Viral OTU vOTU-100351

vOTU: vOTU-100351

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-100351
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 → vSUBFAM-05284 → vOTU-100351
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruthenibacterium → Ruthenibacterium lactatiformans
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-2156330
Biosample ID	N/A
Length	31,671 bps
CheckV Completeness	65.19% (Medium-quality)
CDS Count	44
CDS Density	84.82%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.19)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2156330_1	K14059	210.5	0	int; integrase	N/A
PHROG	UHGV-2156330_1	phrog_1	184.9	0	integrase	integration and excision
UniRef90	UHGV-2156330_1	UniRef90_UPI001F2D3F74	879.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-2156330_1	1042156.CXIVA_10360	612.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2156330_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-2156330_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2156330_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2156330_1	PF00589,PF13102,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-2156330_2	UniRef90_UPI001F29D14E	546.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2156330_2	1042156.CXIVA_10350	344.0	0	Helix-turn-helix domain	N/A
Pfam	UHGV-2156330_2	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-2156330_2	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
UniRef90	UHGV-2156330_3	UniRef90_UPI001F29364F	132.0	5.33e-39	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2156330_3	796942.HMPREF9623_01988	107.0	4.58e-30	DNA binding domain, excisionase family	N/A
Pfam	UHGV-2156330_3	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-2156330_3	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-2156330_3	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
KOfam	UHGV-2156330_4	K07171	114.0	1.8e-33	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-2156330_4	phrog_1936	134.3	6.8e-40	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2156330_4	UniRef90_UPI001F36B337	264.0	0	type II toxin-antitoxin system PemK/MazF family toxin	N/A
eggNOG-mapper	UHGV-2156330_4	1410624.JNKK01000001_gene665	240.0	0	Toxic component of a toxin-antitoxin (TA) module	N/A
Pfam	UHGV-2156330_4	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-2156330_4	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-2156330_4	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
PHROG	UHGV-2156330_5	phrog_1033	64.3	2.4e-18	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2156330_5	UniRef90_UPI001F2D288F	508.0	0	type II toxin-antitoxin system PemK/MazF family toxin	N/A
eggNOG-mapper	UHGV-2156330_5	1042156.CXIVA_10310	328.0	0	Toxic component of a toxin-antitoxin (TA) module	N/A
Pfam	UHGV-2156330_5	PF20188	N/A	N/A	N/A	DUF6551
COG	UHGV-2156330_5	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-2156330_5	PF20188,MF_02015,TIGR04172,COG1475	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2156330_6	1410624.JNKK01000001_gene663	274.0	0	N/A	N/A
COG	UHGV-2156330_6	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-2156330_6	MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-2156330_7	K21686	48.9	0.000000000000056	prpR; XRE family transcriptional regulator, fatty acid utilization regulator	N/A
PHROG	UHGV-2156330_7	phrog_5823	42.9	0.0000000000057	transcriptional regulator	transcription regulation
UniRef90	UHGV-2156330_7	UniRef90_A0A174BM11	110.0	7.98e-30	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-2156330_7	411467.BACCAP_04810	75.1	1.56e-16	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2156330_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2156330_7	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2156330_7	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-2156330_8	UniRef90_A0A417SVQ6	77.4	1.6e-17	Translation initiation factor 2	N/A
eggNOG-mapper	UHGV-2156330_8	903814.ELI_2779	75.5	1.55e-17	N/A	N/A
structural_annotation	UHGV-2156330_8	PF13719,NF038384	N/A	N/A	N/A	N/A
KOfam	UHGV-2156330_9	K01356	131.7	8.8e-39	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-2156330_9	phrog_811	54.8	8.8e-16	UmuD-like protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2156330_9	UniRef90_UPI001F21205D	380.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2156330_9	796942.HMPREF9623_01984	332.0	0	Peptidase S24-like	N/A
Pfam	UHGV-2156330_9	PF09339	N/A	N/A	IclR helix-turn-helix domain	HTH_IclR
Pfam	UHGV-2156330_9	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-2156330_9	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-2156330_9	PF00717,PF01381,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
KOfam	UHGV-2156330_10	K13573	86.4	3.5e-25	pafC; proteasome accessory factor C	N/A
UniRef90	UHGV-2156330_10	UniRef90_UPI001F48164D	617.0	0	WYL domain-containing protein	N/A
eggNOG-mapper	UHGV-2156330_10	903814.ELI_2783	337.0	0	WYL domain	N/A
PADLOC	UHGV-2156330_10	pfam13280	94.5	1.9e-27	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated_signaling	CRISPR-CAS
Pfam	UHGV-2156330_10	PF13280	N/A	N/A	WYL domain	WYL
COG	UHGV-2156330_10	COG2378	N/A	N/A	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	N/A
structural_annotation	UHGV-2156330_10	PF13280,TIGR03985,COG2378	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2156330_11	1487921.DP68_17235	343.0	0	N/A	N/A
UniRef90	UHGV-2156330_12	UniRef90_J7TJT3	77.4	5.39e-17	NERD domain-containing protein	N/A
eggNOG-mapper	UHGV-2156330_12	588581.Cpap_0193	67.8	0.00000000000298	UvrD-like helicase C-terminal domain	N/A
COG	UHGV-2156330_12	COG0210	N/A	N/A	Superfamily I DNA or RNA helicase	N/A
PHROG	UHGV-2156330_13	phrog_26285	334.0	0	N/A	unknown function
UniRef90	UHGV-2156330_13	UniRef90_UPI001F407516	828.0	0	relaxase/mobilization nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-2156330_13	1321782.HMPREF1986_00261	592.0	0	Relaxase/Mobilisation nuclease domain	N/A
Pfam	UHGV-2156330_13	PF03432	N/A	N/A	Relaxase/Mobilisation nuclease domain	Relaxase
COG	UHGV-2156330_13	COG3843	N/A	N/A	Type IV secretory pathway, VirD2 component (relaxase)	N/A
structural_annotation	UHGV-2156330_13	PF03432,NF040665,COG3843	N/A	N/A	N/A	N/A
PHROG	UHGV-2156330_14	phrog_16589	70.8	1.3e-20	restriction endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2156330_14	UniRef90_A0A349IMM0	98.2	5.38e-24	LlaJI family restriction endonuclease (Fragment)	N/A
eggNOG-mapper	UHGV-2156330_14	515620.EUBELI_01791	114.0	1.9e-28	LlaJI restriction endonuclease	N/A
PADLOC	UHGV-2156330_14	REase_II_00151	76.6	5.7e-22	Type II restriction enzyme	RM
KOfam	UHGV-2156330_15	K01356	85.6	4.9e-25	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-2156330_15	phrog_4	122.6	2.9e-36	transcriptional repressor	transcription regulation
UniRef90	UHGV-2156330_15	UniRef90_UPI0019679522	528.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2156330_15	665956.HMPREF1032_04076	412.0	0	Peptidase S24-like	N/A
Pfam	UHGV-2156330_15	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-2156330_15	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-2156330_15	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2156330_15	PF00717,PF12844,MF_00015,TIGR00498,TIGR03070,COG1974,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-2156330_16	UniRef90_UPI000AE5279C	93.6	1.73e-23	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-2156330_16	97139.C824_00056	51.2	0.000000143	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-2156330_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-2156330_16	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-2156330_22	phrog_310	308.2	0	transposase	integration and excision
UniRef90	UHGV-2156330_22	UniRef90_UPI0019683E94	1244.0	0	Mu transposase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-2156330_22	665956.HMPREF1032_02979	464.0	0	Mu transposase, C-terminal	N/A
Pfam	UHGV-2156330_22	PF09039	N/A	N/A	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
Pfam	UHGV-2156330_22	PF00665	N/A	N/A	Integrase core domain	rve
Pfam	UHGV-2156330_22	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-2156330_22	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-2156330_22	PF02914,PF09039,PF09299,PF21531,NF033594,TIGR01764,COG3316,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-2156330_23	K07132	100.3	2e-29	MuB; ATP-dependent target DNA activator	N/A
PHROG	UHGV-2156330_23	phrog_296	148.3	5.74532e-44	DNA transposition protein	integration and excision
UniRef90	UHGV-2156330_23	UniRef90_UPI000AB75149	600.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-2156330_23	552398.HMPREF0866_03135	281.0	0	AAA domain	N/A
Pfam	UHGV-2156330_23	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-2156330_23	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
structural_annotation	UHGV-2156330_23	PF13401,MF_01407,TIGR03015,COG2842	N/A	N/A	N/A	N/A
PHROG	UHGV-2156330_25	phrog_36365	66.3	3.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-2156330_25	665956.HMPREF1032_02975	106.0	7.09e-30	N/A	N/A
PHROG	UHGV-2156330_26	phrog_2717	53.5	0.0000000000000038	N/A	unknown function
eggNOG-mapper	UHGV-2156330_26	665956.HMPREF1032_04088	245.0	0	N/A	N/A
UniRef90	UHGV-2156330_27	UniRef90_UPI001967CCF1	79.7	9.12e-17	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-2156330_27	PF04218,NF040595,COG1710	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2156330_30	PF06657	N/A	N/A	N/A	N/A
PHROG	UHGV-2156330_32	phrog_491	98.7	5.6e-29	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2156330_32	UniRef90_A0A6N3F7T2	187.0	0	Bacteriophage Mu Gam like protein	N/A
eggNOG-mapper	UHGV-2156330_32	665956.HMPREF1032_04094	305.0	0	Bacteriophage Mu Gam like protein	N/A
Pfam	UHGV-2156330_32	PF07352	N/A	N/A	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
COG	UHGV-2156330_32	COG4396	N/A	N/A	Mu-like prophage host-nuclease inhibitor protein Gam	N/A
structural_annotation	UHGV-2156330_32	PF07352,COG4396	N/A	N/A	N/A	N/A
PHROG	UHGV-2156330_33	phrog_286	67.6	2e-19	N/A	unknown function
UniRef90	UHGV-2156330_33	UniRef90_A0A372V1N5	318.0	0	Regulatory protein GemA	N/A
eggNOG-mapper	UHGV-2156330_33	665956.HMPREF1032_04095	320.0	0	N/A	N/A
Pfam	UHGV-2156330_33	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
structural_annotation	UHGV-2156330_33	PF06252	N/A	N/A	N/A	N/A
PHROG	UHGV-2156330_34	phrog_836	50.0	0.000000000000028	late transcriptional activator	transcription regulation
UniRef90	UHGV-2156330_34	UniRef90_G9RN15	249.0	0	Mor domain-containing protein	N/A
eggNOG-mapper	UHGV-2156330_34	665956.HMPREF1032_01634	249.0	0	Mor transcription activator family	N/A
Pfam	UHGV-2156330_34	PF08765	N/A	N/A	Mor transcription activator family	Mor
COG	UHGV-2156330_34	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
UniRef90	UHGV-2156330_35	UniRef90_A0A372V349	125.0	1.51e-34	N/A	N/A
eggNOG-mapper	UHGV-2156330_35	665956.HMPREF1032_01633	192.0	0	N/A	N/A
PHROG	UHGV-2156330_36	phrog_25462	83.5	1.9e-24	N/A	unknown function
UniRef90	UHGV-2156330_36	UniRef90_A0A349GP70	76.3	9.25e-16	Type VI secretion protein	N/A
eggNOG-mapper	UHGV-2156330_36	665956.HMPREF1032_01632	214.0	0	N/A	N/A
structural_annotation	UHGV-2156330_36	PF01638,MF_01819,NF002926,COG1733	N/A	N/A	N/A	N/A
PHROG	UHGV-2156330_37	phrog_426	87.9	1.5e-25	terminase small subunit	head and packaging
UniRef90	UHGV-2156330_37	UniRef90_UPI000AA50A3B	334.0	0	N/A	N/A
eggNOG-mapper	UHGV-2156330_37	411471.SUBVAR_07001	153.0	9.80909e-45	N/A	N/A
Pfam	UHGV-2156330_37	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-2156330_37	PF11985	N/A	N/A	N/A	N/A
KOfam	UHGV-2156330_38	K02601	73.1	3.9e-21	nusG; transcription termination/antitermination protein NusG	N/A
PHROG	UHGV-2156330_38	phrog_6386	110.6	1.1e-32	transcription antiterminator	transcription regulation
UniRef90	UHGV-2156330_38	UniRef90_A0A372V164	317.0	0	Antitermination protein NusG	N/A
eggNOG-mapper	UHGV-2156330_38	665956.HMPREF1032_01630	296.0	0	Transcription termination factor nusG	N/A
Pfam	UHGV-2156330_38	PF02357	N/A	N/A	Transcription termination factor nusG	NusG
COG	UHGV-2156330_38	COG0250	N/A	N/A	Transcription termination/antitermination protein NusG	N/A
structural_annotation	UHGV-2156330_38	PF02357,MF_00951,NF033641,COG0250	N/A	N/A	N/A	N/A
KOfam	UHGV-2156330_40	K06909	389.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2156330_40	phrog_3717	162.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-2156330_40	UniRef90_G9RTS3	776.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-2156330_40	665956.HMPREF1032_02957	776.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2156330_40	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2156330_40	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2156330_40	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2156330_40	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2156330_40	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2156330_42	phrog_533	141.3	5.4006e-42	portal protein	head and packaging
UniRef90	UHGV-2156330_42	UniRef90_G9RTS1	862.0	0	A118 family phage portal protein, putative	N/A
eggNOG-mapper	UHGV-2156330_42	411471.SUBVAR_06996	422.0	0	N/A	N/A
structural_annotation	UHGV-2156330_42	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2156330_43	K11044	56.3	1.3e-16	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	N/A
PHROG	UHGV-2156330_43	phrog_581	166.2	0	minor head protein	head and packaging
UniRef90	UHGV-2156330_43	UniRef90_A0A6N3F6N5	919.0	0	Epidermal cell differentiation inhibitor	N/A
eggNOG-mapper	UHGV-2156330_43	665956.HMPREF1032_02954	726.0	0	N/A	N/A
Pfam	UHGV-2156330_43	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-2156330_43	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-2156330_43	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2156330_43	PF06152,PF03496,MF_04139,NF041404	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2156330	Yes	31,671	52	65	1