Viral OTU vOTU-100586

vOTU: vOTU-100586

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-100586
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-06418 → vOTU-100586
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminococcus_C → Ruminococcus_C sp000433635
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0026530
Biosample ID	SAMEA4766015
Length	18,359 bps
CheckV Completeness	51.33% (Medium-quality)
CDS Count	36
CDS Density	90.72%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 51.33)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0026530_1	K14059	186.9	0	int; integrase	N/A
PHROG	UHGV-0026530_1	phrog_1	190.0	0	integrase	integration and excision
UniRef90	UHGV-0026530_1	UniRef90_UPI000682AD88	184.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0026530_1	887929.HMP0721_1295	153.0	1.58001e-40	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0026530_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0026530_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0026530_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0026530_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0026530_2	phrog_4611	81.9	5.3e-24	minor head protein	head and packaging
UniRef90	UHGV-0026530_2	UniRef90_A0A174ZSI5	122.0	8.57e-32	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0026530_2	86416.Clopa_3380	97.4	2.52e-21	Phage minor capsid protein 2	N/A
Pfam	UHGV-0026530_2	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0026530_2	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0026530_3	phrog_8	47.7	0.00000000000029	transcriptional regulator	transcription regulation
UniRef90	UHGV-0026530_3	UniRef90_A0A174UQT6	89.0	1.07e-20	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0026530_3	97138.C820_00805	79.0	1.27e-16	Cro/C1-type HTH DNA-binding domain	N/A
KOfam	UHGV-0026530_4	K07729	57.6	3.1e-16	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0026530_4	phrog_8	51.8	0.00000000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-0026530_4	UniRef90_R5V072	74.7	4.69e-16	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0026530_4	445335.CBN_3090	51.6	0.000000373	Helix-turn-helix domain	N/A
PADLOC	UHGV-0026530_4	retron_type_VI_hth_cluster2_1	46.9	0.00000000000087	N/A	Retron
Pfam	UHGV-0026530_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0026530_4	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0026530_4	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0026530_5	phrog_1726	199.2	0	anti-repressor	transcription regulation
UniRef90	UHGV-0026530_5	UniRef90_H1BHQ1	203.0	0	ORF6N domain-containing protein	N/A
eggNOG-mapper	UHGV-0026530_5	1095747.HMPREF1049_1815	144.0	2.82e-39	AntA/AntB antirepressor	N/A
Pfam	UHGV-0026530_5	PF10543	N/A	N/A	ORF6N domain	ORF6N
COG	UHGV-0026530_5	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0026530_5	PF10543,PF03374,TIGR02681,COG3646	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026530_8	1145276.T479_16435	46.2	0.00000998	N/A	N/A
structural_annotation	UHGV-0026530_8	PF05339,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0026530_11	K07741	192.3	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0026530_11	phrog_63	164.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0026530_11	UniRef90_I6SN64	299.0	0	Antirepressor	N/A
eggNOG-mapper	UHGV-0026530_11	1197953.I6SN64_9CAUD	299.0	0	DNA binding	N/A
Pfam	UHGV-0026530_11	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0026530_11	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-0026530_11	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-0026530_23	phrog_155	140.5	1.10002e-41	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026530_23	UniRef90_R5V6A9	368.0	0	Erf family protein	N/A
eggNOG-mapper	UHGV-0026530_23	1329250.WOSG25_420010	179.0	0	ERF superfamily	N/A
Pfam	UHGV-0026530_23	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0026530_23	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0026530_24	phrog_3490	87.7	1.4e-25	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026530_24	UniRef90_A0A352DNR2	180.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0026530_24	1499683.CCFF01000005_gene55	69.7	0.00000000000488	ERCC4 domain	N/A
Pfam	UHGV-0026530_24	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0026530_24	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0026530_25	K03111	134.7	1.1e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0026530_25	phrog_44	146.2	1.79366e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026530_25	UniRef90_R5VJF6	324.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0026530_25	411473.RUMCAL_03263	166.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0026530_25	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0026530_25	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0026530_25	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0026530_25	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0026530_25	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0026530_26	phrog_2514	83.8	2.3e-24	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026530_26	UniRef90_A0A318KSV9	118.0	5.52e-29	DnaD/phage-associated family protein	N/A
eggNOG-mapper	UHGV-0026530_26	665956.HMPREF1032_02617	124.0	1.11e-31	Phage replisome organizer, N-terminal domain protein	N/A
COG	UHGV-0026530_26	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0026530_26	PF10771,MF_01177,TIGR01714,COG5529	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026530_27	PF13613	N/A	N/A	N/A	N/A
PHROG	UHGV-0026530_32	phrog_36	78.8	7.7e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0026530_32	UniRef90_R7GSL5	82.0	2.31e-17	Putative RNA polymerase sigma 28 subunit FliA/WhiG subfamily	N/A
Pfam	UHGV-0026530_32	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-0026530_32	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0026530_32	PF04545,MF_00674,TIGR02980,COG1595	N/A	N/A	N/A	N/A
PHROG	UHGV-0026530_33	phrog_24579	95.8	3e-28	terminase small subunit	head and packaging
UniRef90	UHGV-0026530_33	UniRef90_A0A3C0II61	283.0	0	HTH_Tnp_1_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0026530_33	1123288.SOV_2c10540	70.5	0.000000000000446	Helix-turn-helix of insertion element transposase	N/A
Pfam	UHGV-0026530_33	PF13022	N/A	N/A	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
KOfam	UHGV-0026530_34	K06909	144.3	1.10002e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0026530_34	phrog_10250	161.5	0	N/A	unknown function
UniRef90	UHGV-0026530_34	UniRef90_A0A3D5KXX3	828.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0026530_34	641112.ACOK01000073_gene2888	500.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0026530_34	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0026530_34	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0026530_34	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0026530_34	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0026530_35	phrog_533	315.8	0	portal protein	head and packaging
UniRef90	UHGV-0026530_35	UniRef90_U2KRP5	559.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0026530_35	411473.RUMCAL_01924	559.0	0	N/A	N/A
structural_annotation	UHGV-0026530_35	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0026530_36	phrog_581	86.2	5.1e-25	minor head protein	head and packaging
UniRef90	UHGV-0026530_36	UniRef90_A0A349GQA4	141.0	1.16e-39	Phage capsid protein (Fragment)	N/A
eggNOG-mapper	UHGV-0026530_36	411473.RUMCAL_01925	196.0	0	N/A	N/A
Pfam	UHGV-0026530_36	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0026530_36	COG2369	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0026530	Yes	18,359	45	51	1