1121115.AXVN01000038_gene3316	197.0	0	Nucleotidyltransferase substrate binding protein like	N/A
Pfam	UHGV-1527042_9	PF08780	N/A	N/A	Nucleotidyltransferase substrate binding protein like	NTase_sub_bind
NCBIFam	UHGV-1527042_9	TIGR01987.1	N/A	N/A	HI0074 family nucleotidyltransferase substrate-binding subunit	N/A
COG	UHGV-1527042_9	COG1669	N/A	N/A	Predicted nucleotidyltransferase MJ0435	N/A
structural_annotation	UHGV-1527042_9	PF08780,TIGR01987,COG2445	N/A	N/A	N/A	N/A
KOfam	UHGV-1527042_10	K03733	42.9	0.0000000000079	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-1527042_10	phrog_1	53.9	0.0000000000000033	integrase	integration and excision
UniRef90	UHGV-1527042_10	UniRef90_UPI001C8BD2E0	202.0	0	phage integrase N-terminal SAM-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1527042_10	658088.HMPREF0987_01033	216.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1527042_10	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
COG	UHGV-1527042_10	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1527042_10	PF13495,MF_01808,NF001399,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1527042_11	K01142	365.7	0	E3.1.11.2, xthA; exodeoxyribonuclease III [EC:3.1.11.2]	N/A
PHROG	UHGV-1527042_11	phrog_19169	218.0	0	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1527042_11	UniRef90_A0A173UE92	508.0	0	Exodeoxyribonuclease III	N/A
eggNOG-mapper	UHGV-1527042_11	622312.ROSEINA2194_01924	438.0	0	exodeoxyribonuclease III	N/A
Pfam	UHGV-1527042_11	PF03372	N/A	N/A	Endonuclease/Exonuclease/phosphatase family	Exo_endo_phos
NCBIFam	UHGV-1527042_11	TIGR00633.1	N/A	N/A	exodeoxyribonuclease III	N/A
COG	UHGV-1527042_11	COG0708	N/A	N/A	Exonuclease III	N/A
structural_annotation	UHGV-1527042_11	PF03372,MF_01119,NF010489,COG0708	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1527042_13	658655.HMPREF0988_00919	91.7	3.65e-21	N/A	N/A
eggNOG-mapper	UHGV-1527042_14	658655.HMPREF0988_00918	92.0	1.12e-23	N/A	N/A
PHROG	UHGV-1527042_15	phrog_16490	197.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1527042_15	397290.C810_01328	190.0	0	N/A	N/A
PHROG	UHGV-1527042_16	phrog_20016	211.1	0	N/A	unknown function
UniRef90	UHGV-1527042_16	UniRef90_A0A285PT46	159.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1527042_16	397290.C810_05214	208.0	0	N/A	N/A
structural_annotation	UHGV-1527042_16	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-1527042_17	UniRef90_UPI001F10428A	47.0	0.00000757	N/A	N/A
Pfam	UHGV-1527042_17	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-1527042_17	PF19891,NF041793,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-1527042_18	phrog_374	213.8	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1527042_18	UniRef90_A0A0H3N242	191.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1527042_18	673376.F2VHW3_9CAUD	184.0	0	sequence-specific DNA binding transcription factor activity	N/A
eggNOG-mapper	UHGV-1527042_19	658655.HMPREF0988_00915	118.0	6.96e-30	N/A	N/A
eggNOG-mapper	UHGV-1527042_20	658655.HMPREF0988_00914	71.2	0.00000000000000387	N/A	N/A
structural_annotation	UHGV-1527042_20	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-1527042_25	phrog_11100	97.3	9.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-1527042_25	1283077.M1ICI7_9CAUD	50.1	0.0000042	N/A	N/A
PHROG	UHGV-1527042_26	phrog_31631	44.1	0.0000000000026	N/A	unknown function
eggNOG-mapper	UHGV-1527042_28	658655.HMPREF0988_00895	69.7	0.00000000000219	N/A	N/A
PHROG	UHGV-1527042_29	phrog_229	116.6	1.2e-34	MazG-like pyrophosphatase	other
UniRef90	UHGV-1527042_29	UniRef90_R6C0D1	244.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-1527042_29	428125.CLOLEP_01391	105.0	2.07e-27	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-1527042_29	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1527042_29	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1527042_29	PF03819,MF_01020,NF001613,COG0140	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1527042_30	411473.RUMCAL_02525	100.0	4.33e-26	N/A	N/A
UniRef90	UHGV-1527042_33	UniRef90_A0A8D9PGN8	106.0	1.32e-28	Acetyl-coA carboxylase zinc finger domain protein	N/A
PHROG	UHGV-1527042_39	phrog_38	145.9	2.70451e-43	terminase large subunit	head and packaging
UniRef90	UHGV-1527042_39	UniRef90_A0A8D9UIV2	1015.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1527042_39	397290.C810_01390	699.0	0	chromosome segregation	N/A
Pfam	UHGV-1527042_39	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
COG	UHGV-1527042_39	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1527042_39	PF17289,PF05876,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1527042_40	phrog_36	69.5	5.8e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1527042_40	UniRef90_A0A352SH29	105.0	4.22e-27	RNA polymerase subunit sigma-70 (Fragment)	N/A
eggNOG-mapper	UHGV-1527042_40	97138.C820_00772	78.2	1.68e-16	sigma factor activity	N/A
COG	UHGV-1527042_40	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1527042_40	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
UniRef90	UHGV-1527042_41	UniRef90_A0A8D9UIR9	146.0	8.40779e-45	RimK-related lysine biosynthesis protein	N/A
PHROG	UHGV-1527042_42	phrog_64	138.9	2.59997e-41	portal protein	head and packaging
UniRef90	UHGV-1527042_42	UniRef90_A0A8D9PG58	1008.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1527042_42	397290.C810_01397	459.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1527042_42	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1527042_42	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1527042_44	phrog_544	277.3	0	major head protein	head and packaging
UniRef90	UHGV-1527042_44	UniRef90_A0A8D9PGL1	635.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1527042_44	608534.GCWU000341_02293	331.0	0	N/A	N/A
NCBIFam	UHGV-1527042_44	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1527042_44	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1527042_45	UniRef90_A0A8D9UIY7	166.0	0	Rho termination factor	N/A
structural_annotation	UHGV-1527042_45	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1527042_46	397290.C810_01402	73.6	0.00000000000000312	N/A	N/A
PHROG	UHGV-1527042_47	phrog_4105	85.2	5.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1527042_47	411459.RUMOBE_00911	159.0	0	N/A	N/A
PHROG	UHGV-1527042_48	phrog_443	54.8	0.0000000000000027	holin	lysis
UniRef90	UHGV-1527042_48	UniRef90_UPI000BA3B743	98.6	9.63e-26	holin	N/A
eggNOG-mapper	UHGV-1527042_48	411490.ANACAC_00704	87.8	2.78e-22	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1527042_48	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1527042_48	PF16945	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1527042_49	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1527042_50	1298920.KI911353_gene2654	173.0	0	N/A	N/A
AcrCatalog	UHGV-1527042_50	cluster_24841	89.7	1.51e-24	NA	N/A
structural_annotation	UHGV-1527042_51	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-1527042_52	UniRef90_A0A8D9PGN2	184.0	0	Major tail protein	N/A
structural_annotation	UHGV-1527042_52	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1527042_55	phrog_14030	127.3	9.9e-38	N/A	unknown function
UniRef90	UHGV-1527042_55	UniRef90_A0A3R6ARM6	199.0	0	Peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-1527042_55	1235793.C809_02691	171.0	0	N-Acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-1527042_55	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
PHROG	UHGV-1527042_56	phrog_1535	286.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1527042_56	UniRef90_A0A173UHS1	1026.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1527042_56	1232443.BAIA02000078_gene18	220.0	0	phage tail tape measure protein	N/A
COG	UHGV-1527042_56	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1527042_56	PF20155,MF_04138	N/A	N/A	N/A	N/A
UniRef90	UHGV-1527042_57	UniRef90_A0A173UG14	573.0	0	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1527042_57	1410624.JNKK01000088_gene2110	69.3	0.0000000000827	Bacterial Ig-like domain (group 2)	N/A
structural_annotation	UHGV-1527042_57	PF02368,PF07233,NF038353,NF005261	N/A	N/A	N/A	N/A
PHROG	UHGV-1527042_58	phrog_130	148.3	5.04467e-44	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1527042_58	UniRef90_UPI0009D7969F	234.0	0	transporter	N/A
eggNOG-mapper	UHGV-1527042_58	1443125.Z962_p0009	205.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1527042_58	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-1527042_58	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1527042_58	PF02498,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1527042_59	phrog_1194	46.2	0.00000000000064	N/A	unknown function
Pfam	UHGV-1527042_59	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1527042_59	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1527042_60	phrog_18190	473.0	0	N/A	unknown function
UniRef90	UHGV-1527042_60	UniRef90_A0A173UFM3	1290.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1527042_60	397290.C810_05239	284.0	0	N/A	N/A
Pfam	UHGV-1527042_60	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1527042_60	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1527042_61	phrog_17196	133.8	2.89999e-41	kinase	other
eggNOG-mapper	UHGV-1527042_61	483218.BACPEC_01141	179.0	0	N/A	N/A
structural_annotation	UHGV-1527042_61	PF19537,PF13619,COG3536	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1527042_62	742733.HMPREF9469_01801	54.7	0.0000025	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1527042	Yes	40,942	40	71	1