Viral OTU vOTU-091317

vOTU: vOTU-091317

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-091317
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00261 → vGENUS-00170 → vOTU-091317
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0191113
Biosample ID	SAMEA2737831
Length	23,565 bps
CheckV Completeness	67.64% (Medium-quality)
CDS Count	36
CDS Density	89.75%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 67.64)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0191113_1	UniRef90_UPI0019568B57	106.0	4.52e-29	ribbon-helix-helix protein, CopG family	N/A
eggNOG-mapper	UHGV-0191113_1	877411.JMMA01000002_gene1754	70.9	0.00000000000000123	Ribbon-helix-helix protein, copG family	N/A
Pfam	UHGV-0191113_1	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
KOfam	UHGV-0191113_2	K02510	258.6	0	hpaI, hpcH; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]	N/A
UniRef90	UHGV-0191113_2	UniRef90_R5B8D9	499.0	0	HpcH_HpaI domain-containing protein	N/A
eggNOG-mapper	UHGV-0191113_2	1121324.CLIT_10c01820	243.0	0	Belongs to the HpcH HpaI aldolase family	N/A
Pfam	UHGV-0191113_2	PF03328	N/A	N/A	HpcH/HpaI aldolase/citrate lyase family	HpcH_HpaI
COG	UHGV-0191113_2	COG3836	N/A	N/A	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	N/A
KOfam	UHGV-0191113_3	K07504	441.3	0	K07504; predicted type IV restriction endonuclease	N/A
PHROG	UHGV-0191113_3	phrog_4225	460.4	0	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0191113_3	UniRef90_R5AWG7	687.0	0	Putative endonuclease	N/A
eggNOG-mapper	UHGV-0191113_3	742738.HMPREF9460_04035	545.0	0	Type I restriction enzyme R protein N terminus (HSDR_N)	N/A
Pfam	UHGV-0191113_3	PF04313	N/A	N/A	Type I restriction enzyme R protein N terminus (HSDR_N)	HSDR_N
COG	UHGV-0191113_3	COG4748	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191113_3	PF13588,TIGR04256,COG4748	N/A	N/A	N/A	N/A
KOfam	UHGV-0191113_4	K14059	220.3	0	int; integrase	N/A
PHROG	UHGV-0191113_4	phrog_1	195.6	0	integrase	integration and excision
UniRef90	UHGV-0191113_4	UniRef90_UPI001958A27A	208.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0191113_4	1203606.HMPREF1526_00215	163.0	3.50325e-44	Phage integrase family	N/A
Pfam	UHGV-0191113_4	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0191113_4	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0191113_4	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0191113_4	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0191113_5	phrog_5783	291.6	0	N/A	unknown function
UniRef90	UHGV-0191113_5	UniRef90_A0A1C7FL48	314.0	0	Nuclease	N/A
eggNOG-mapper	UHGV-0191113_5	445971.ANASTE_00686	266.0	0	NYN domain	N/A
Pfam	UHGV-0191113_5	PF01936	N/A	N/A	NYN domain	NYN
COG	UHGV-0191113_5	COG1432	N/A	N/A	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	N/A
structural_annotation	UHGV-0191113_5	PF01936,TIGR00288,COG1432	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191113_6	PF21227	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191113_7	PF18768,MF_02066,NF011886,COG5010	N/A	N/A	N/A	N/A
PHROG	UHGV-0191113_8	phrog_1914	100.0	9.3e-30	N/A	unknown function
UniRef90	UHGV-0191113_8	UniRef90_R6DVV5	238.0	0	Predicted Zn peptidase	N/A
eggNOG-mapper	UHGV-0191113_8	1160721.RBI_I01604	144.0	6.61006e-41	N/A	N/A
Pfam	UHGV-0191113_8	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0191113_8	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0191113_8	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0191113_9	K22300	60.8	2.9e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0191113_9	phrog_8	50.4	0.000000000000046	transcriptional regulator	transcription regulation
UniRef90	UHGV-0191113_9	UniRef90_UPI000E31F980	89.7	9.38e-21	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0191113_9	1125712.HMPREF1316_2394	63.2	0.000000000202	Peptidase S24-like	N/A
PADLOC	UHGV-0191113_9	retron_type_VI_hth_cluster2_1	40.4	0.000000000065	N/A	Retron
Pfam	UHGV-0191113_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0191113_9	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0191113_9	PF13560,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0191113_10	K07729	40.8	0.000000000044	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-0191113_10	UniRef90_UPI0013ECC13D	63.5	0.00000000000758	helix-turn-helix domain-containing protein	N/A
PADLOC	UHGV-0191113_10	retron_type_VI_hth_cluster2_1	41.1	0.00000000005	N/A	Retron
Pfam	UHGV-0191113_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0191113_10	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0191113_10	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0191113_15	K06284	109.8	1.8e-32	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-0191113_15	phrog_4681	97.2	6.6e-29	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0191113_15	UniRef90_A0A098MBW8	102.0	1.07e-26	AbrB family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0191113_15	268407.PWYN_12320	102.0	1.8e-27	AbrB family transcriptional regulator	N/A
Pfam	UHGV-0191113_15	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
NCBIFam	UHGV-0191113_15	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-0191113_15	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-0191113_15	PF04014,TIGR01439,COG2002	N/A	N/A	N/A	N/A
PHROG	UHGV-0191113_18	phrog_3584	130.5	1.2e-38	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0191113_18	411470.RUMGNA_02047	136.0	1.13e-35	N/A	N/A
structural_annotation	UHGV-0191113_18	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0191113_19	K03700	92.8	4.4e-27	recU; recombination protein U	N/A
PHROG	UHGV-0191113_19	phrog_843	140.3	6.30024e-42	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0191113_19	UniRef90_A0A1H0W5Y9	167.0	0	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-0191113_19	1203606.HMPREF1526_01884	156.0	5.60519e-45	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
Pfam	UHGV-0191113_19	PF03838	N/A	N/A	Recombination protein U	RecU
COG	UHGV-0191113_19	COG3331	N/A	N/A	Penicillin-binding protein-related factor A, putative recombinase	N/A
structural_annotation	UHGV-0191113_19	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
KOfam	UHGV-0191113_20	K00558	224.6	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0191113_20	phrog_116	255.8	0	DNA methyltransferase	other
UniRef90	UHGV-0191113_20	UniRef90_A0A350THX9	795.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0191113_20	1121334.KB911073_gene1852	662.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0191113_20	MTase_II_00020	94.2	5.5e-30	Type II methyltransferase	RM
Pfam	UHGV-0191113_20	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0191113_20	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0191113_20	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0191113_21	K06223	229.1	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0191113_21	phrog_56	174.3	0	DNA methyltransferase	other
UniRef90	UHGV-0191113_21	UniRef90_R9MCP5	305.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-0191113_21	1235799.C818_02654	305.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0191113_21	MTase_II_00030	274.9	0	Type II methyltransferase	RM
Pfam	UHGV-0191113_21	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-0191113_21	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-0191113_21	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0191113_22	phrog_5781	69.3	5.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-0191113_22	573061.Clocel_3558	77.0	6.15e-16	N/A	N/A
Pfam	UHGV-0191113_22	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0191113_22	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0191113_22	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0191113_23	phrog_3136	117.2	3.4e-35	N/A	unknown function
UniRef90	UHGV-0191113_23	UniRef90_UPI001C26B029	125.0	1.99e-32	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0191113_23	97139.C824_00742	58.5	0.0000000238	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0191113_23	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0191113_23	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0191113_24	phrog_36	67.2	2.9e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0191113_24	UniRef90_A0A7D6VSS6	64.3	0.000000000279	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0191113_24	1294142.CINTURNW_1020	62.4	0.000000000255	N/A	N/A
Pfam	UHGV-0191113_24	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0191113_24	PF07374,TIGR01636	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191113_25	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-0191113_26	K06909	395.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0191113_26	phrog_5653	146.5	1.59748e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0191113_26	UniRef90_A0A416S378	637.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0191113_26	33035.JPJF01000106_gene3136	599.0	0	Terminase small subunit	N/A
Pfam	UHGV-0191113_26	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-0191113_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0191113_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0191113_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0191113_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0191113_26	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0191113_27	phrog_1233	95.2	7.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0191113_27	1415774.U728_832	93.2	3.72e-23	N/A	N/A
structural_annotation	UHGV-0191113_27	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-0191113_28	phrog_533	204.3	0	portal protein	head and packaging
UniRef90	UHGV-0191113_28	UniRef90_A0A1C6CDM8	340.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0191113_28	33035.JPJF01000106_gene3135	327.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0191113_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0191113_29	phrog_581	243.5	0	minor head protein	head and packaging
UniRef90	UHGV-0191113_29	UniRef90_A0A3D4T830	351.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0191113_29	476272.RUMHYD_01761	226.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0191113_29	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0191113_29	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191113_29	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0191113_30	phrog_15041	48.0	0.00000000000017	N/A	unknown function
PHROG	UHGV-0191113_31	phrog_194	43.9	0.0000000000041	head scaffolding protein	head and packaging
UniRef90	UHGV-0191113_31	UniRef90_UPI001C0EBA51	129.0	6.04e-34	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0191113_31	1125725.HMPREF1325_1331	61.6	0.00000000317	Phage minor structural protein GP20	N/A
Pfam	UHGV-0191113_31	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0191113_31	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0191113_32	phrog_267	54.8	0.0000000000000013	major head protein	head and packaging
eggNOG-mapper	UHGV-0191113_32	1235799.C818_04223	158.0	8.40779e-44	N/A	N/A
structural_annotation	UHGV-0191113_32	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0191113_33	phrog_541	70.2	2.7e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0191113_33	476272.RUMHYD_01778	73.9	0.0000000000000156	N/A	N/A
PHROG	UHGV-0191113_34	phrog_3366	48.6	0.00000000000015	N/A	unknown function
structural_annotation	UHGV-0191113_34	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0191113_35	phrog_556	65.9	1.1e-19	minor head protein	head and packaging
UniRef90	UHGV-0191113_35	UniRef90_A0A1H7MNM8	117.0	1.14e-30	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0191113_35	476272.RUMHYD_01780	115.0	5.99e-31	N/A	N/A
Pfam	UHGV-0191113_35	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0191113_35	PF11114	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0191113	Yes	23,565	55	68	1