Viral OTU vOTU-089412

vOTU: vOTU-089412

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-089412
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-05885 → vGENUS-13760 → vOTU-089412
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminococcus → Ruminococcus sp900540005
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0011452
Biosample ID	N/A
Length	25,304 bps
CheckV Completeness	69.47% (Medium-quality)
CDS Count	39
CDS Density	91.16%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 69.47)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0011452_2	K11044	49.1	0.000000000000017	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	N/A
PHROG	UHGV-0011452_2	phrog_7104	79.1	3.2e-23	N/A	unknown function
UniRef90	UHGV-0011452_2	UniRef90_A0A3A4S450	87.0	0.00000000000000782	Ntox50 domain-containing protein	N/A
eggNOG-mapper	UHGV-0011452_2	697329.Rumal_1691	97.4	1.49e-19	N/A	N/A
Pfam	UHGV-0011452_2	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
PHROG	UHGV-0011452_3	phrog_104	263.8	0	portal protein	head and packaging
UniRef90	UHGV-0011452_3	UniRef90_A0A373V3S0	497.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0011452_3	665950.HMPREF1025_02537	445.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-0011452_3	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0011452_4	phrog_36	40.3	0.000000000031	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0011452_4	PF16535,PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-0011452_12	K06919	105.6	4.7e-31	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-0011452_12	phrog_1829	820.9	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0011452_12	UniRef90_A0A348ZC79	912.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0011452_12	1410670.JHXF01000015_gene2274	882.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0011452_12	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0011452_12	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0011452_12	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0011452_12	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0011452_12	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0011452_12	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-0011452_13	phrog_378	124.0	1.3e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0011452_13	UniRef90_UPI0006852132	226.0	0	N/A	N/A
eggNOG-mapper	UHGV-0011452_13	1410670.JHXF01000015_gene2272	226.0	0	N/A	N/A
Pfam	UHGV-0011452_13	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-0011452_13	PF05037,NF004948	N/A	N/A	N/A	N/A
PHROG	UHGV-0011452_14	phrog_5702	79.6	1.5e-23	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0011452_14	UniRef90_UPI000A4B1865	166.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0011452_14	1410670.JHXF01000015_gene2271	166.0	0	VRR_NUC	N/A
Pfam	UHGV-0011452_14	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0011452_14	PF01870,MF_00130,NF002581,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0011452_15	K19789	317.2	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-0011452_15	phrog_16	272.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0011452_15	UniRef90_A0A356CZA9	579.0	0	Helicase	N/A
eggNOG-mapper	UHGV-0011452_15	1410670.JHXF01000015_gene2270	557.0	0	helicase	N/A
PADLOC	UHGV-0011452_15	mREase_IV_00005	114.3	7.3e-35	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0011452_15	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0011452_15	PF18766	N/A	N/A	SWI2/SNF2 ATPase	SWI2_SNF2
Pfam	UHGV-0011452_15	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0011452_15	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0011452_15	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0011452_16	phrog_2872	254.1	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0011452_16	UniRef90_UPI001A9B3ECC	363.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0011452_16	754027.HMPREF9554_00709	217.0	0	N/A	N/A
Pfam	UHGV-0011452_16	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0011452_16	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0011452_17	phrog_253	110.7	2.5e-33	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0011452_17	UniRef90_UPI0019171ADA	160.0	0	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0011452_17	632292.Calhy_0748	66.2	0.0000000000427	Siphovirus Gp157	N/A
Pfam	UHGV-0011452_17	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0011452_17	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0011452_18	phrog_15609	79.0	3.4e-23	N/A	unknown function
UniRef90	UHGV-0011452_18	UniRef90_A0A373VML2	211.0	0	N/A	N/A
eggNOG-mapper	UHGV-0011452_18	641112.ACOK01000073_gene2872	183.0	0	N/A	N/A
structural_annotation	UHGV-0011452_18	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0011452_19	phrog_22801	47.0	0.00000000000027	N/A	unknown function
PHROG	UHGV-0011452_21	phrog_8470	232.9	0	N/A	unknown function
UniRef90	UHGV-0011452_21	UniRef90_UPI0019175B9C	321.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0011452_21	641112.ACOK01000073_gene2870	431.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0011452_21	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0011452_21	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0011452_22	phrog_38338	57.0	3.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-0011452_22	641112.ACOK01000073_gene2869	94.0	2.38e-23	N/A	N/A
structural_annotation	UHGV-0011452_25	PF10743	N/A	N/A	N/A	N/A
UniRef90	UHGV-0011452_26	UniRef90_E6MH06	64.7	0.00000000000375	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0011452_26	887929.HMP0721_1290	64.7	0.000000000000629	Helix-turn-helix domain of resolvase	N/A
Pfam	UHGV-0011452_26	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-0011452_26	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0011452_27	K01356	134.5	1.1e-39	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0011452_27	phrog_4	146.9	1.49939e-43	transcriptional repressor	transcription regulation
UniRef90	UHGV-0011452_27	UniRef90_A0A7X5KSC2	189.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0011452_27	641112.ACOK01000103_gene520	239.0	0	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0011452_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0011452_27	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0011452_27	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0011452_27	PF00717,PF12844,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
PHROG	UHGV-0011452_28	phrog_1847	348.0	0	N/A	unknown function
UniRef90	UHGV-0011452_28	UniRef90_D1PLA1	338.0	0	T5orf172 domain-containing protein	N/A
eggNOG-mapper	UHGV-0011452_28	411471.SUBVAR_05139	338.0	0	T5orf172	N/A
Pfam	UHGV-0011452_28	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-0011452_28	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0011452_28	PF19962	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0011452_29	1410670.JHXF01000019_gene65	238.0	0	N/A	N/A
KOfam	UHGV-0011452_30	K14059	257.6	0	int; integrase	N/A
PHROG	UHGV-0011452_30	phrog_1	243.4	0	integrase	integration and excision
UniRef90	UHGV-0011452_30	UniRef90_A0A1C6EL66	439.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0011452_30	1203606.HMPREF1526_02099	271.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0011452_30	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0011452_30	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0011452_30	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0011452_30	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0011452_31	UniRef90_UPI00189D6BF2	87.4	1.62e-20	N/A	N/A
eggNOG-mapper	UHGV-0011452_31	457396.CSBG_00698	99.0	6.51e-26	N/A	N/A
Pfam	UHGV-0011452_31	PF06124	N/A	N/A	N/A	DUF960
COG	UHGV-0011452_31	COG0827	N/A	N/A	Adenine-specific DNA N6-methylase	N/A
structural_annotation	UHGV-0011452_31	PF06124	N/A	N/A	N/A	N/A
UniRef90	UHGV-0011452_33	UniRef90_A0A374GLG7	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-0011452_33	1511.CLOST_2527	79.3	4.21e-16	N/A	N/A
Pfam	UHGV-0011452_33	PF07799	N/A	N/A	N/A	DUF1643
COG	UHGV-0011452_33	COG4333	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0011452_33	PF07799,COG4333	N/A	N/A	N/A	N/A
Pfam	UHGV-0011452_34	PF06048	N/A	N/A	N/A	DUF927
KOfam	UHGV-0011452_35	K14059	259.0	0	int; integrase	N/A
PHROG	UHGV-0011452_35	phrog_1	204.5	0	integrase	integration and excision
UniRef90	UHGV-0011452_35	UniRef90_R7MLN3	381.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0011452_35	697281.Mahau_0104	198.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0011452_35	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0011452_35	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0011452_35	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0011452_35	PF00589,PF02899,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0011452_37	K22299	63.0	7.1e-18	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0011452_37	phrog_8	74.2	2.6e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0011452_37	UniRef90_R7MTC6	170.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0011452_37	1235802.C823_03240	111.0	1.36e-30	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0011452_37	retron_type_VI_hth_cluster2_1	49.3	0.00000000000014	N/A	Retron
Pfam	UHGV-0011452_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0011452_37	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0011452_37	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0011452	Yes	25,304	43	69	1
UHGV-0013244	No	25,304	43	69	1
UHGV-0014547	No	25,304	43	69	1