Viral OTU vOTU-102057

vOTU: vOTU-102057

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-102057
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-05595 → vOTU-102057
Host Lineage	Bacteria → Firmicutes → Bacilli → Staphylococcales → Gemellaceae → Gemella → Gemella morbillorum
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-1516894
Biosample ID	SAMEA2737935
Length	33,788 bps
CheckV Completeness	87.85% (Medium-quality)
CDS Count	48
CDS Density	95.00%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 87.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1516894_2	phrog_7854	98.7	2.5e-31	endolysin	lysis
UniRef90	UHGV-1516894_2	UniRef90_A0A2X4NBX1	458.0	0	Autolysin	N/A
eggNOG-mapper	UHGV-1516894_2	562983.HMPREF0433_01288	182.0	0	Bacterial SH3 domain	N/A
Pfam	UHGV-1516894_2	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1516894_2	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1516894_2	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1516894_2	PF19127,PF05382,TIGR04035,NF008096,COG5263,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_3	phrog_1129	70.6	1.4e-20	holin	lysis
UniRef90	UHGV-1516894_3	UniRef90_U2RW65	108.0	5.16e-29	Holin family protein	N/A
eggNOG-mapper	UHGV-1516894_3	1321820.HMPREF1983_00916	108.0	8.66e-30	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1516894_3	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1516894_3	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_4	phrog_199	61.7	9.2e-18	holin	lysis
UniRef90	UHGV-1516894_4	UniRef90_A0A2X4RDZ6	233.0	0	Phage-related holin (Lysis protein)	N/A
eggNOG-mapper	UHGV-1516894_4	1140002.I570_02928	144.0	5.66125e-43	Bacteriophage holin family	N/A
Pfam	UHGV-1516894_4	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1516894_4	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1516894_4	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1516894_6	525255.HMPREF0077_0366	53.9	0.00000705	N/A	N/A
structural_annotation	UHGV-1516894_6	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_8	phrog_7841	165.0	0	N/A	unknown function
UniRef90	UHGV-1516894_8	UniRef90_A0A2X4NGA9	916.0	0	Gp58-like protein	N/A
eggNOG-mapper	UHGV-1516894_8	644007.C5J973_9CAUD	198.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1516894_8	PF07902	N/A	N/A	gp58-like protein	Gp58
Pfam	UHGV-1516894_8	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1516894_8	PF13884	N/A	N/A	N/A	N/A
KOfam	UHGV-1516894_10	K06237	54.4	4.1e-16	COL4A; collagen type IV alpha	N/A
PHROG	UHGV-1516894_10	phrog_6049	92.6	1.2e-32	tail fiber protein	tail
UniRef90	UHGV-1516894_10	UniRef90_A0A2X4N6M2	243.0	0	Collagen triple helix repeat (20 copies)	N/A
eggNOG-mapper	UHGV-1516894_10	482234.SCAZ3_03785	79.7	0.0000000000000126	translation initiation factor activity	N/A
Pfam	UHGV-1516894_10	PF18454	N/A	N/A	Major tropism determinant N-terminal domain	Mtd_N
Pfam	UHGV-1516894_10	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1516894_10	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1516894_10	PF18454	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_11	phrog_2270	309.6	0	N/A	unknown function
UniRef90	UHGV-1516894_11	UniRef90_A0A2X4N412	1140.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1516894_11	562981.HMPREF0428_00970	642.0	0	Phage minor structural protein	N/A
NCBIFam	UHGV-1516894_11	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1516894_11	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1516894_11	PF14594,PF13620,TIGR01665,TIGR04183,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_12	phrog_33	65.6	1.1e-18	distal tail protein Dit	tail
UniRef90	UHGV-1516894_12	UniRef90_A0A2X4NBW4	475.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1516894_12	562981.HMPREF0428_00971	439.0	0	phage tail	N/A
COG	UHGV-1516894_12	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1516894_12	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_13	phrog_1204	538.9	0	tail protein	tail
UniRef90	UHGV-1516894_13	UniRef90_A0A2X4R133	1132.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1516894_13	562981.HMPREF0428_00972	753.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1516894_13	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1516894_13	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1516894_13	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1516894_14	phrog_706	207.0	0	N/A	unknown function
UniRef90	UHGV-1516894_14	UniRef90_A0A2X4RDY7	377.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1516894_14	562981.HMPREF0428_00973	259.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1516894_14	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1516894_14	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_15	phrog_1061	62.6	7.4e-18	N/A	unknown function
UniRef90	UHGV-1516894_15	UniRef90_A0A139RN56	87.4	7.23e-20	N/A	N/A
eggNOG-mapper	UHGV-1516894_15	562981.HMPREF0428_00974	134.0	6.04e-39	N/A	N/A
structural_annotation	UHGV-1516894_15	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_16	phrog_820	165.8	0	major tail protein	tail
UniRef90	UHGV-1516894_16	UniRef90_A0A0X8KMB0	250.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1516894_16	562981.HMPREF0428_00975	237.0	0	N/A	N/A
structural_annotation	UHGV-1516894_16	PF08813,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_17	phrog_913	145.7	1.30321e-43	minor head protein	head and packaging
UniRef90	UHGV-1516894_17	UniRef90_A0A2X4NB85	256.0	0	Minor capsid protein from bacteriophage	N/A
eggNOG-mapper	UHGV-1516894_17	562981.HMPREF0428_00976	215.0	0	Minor capsid protein from bacteriophage	N/A
Pfam	UHGV-1516894_17	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1516894_17	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_18	phrog_556	67.7	1.6e-19	minor head protein	head and packaging
UniRef90	UHGV-1516894_18	UniRef90_A0A2X4NG99	236.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1516894_18	1214217.ALNF01000014_gene1371	113.0	5.92e-31	Minor capsid protein	N/A
Pfam	UHGV-1516894_18	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1516894_18	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_19	phrog_793	98.9	3.1e-29	head-tail adaptor	connector
UniRef90	UHGV-1516894_19	UniRef90_A0A2X4N3V8	214.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1516894_19	562981.HMPREF0428_00978	169.0	0	Minor capsid protein	N/A
Pfam	UHGV-1516894_19	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
structural_annotation	UHGV-1516894_19	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_20	phrog_541	104.5	6.6e-31	head-tail adaptor	connector
UniRef90	UHGV-1516894_20	UniRef90_A0A380K6A1	136.0	5.76e-39	N/A	N/A
eggNOG-mapper	UHGV-1516894_20	562981.HMPREF0428_00979	201.0	0	N/A	N/A
PHROG	UHGV-1516894_22	phrog_840	429.6	0	major head protein	head and packaging
UniRef90	UHGV-1516894_22	UniRef90_A0A6H1F174	498.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1516894_22	562981.HMPREF0428_00981	498.0	0	N/A	N/A
structural_annotation	UHGV-1516894_22	PF03864,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_23	phrog_194	139.6	2.20004e-41	head scaffolding protein	head and packaging
UniRef90	UHGV-1516894_23	UniRef90_A0A2X4R123	339.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1516894_23	646413.C5IUJ4_9CAUD	180.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-1516894_23	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1516894_23	PF06810	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1516894_24	562982.HMPREF0432_00874	107.0	2.33e-30	N/A	N/A
PHROG	UHGV-1516894_25	phrog_581	287.2	0	minor head protein	head and packaging
UniRef90	UHGV-1516894_25	UniRef90_A0A2X4N6F7	1060.0	0	NAD(+)--arginine ADP-ribosyltransferase EFV	N/A
eggNOG-mapper	UHGV-1516894_25	562981.HMPREF0428_00983	610.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1516894_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-1516894_25	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
structural_annotation	UHGV-1516894_25	PF06152,PF03496,NF040688	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_26	phrog_533	581.0	0	portal protein	head and packaging
UniRef90	UHGV-1516894_26	UniRef90_A0A2X4N9Z3	911.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1516894_26	562981.HMPREF0428_00984	858.0	0	portal protein	N/A
Pfam	UHGV-1516894_26	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1516894_26	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1516894_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1516894_27	K06909	272.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1516894_27	phrog_3717	159.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1516894_27	UniRef90_A0A2X4NB78	833.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1516894_27	562981.HMPREF0428_00985	798.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-1516894_27	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1516894_27	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1516894_27	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1516894_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1516894_27	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1516894_28	K07474	102.4	9e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1516894_28	phrog_51	113.1	2.6e-33	terminase small subunit	head and packaging
UniRef90	UHGV-1516894_28	UniRef90_A0A2X4NG90	252.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1516894_28	562981.HMPREF0428_01825	196.0	0	Terminase small subunit	N/A
Pfam	UHGV-1516894_28	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1516894_28	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1516894_28	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_29	phrog_36	46.1	0.00000000000085	transcriptional regulator	transcription regulation
UniRef90	UHGV-1516894_29	UniRef90_A0A533I0C4	123.0	4.29e-33	N/A	N/A
Pfam	UHGV-1516894_29	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1516894_29	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1516894_29	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1516894_31	1321820.HMPREF1983_00940	100.0	8.68e-24	N/A	N/A
structural_annotation	UHGV-1516894_31	PF20432,NF040507,COG2944	N/A	N/A	N/A	N/A
Pfam	UHGV-1516894_32	PF06289	N/A	N/A	Flagellar and Swarming motility proteins	FlbD
PHROG	UHGV-1516894_35	phrog_98	71.1	1.5e-20	N/A	unknown function
UniRef90	UHGV-1516894_35	UniRef90_UPI001F05F887	95.9	4.88e-23	YopX family protein	N/A
eggNOG-mapper	UHGV-1516894_35	562981.HMPREF0428_00992	78.2	6.74e-17	YopX protein	N/A
Pfam	UHGV-1516894_35	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1516894_35	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1516894_35	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_36	phrog_2715	124.9	4.5e-37	N/A	unknown function
UniRef90	UHGV-1516894_36	UniRef90_A0A1B8RSY6	90.5	5.6e-20	N/A	N/A
eggNOG-mapper	UHGV-1516894_36	642492.Clole_0950	122.0	3.37e-33	N/A	N/A
structural_annotation	UHGV-1516894_36	PF18406	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_37	phrog_12650	67.5	1e-19	N/A	unknown function
structural_annotation	UHGV-1516894_37	NF010673	N/A	N/A	N/A	N/A
UniRef90	UHGV-1516894_40	UniRef90_A0A2X4N3T8	125.0	1.73e-36	Predicted transcriptional regulator	N/A
eggNOG-mapper	UHGV-1516894_40	1336235.JAEG01000004_gene3864	46.2	0.00000642	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1516894_40	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1516894_40	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1516894_40	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_42	phrog_864	257.5	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1516894_42	UniRef90_A0A7Z0LHC3	449.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1516894_42	202752.JL53_03700	430.0	0	D5 N terminal like	N/A
Pfam	UHGV-1516894_42	PF19263	N/A	N/A	N/A	DUF5906
COG	UHGV-1516894_42	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1516894_42	PF19263,PF08706,PF03288,PF09250,MF_04000,TIGR01613,COG3378	N/A	N/A	N/A	N/A
KOfam	UHGV-1516894_43	K02319	59.0	1.8e-18	pol; DNA polymerase, archaea type [EC:2.7.7.7]	N/A
PHROG	UHGV-1516894_43	phrog_1252	381.9	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1516894_43	UniRef90_A0A7Z0LH61	419.0	0	DNA_pol_B domain-containing protein	N/A
eggNOG-mapper	UHGV-1516894_43	202752.JL53_03695	412.0	0	DNA polymerase elongation subunit (Family B)	N/A
COG	UHGV-1516894_43	COG0417	N/A	N/A	DNA polymerase B elongation subunit	N/A
structural_annotation	UHGV-1516894_43	PF08490,MF_04100,TIGR00592,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-1516894_44	phrog_6479	199.5	0	N/A	unknown function
UniRef90	UHGV-1516894_44	UniRef90_B6D7K3	100.0	1.61e-22	Gp30	N/A
PHROG	UHGV-1516894_45	phrog_674	60.9	8.4e-18	N/A	unknown function
Pfam	UHGV-1516894_45	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1516894_45	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-1516894_46	K06167	43.2	0.0000000000051	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-1516894_46	phrog_392	123.1	3e-36	metal-dependent hydrolase	other
UniRef90	UHGV-1516894_46	UniRef90_S4TZZ0	343.0	0	Metallo-beta-lactamase-like protein	N/A
eggNOG-mapper	UHGV-1516894_46	560178.B6D7K1_9CAUD	179.0	0	hydrolase activity	N/A
Pfam	UHGV-1516894_46	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
structural_annotation	UHGV-1516894_46	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
Pfam	UHGV-1516894_47	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1516894	Yes	33,788	33	88	1