Viral OTU vOTU-100906

vOTU: vOTU-100906

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-100906
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-02508 → vOTU-100906
Host Lineage	Bacteria → Firmicutes
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1424425
Biosample ID	SAMEA2738033
Length	21,865 bps
CheckV Completeness	53.57% (Medium-quality)
CDS Count	40
CDS Density	92.86%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.57)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1424425_1	K08217	63.1	3.1e-18	mef; MFS transporter, DHA3 family, macrolide efflux protein	N/A
UniRef90	UHGV-1424425_1	UniRef90_C5NVZ9	353.0	0	Transporter, major facilitator family protein	N/A
eggNOG-mapper	UHGV-1424425_1	546270.GEMHA0001_0810	353.0	0	Major facilitator Superfamily	N/A
COG	UHGV-1424425_1	COG0477	N/A	N/A	MFS family permease, includes anhydromuropeptide permease AmpG	N/A
KOfam	UHGV-1424425_2	K14059	175.7	0	int; integrase	N/A
PHROG	UHGV-1424425_2	phrog_1	189.1	0	integrase	integration and excision
UniRef90	UHGV-1424425_2	UniRef90_A0A6H1F1F5	315.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1424425_2	562981.HMPREF0428_01865	315.0	0	Phage integrase family	N/A
Pfam	UHGV-1424425_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1424425_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1424425_2	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1424425_5	phrog_1516	172.1	0	N/A	unknown function
UniRef90	UHGV-1424425_5	UniRef90_UPI0013562AC4	270.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1424425_5	1158614.I592_02302	133.0	6.92e-35	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1424425_5	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1424425_5	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1424425_5	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1424425_6	K22299	40.7	0.000000000043	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1424425_6	phrog_8	78.7	8.4e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-1424425_6	UniRef90_UPI001F447690	143.0	3.67981e-42	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1424425_6	1000588.HMPREF9965_1729	102.0	1.64e-26	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1424425_6	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1424425_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1424425_6	PF12844,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1424425_7	phrog_1468	50.8	0.000000000000017	transcriptional repressor	transcription regulation
UniRef90	UHGV-1424425_7	UniRef90_UPI001939A681	47.8	0.00000946	helix-turn-helix domain-containing protein	N/A
PHROG	UHGV-1424425_8	phrog_6178	44.8	0.0000000000016	N/A	unknown function
UniRef90	UHGV-1424425_11	UniRef90_UPI0019589D40	141.0	2.20004e-42	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1424425_11	562981.HMPREF0428_01011	71.2	0.0000000000000565	dUTPase	N/A
Pfam	UHGV-1424425_11	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1424425_11	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1424425_11	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1424425_12	phrog_173	93.2	3.2e-27	nucleoside triphosphate pyrophosphohydrolase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1424425_12	UniRef90_U2QNQ7	191.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1424425_12	1321820.HMPREF1983_00952	191.0	0	dUTPase	N/A
Pfam	UHGV-1424425_12	PF08761	N/A	N/A	dUTPase	dUTPase_2
COG	UHGV-1424425_12	COG4508	N/A	N/A	Dimeric dUTPase, all-alpha-NTP-PPase (MazG) superfamily	N/A
structural_annotation	UHGV-1424425_12	PF08761,COG4508	N/A	N/A	N/A	N/A
KOfam	UHGV-1424425_13	K22300	49.0	0.00000000000012	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1424425_13	phrog_8	45.9	0.0000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-1424425_13	UniRef90_UPI0019598525	159.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1424425_13	562981.HMPREF0428_01853	80.1	5.5e-18	sequence-specific DNA binding	N/A
Pfam	UHGV-1424425_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1424425_13	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1424425_13	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1424425_15	phrog_236	75.8	9.7e-22	nucleotide kinase	other
UniRef90	UHGV-1424425_15	UniRef90_UPI0019595D10	224.0	0	N/A	N/A
Pfam	UHGV-1424425_15	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1424425_15	PF11753	N/A	N/A	N/A	N/A
KOfam	UHGV-1424425_16	K03546	60.1	2.5e-17	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1424425_16	phrog_1499	465.8	0	N/A	unknown function
UniRef90	UHGV-1424425_16	UniRef90_F0SXE0	404.0	0	SMC domain protein	N/A
eggNOG-mapper	UHGV-1424425_16	645991.Sgly_0320	404.0	0	domain protein	N/A
Pfam	UHGV-1424425_16	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1424425_16	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1424425_16	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-1424425_17	phrog_124	262.7	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1424425_17	UniRef90_UPI000657C712	410.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1424425_17	1403946.Q615_SPAC00127G0154	405.0	0	AAA domain	N/A
Pfam	UHGV-1424425_17	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1424425_17	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1424425_18	phrog_2698	188.5	0	N/A	unknown function
UniRef90	UHGV-1424425_18	UniRef90_A0A4V0ECJ9	201.0	0	N/A	N/A
eggNOG-mapper	UHGV-1424425_18	1403946.Q615_SPAC00127G0153	202.0	0	N/A	N/A
structural_annotation	UHGV-1424425_18	PF17426,NF005674	N/A	N/A	N/A	N/A
KOfam	UHGV-1424425_19	K17677	360.4	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-1424425_19	phrog_16	288.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1424425_19	UniRef90_A0A3S4LKW2	793.0	0	DNA/RNA helicase	N/A
eggNOG-mapper	UHGV-1424425_19	1403946.Q615_SPAC00127G0152	777.0	0	the current gene model (or a revised gene model) may contain a frame shift	N/A
PADLOC	UHGV-1424425_19	mREase_IV_00005	126.0	3.2e-37	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1424425_19	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1424425_19	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1424425_19	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1424425_19	PF00271,MF_00967,TIGR04095,COG1061	N/A	N/A	N/A	N/A
KOfam	UHGV-1424425_21	K07505	420.7	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-1424425_21	phrog_2597	1189.4	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1424425_21	UniRef90_I2NHT6	1050.0	0	Primase C-terminal 2 domain protein	N/A
eggNOG-mapper	UHGV-1424425_21	936580.HMPREF1516_0733	1029.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-1424425_21	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-1424425_21	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1424425_21	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-1424425_21	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
PHROG	UHGV-1424425_22	phrog_140	78.8	8.6e-23	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1424425_22	UniRef90_A0A1C0BS99	127.0	2.13e-35	Crossover junction endodeoxyribonuclease RuvA	N/A
eggNOG-mapper	UHGV-1424425_22	936580.HMPREF1516_0732	117.0	4.32e-32	crossover junction endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1424425_22	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1424425_22	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1424425_22	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1424425_23	K07727	42.1	0.000000000018	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-1424425_23	UniRef90_A0A2X4N3T8	76.6	2.95e-17	Predicted transcriptional regulator	N/A
Pfam	UHGV-1424425_23	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1424425_23	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-1424425_23	PF13443,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1424425_29	TIGR02338	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1424425_30	PF10957	N/A	N/A	N/A	N/A
PHROG	UHGV-1424425_31	phrog_98	61.5	1.5e-17	N/A	unknown function
UniRef90	UHGV-1424425_31	UniRef90_UPI0019591376	171.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-1424425_31	562981.HMPREF0428_00992	76.3	3.8e-16	YopX protein	N/A
Pfam	UHGV-1424425_31	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1424425_31	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1424425_34	phrog_3205	136.1	2e-40	N/A	unknown function
UniRef90	UHGV-1424425_34	UniRef90_E6EWD7	103.0	2.35e-24	EF-hand domain-containing protein	N/A
eggNOG-mapper	UHGV-1424425_34	1158602.I590_02965	105.0	1e-25	N/A	N/A
UniRef90	UHGV-1424425_35	UniRef90_UPI001A470AE5	174.0	0	med21 domain-containing protein	N/A
eggNOG-mapper	UHGV-1424425_35	562981.HMPREF0428_01830	165.0	0	N/A	N/A
UniRef90	UHGV-1424425_36	UniRef90_UPI001A470AE5	100.0	1.05e-23	med21 domain-containing protein	N/A
eggNOG-mapper	UHGV-1424425_36	562981.HMPREF0428_01830	98.2	6.73e-24	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1424425	Yes	21,865	30	54	1