Viral OTU vOTU-104413

vOTU: vOTU-104413

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-104413
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-06007 → vGENUS-14305 → vOTU-104413
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruthenibacterium → Ruthenibacterium lactatiformans
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-1992118
Biosample ID	SAMEA2580062
Length	23,638 bps
CheckV Completeness	50.33% (Medium-quality)
CDS Count	38
CDS Density	96.19%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.33)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1992118_1	K02314	203.7	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1992118_1	phrog_19	213.5	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1992118_1	UniRef90_A0A0W7TNB4	603.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1992118_1	665956.HMPREF1032_02618	513.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-1992118_1	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1992118_1	COG0305	N/A	N/A	Replicative DNA helicase	N/A
PHROG	UHGV-1992118_3	phrog_244	80.1	3.7e-23	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1992118_3	33035.JPJF01000122_gene2460	172.0	0	N/A	N/A
structural_annotation	UHGV-1992118_3	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-1992118_5	K00571	107.4	1.8e-31	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1992118_5	phrog_67	98.3	4.2e-30	DNA methyltransferase	other
UniRef90	UHGV-1992118_5	UniRef90_A0A3A6E967	524.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1992118_5	910314.HMPREF9220_0636	375.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1992118_5	MTase_II_00157	82.3	2.7e-25	Type II methyltransferase	RM
Pfam	UHGV-1992118_5	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1992118_5	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1992118_5	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-1992118_6	K00390	85.2	6.9e-25	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1992118_6	phrog_424	102.4	4.4e-30	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1992118_6	UniRef90_A0A372WY48	597.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-1992118_6	665956.HMPREF1032_02557	425.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1992118_6	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1992118_6	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1992118_6	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_8	phrog_6072	53.1	0.0000000000000047	N/A	unknown function
PHROG	UHGV-1992118_9	phrog_24386	104.8	6.3e-31	N/A	unknown function
UniRef90	UHGV-1992118_9	UniRef90_A0A2K9V2Y7	152.0	8.54792e-44	Polynucleotide kinase	N/A
eggNOG-mapper	UHGV-1992118_9	665956.HMPREF1032_00133	181.0	0	phosphatase activity	N/A
COG	UHGV-1992118_9	COG0561	N/A	N/A	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	N/A
UniRef90	UHGV-1992118_10	UniRef90_A0A1H1GVZ7	59.3	0.000000000427	N/A	N/A
eggNOG-mapper	UHGV-1992118_12	665956.HMPREF1032_03083	123.0	1.37e-36	N/A	N/A
PHROG	UHGV-1992118_14	phrog_478	134.1	4.7e-40	site-specific recombination directionality factor RDF	integration and excision
eggNOG-mapper	UHGV-1992118_14	665956.HMPREF1032_03082	226.0	0	N/A	N/A
PHROG	UHGV-1992118_17	phrog_1558	192.1	0	N/A	unknown function
UniRef90	UHGV-1992118_17	UniRef90_A0A6N2ZQR4	137.0	1.16e-37	HTH_11 domain-containing protein	N/A
eggNOG-mapper	UHGV-1992118_17	665956.HMPREF1032_03078	338.0	0	N/A	N/A
Pfam	UHGV-1992118_17	PF08279	N/A	N/A	HTH domain	HTH_11
structural_annotation	UHGV-1992118_17	TIGR01637,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1992118_18	K03497	66.5	7.1e-19	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1992118_18	phrog_620	183.9	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1992118_18	UniRef90_A0A372V2B3	330.0	0	Chromosome partitioning protein ParB	N/A
eggNOG-mapper	UHGV-1992118_18	665956.HMPREF1032_03077	330.0	0	DNA binding	N/A
PADLOC	UHGV-1992118_18	MTase_II_00015	116.8	3.1e-34	Type II methyltransferase	RM
Pfam	UHGV-1992118_18	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1992118_18	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1992118_18	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_19	phrog_887	173.3	0	queuine tRNA-ribosyltransferase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1992118_19	UniRef90_R6N9F6	177.0	0	Mycobacteriophage GP2 protein	N/A
eggNOG-mapper	UHGV-1992118_19	665956.HMPREF1032_03076	464.0	0	N/A	N/A
structural_annotation	UHGV-1992118_19	PF00290,MF_01634,TIGR00432,COG0269	N/A	N/A	N/A	N/A
UniRef90	UHGV-1992118_20	UniRef90_A0A372WZ60	560.0	0	Methyltransferase domain-containing protein	N/A
Pfam	UHGV-1992118_20	PF13489	N/A	N/A	Methyltransferase domain	Methyltransf_23
structural_annotation	UHGV-1992118_20	PF05891,MF_00472,NF008264,COG2227	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_21	phrog_27044	124.9	5.7e-37	N/A	unknown function
UniRef90	UHGV-1992118_21	UniRef90_A0A173WVY7	138.0	4.97e-39	Queuosine ECF transporter S component QueT	N/A
eggNOG-mapper	UHGV-1992118_21	665956.HMPREF1032_03074	290.0	0	QueT transporter	N/A
Pfam	UHGV-1992118_21	PF06177	N/A	N/A	QueT transporter	QueT
COG	UHGV-1992118_21	COG4708	N/A	N/A	ECF-type transporter of queuosine precursor, membrane (S) component	N/A
structural_annotation	UHGV-1992118_21	PF06177,MF_01572,TIGR04522,COG4708	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_22	phrog_1889	187.4	0	terminase small subunit	head and packaging
UniRef90	UHGV-1992118_22	UniRef90_A0A6P1YAL8	96.3	3.95e-20	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1992118_22	665956.HMPREF1032_03073	473.0	0	N/A	N/A
Pfam	UHGV-1992118_22	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-1992118_22	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1992118_22	PF01920,NF040601,COG1382	N/A	N/A	N/A	N/A
KOfam	UHGV-1992118_23	K06909	68.4	1.2e-19	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1992118_23	phrog_2	94.6	1.7e-27	terminase large subunit	head and packaging
UniRef90	UHGV-1992118_23	UniRef90_G9RRV1	678.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1992118_23	665956.HMPREF1032_03070	678.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1992118_23	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1992118_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1992118_23	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_24	phrog_533	326.6	0	portal protein	head and packaging
UniRef90	UHGV-1992118_24	UniRef90_G9RRV0	934.0	0	A118 family phage portal protein, putative	N/A
eggNOG-mapper	UHGV-1992118_24	665956.HMPREF1032_03069	934.0	0	N/A	N/A
structural_annotation	UHGV-1992118_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_25	phrog_581	212.2	0	minor head protein	head and packaging
UniRef90	UHGV-1992118_25	UniRef90_UPI001CD3268D	294.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1992118_25	665956.HMPREF1032_03068	742.0	0	N/A	N/A
Pfam	UHGV-1992118_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1992118_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1992118_25	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_26	phrog_194	95.5	7.1e-28	head scaffolding protein	head and packaging
UniRef90	UHGV-1992118_26	UniRef90_A0A1C5UDW0	154.0	1.05097e-43	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1992118_26	665956.HMPREF1032_03067	403.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-1992118_26	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1992118_26	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_27	phrog_422	289.9	0	major head protein	head and packaging
UniRef90	UHGV-1992118_27	UniRef90_T3D9C6	371.0	0	Putative phage major capsid protein	N/A
eggNOG-mapper	UHGV-1992118_27	665956.HMPREF1032_03066	599.0	0	COG NOG28280 non supervised orthologous group	N/A
structural_annotation	UHGV-1992118_27	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_28	phrog_1378	48.4	0.000000000000094	N/A	unknown function
UniRef90	UHGV-1992118_28	UniRef90_G9RRU6	174.0	0	C2H2-type domain-containing protein	N/A
Pfam	UHGV-1992118_28	PF13912	N/A	N/A	C2H2-type zinc finger	zf-C2H2_6
PHROG	UHGV-1992118_29	phrog_541	91.3	8.7e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-1992118_29	665956.HMPREF1032_03064	243.0	0	N/A	N/A
PHROG	UHGV-1992118_30	phrog_3366	56.6	3.7e-16	N/A	unknown function
Pfam	UHGV-1992118_30	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1992118_30	PF20536,COG1853	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_31	phrog_556	85.6	4.3e-25	minor head protein	head and packaging
UniRef90	UHGV-1992118_31	UniRef90_UPI001958E7C1	186.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1992118_31	665956.HMPREF1032_03062	298.0	0	Minor capsid protein	N/A
Pfam	UHGV-1992118_31	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1992118_31	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_32	phrog_3266	85.0	7.1e-25	tail completion	connector
eggNOG-mapper	UHGV-1992118_32	525255.HMPREF0077_0380	62.8	0.000000000142	N/A	N/A
structural_annotation	UHGV-1992118_32	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_33	phrog_3099	57.5	2.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-1992118_33	665956.HMPREF1032_03060	350.0	0	N/A	N/A
structural_annotation	UHGV-1992118_33	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_34	phrog_11299	109.8	2e-32	N/A	unknown function
eggNOG-mapper	UHGV-1992118_34	665956.HMPREF1032_03059	282.0	0	N/A	N/A
structural_annotation	UHGV-1992118_34	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_35	phrog_706	97.3	1.6e-28	N/A	unknown function
UniRef90	UHGV-1992118_35	UniRef90_UPI0013141117	234.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1992118_35	665956.HMPREF1032_03058	377.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1992118_35	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1992118_35	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_36	phrog_1535	94.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1992118_36	UniRef90_A0A1C5N853	80.1	0.0000000000117	Phage-related protein	N/A
eggNOG-mapper	UHGV-1992118_36	665956.HMPREF1032_03057	1236.0	0	tape measure	N/A
COG	UHGV-1992118_36	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1992118_37	phrog_1194	62.1	8e-18	N/A	unknown function
eggNOG-mapper	UHGV-1992118_37	665956.HMPREF1032_03056	282.0	0	N/A	N/A
structural_annotation	UHGV-1992118_37	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1992118_38	665956.HMPREF1032_03630	185.0	0	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1992118	Yes	23,638	52	50	1