Viral OTU vOTU-096854

vOTU: vOTU-096854

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-096854
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00307 → vGENUS-06626 → vOTU-096854
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminiclostridium_E → Ruminiclostridium_E siraeum
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1437812
Biosample ID	SAMN02334080
Length	20,094 bps
CheckV Completeness	50.70% (Medium-quality)
CDS Count	27
CDS Density	94.77%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.7)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1437812_1	K14059	187.8	0	int; integrase	N/A
PHROG	UHGV-1437812_1	phrog_1	178.5	0	integrase	integration and excision
UniRef90	UHGV-1437812_1	UniRef90_UPI00164D34B0	144.0	2.1e-36	site-specific integrase	N/A
eggNOG-mapper	UHGV-1437812_1	290402.Cbei_2306	111.0	1.25e-24	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1437812_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1437812_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1437812_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1437812_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1437812_2	phrog_17596	42.5	0.0000000000042	N/A	unknown function
eggNOG-mapper	UHGV-1437812_2	931276.Cspa_c57370	63.5	0.0000000345	Phage Mu protein F like protein	N/A
COG	UHGV-1437812_2	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1437812_3	phrog_20936	45.2	0.0000000000017	N/A	unknown function
UniRef90	UHGV-1437812_3	UniRef90_A0A374E958	120.0	3.07e-34	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1437812_3	861450.HMPREF0080_02020	51.6	0.0000000989	N/A	N/A
structural_annotation	UHGV-1437812_3	PF06114	N/A	N/A	N/A	N/A
PHROG	UHGV-1437812_4	phrog_8	52.4	0.000000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-1437812_4	UniRef90_A0A373XY93	204.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1437812_4	1160721.RBI_I01471	64.3	0.000000000015	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1437812_4	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1437812_4	PF12844,MF_02017,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1437812_5	UniRef90_A0A373XXU1	100.0	2.44e-26	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1437812_5	428125.CLOLEP_02737	49.3	0.000000834	N/A	N/A
structural_annotation	UHGV-1437812_9	MF_01549,TIGR02228	N/A	N/A	N/A	N/A
KOfam	UHGV-1437812_10	K00558	198.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1437812_10	phrog_116	243.4	0	DNA methyltransferase	other
UniRef90	UHGV-1437812_10	UniRef90_A0A1V5S330	438.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1437812_10	573061.Clocel_3986	378.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1437812_10	oMTase_00004	291.1	0	orphan methyltransferase	RM
Pfam	UHGV-1437812_10	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1437812_10	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1437812_10	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1437812_10	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1437812_12	K14440	54.9	1.9e-24	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-1437812_12	phrog_16	192.9	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1437812_12	UniRef90_U2KY37	619.0	0	Helicase protein	N/A
eggNOG-mapper	UHGV-1437812_12	411473.RUMCAL_00274	619.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-1437812_12	PF00270	N/A	N/A	DEAD/DEAH box helicase	DEAD
Pfam	UHGV-1437812_12	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1437812_12	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1437812_12	PF18766,PF16203,MF_01821,TIGR04095,COG0553	N/A	N/A	N/A	N/A
KOfam	UHGV-1437812_13	K24451	125.4	4.2e-37	zim; modification methylase	N/A
PHROG	UHGV-1437812_13	phrog_67	108.1	4.9e-32	DNA methyltransferase	other
UniRef90	UHGV-1437812_13	UniRef90_A0A3R6Q0Y1	502.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1437812_13	411473.RUMCAL_00273	491.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1437812_13	MTase_II_00139	98.4	1.4e-28	Type II methyltransferase	RM
Pfam	UHGV-1437812_13	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1437812_13	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1437812_13	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1437812_14	phrog_21613	97.9	8.6e-29	N/A	unknown function
eggNOG-mapper	UHGV-1437812_14	1120998.AUFC01000030_gene2214	149.0	3.82554e-43	N/A	N/A
KOfam	UHGV-1437812_15	K03546	60.3	2.2e-17	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1437812_15	phrog_1499	275.3	0	N/A	unknown function
UniRef90	UHGV-1437812_15	UniRef90_A0A1C6FNE5	617.0	0	Chromosome segregation protein	N/A
eggNOG-mapper	UHGV-1437812_15	1120998.AUFC01000030_gene2215	588.0	0	DNA recombination	N/A
Pfam	UHGV-1437812_15	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1437812_15	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-1437812_15	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-1437812_16	phrog_1227	251.0	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1437812_16	UniRef90_A0A352DNR3	323.0	0	N/A	N/A
eggNOG-mapper	UHGV-1437812_16	1120998.AUFC01000030_gene2216	293.0	0	N/A	N/A
Pfam	UHGV-1437812_16	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-1437812_16	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1437812_16	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
KOfam	UHGV-1437812_17	K03111	135.5	5.9e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1437812_17	phrog_44	141.5	4.99983e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1437812_17	UniRef90_A0A174Z7R4	194.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1437812_17	445972.ANACOL_04434	137.0	1.26e-39	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1437812_17	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1437812_17	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1437812_17	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1437812_17	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1437812_17	PF00436,MF_00984,NF005242,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1437812_18	phrog_3490	108.7	4.3e-32	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1437812_18	UniRef90_A0A3D4KYS5	257.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1437812_18	1227360.C176_12553	69.7	0.00000000000224	ERCC4 domain	N/A
Pfam	UHGV-1437812_18	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-1437812_18	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-1437812_19	phrog_2514	100.5	1.5e-29	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1437812_19	1121441.AUCX01000014_gene525	99.4	7.35e-22	N/A	N/A
Pfam	UHGV-1437812_19	PF08279	N/A	N/A	HTH domain	HTH_11
structural_annotation	UHGV-1437812_19	PF10771,MF_01177,TIGR01714,COG5529	N/A	N/A	N/A	N/A
KOfam	UHGV-1437812_20	K02315	215.3	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1437812_20	phrog_50	210.6	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1437812_20	UniRef90_A0A6P1YAH9	296.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1437812_20	293826.Amet_2601	239.0	0	DNA replication protein	N/A
Pfam	UHGV-1437812_20	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-1437812_20	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-1437812_20	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1437812_20	PF01695,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1437812_21	phrog_5051	115.4	4.8e-34	N/A	unknown function
UniRef90	UHGV-1437812_22	UniRef90_B0MKX7	322.0	0	N/A	N/A
structural_annotation	UHGV-1437812_23	PF07374	N/A	N/A	N/A	N/A
KOfam	UHGV-1437812_24	K07474	85.4	1.4e-24	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1437812_24	phrog_51	86.6	3.3e-25	terminase small subunit	head and packaging
UniRef90	UHGV-1437812_24	UniRef90_R6RJD3	234.0	0	Phage Terminase Small Subunit	N/A
eggNOG-mapper	UHGV-1437812_24	1160721.RBI_II00483	119.0	5.11e-33	DNA packaging	N/A
Pfam	UHGV-1437812_24	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1437812_24	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1437812_24	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1437812_25	K06909	110.1	2.5e-32	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1437812_25	phrog_2	84.6	1.8e-24	terminase large subunit	head and packaging
UniRef90	UHGV-1437812_25	UniRef90_R6RCX9	907.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-1437812_25	1282664.H354_06621	626.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1437812_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1437812_25	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1437812_26	phrog_533	252.7	0	portal protein	head and packaging
UniRef90	UHGV-1437812_26	UniRef90_R6RJD0	954.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1437812_26	717606.PaecuDRAFT_3119	437.0	0	N/A	N/A
Pfam	UHGV-1437812_26	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1437812_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1437812_27	phrog_581	74.9	1.1e-21	minor head protein	head and packaging
UniRef90	UHGV-1437812_27	UniRef90_A0A357AYQ8	157.0	7.28675e-44	Capsid protein (Fragment)	N/A
eggNOG-mapper	UHGV-1437812_27	1507.HMPREF0262_01176	146.0	2.13e-38	Phage minor capsid protein 2	N/A
Pfam	UHGV-1437812_27	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1437812_27	COG2369	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1437812	Yes	20,094	44	51	1