Viral OTU vOTU-106050

vOTU: vOTU-106050

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-106050
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00106 → vGENUS-00431 → vOTU-106050
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1402130
Biosample ID	SAMEA3879501
Length	25,174 bps
CheckV Completeness	55.10% (Medium-quality)
CDS Count	50
CDS Density	91.07%
tRNA Count	4
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1402130_2	phrog_1233	84.7	1.1e-24	N/A	unknown function
UniRef90	UHGV-1402130_2	UniRef90_UPI001C39EFB9	160.0	0	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-1402130_2	357809.Cphy_2967	100.0	1.33e-25	N/A	N/A
KOfam	UHGV-1402130_3	K06909	213.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1402130_3	phrog_3717	90.2	1.9e-26	terminase large subunit	head and packaging
UniRef90	UHGV-1402130_3	UniRef90_A0A3R6H2I4	1061.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1402130_3	33035.JPJF01000106_gene3136	301.0	0	Terminase small subunit	N/A
Pfam	UHGV-1402130_3	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-1402130_3	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1402130_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1402130_3	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1402130_4	phrog_33130	95.3	2.9e-28	N/A	unknown function
UniRef90	UHGV-1402130_4	UniRef90_A0A3B9CD52	140.0	7.83046e-42	S1-like domain-containing protein	N/A
structural_annotation	UHGV-1402130_4	PF10922	N/A	N/A	N/A	N/A
PHROG	UHGV-1402130_5	phrog_9479	155.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1402130_5	1514668.JOOA01000002_gene2680	55.8	0.000000048	N/A	N/A
structural_annotation	UHGV-1402130_5	PF15529	N/A	N/A	N/A	N/A
PHROG	UHGV-1402130_6	phrog_8680	252.5	0	N/A	unknown function
UniRef90	UHGV-1402130_6	UniRef90_A0A3R6K733	418.0	0	N/A	N/A
eggNOG-mapper	UHGV-1402130_6	411470.RUMGNA_02208	265.0	0	N/A	N/A
Pfam	UHGV-1402130_6	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1402130_6	PF14386	N/A	N/A	N/A	N/A
KOfam	UHGV-1402130_7	K01356	48.8	0.00000000000015	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1402130_7	phrog_3502	42.7	0.00000000001	N/A	unknown function
UniRef90	UHGV-1402130_7	UniRef90_A0A6N3H8N1	159.0	0	LexA repressor	N/A
eggNOG-mapper	UHGV-1402130_7	1235799.C818_03301	75.1	5.68e-17	LexA DNA binding domain	N/A
Pfam	UHGV-1402130_7	PF01726	N/A	N/A	LexA DNA binding domain	LexA_DNA_bind
COG	UHGV-1402130_7	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1402130_7	PF01726,MF_00732,TIGR02944,COG1321	N/A	N/A	N/A	N/A
UniRef90	UHGV-1402130_8	UniRef90_A0A3R6LT65	141.0	2.63024e-42	ABC transporter ATP-binding protein	N/A
eggNOG-mapper	UHGV-1402130_12	411459.RUMOBE_01111	75.9	0.00000000000000172	N/A	N/A
KOfam	UHGV-1402130_14	K00558	225.6	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1402130_14	phrog_116	270.4	0	DNA methyltransferase	other
UniRef90	UHGV-1402130_14	UniRef90_A0A1C5S2H5	862.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1402130_14	1235800.C819_02255	644.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1402130_14	MTase_II_00020	114.0	1.2e-37	Type II methyltransferase	RM
Pfam	UHGV-1402130_14	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1402130_14	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1402130_14	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1402130_17	phrog_874	154.6	0	N/A	unknown function
UniRef90	UHGV-1402130_17	UniRef90_A0A6N7W7Q7	169.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1402130_17	411468.CLOSCI_00298	170.0	0	N/A	N/A
structural_annotation	UHGV-1402130_17	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1402130_19	phrog_8684	85.3	4.8e-25	N/A	unknown function
UniRef90	UHGV-1402130_19	UniRef90_A0A3E4GMQ5	167.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1402130_19	457412.RSAG_01162	161.0	0	YopX protein	N/A
Pfam	UHGV-1402130_19	PF09643	N/A	N/A	YopX protein	YopX
Pfam	UHGV-1402130_19	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1402130_19	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-1402130_19	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
PHROG	UHGV-1402130_21	phrog_20593	52.8	0.0000000000000057	N/A	unknown function
PHROG	UHGV-1402130_23	phrog_8684	115.7	2.8e-34	N/A	unknown function
UniRef90	UHGV-1402130_23	UniRef90_C7GC23	273.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1402130_23	397290.C810_01526	76.3	6.23e-16	YopX protein	N/A
Pfam	UHGV-1402130_23	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1402130_23	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1402130_24	phrog_26165	62.7	6.5e-18	N/A	unknown function
PHROG	UHGV-1402130_26	phrog_38832	50.3	0.000000000000039	N/A	unknown function
UniRef90	UHGV-1402130_26	UniRef90_A0A415TX35	166.0	0	BAH domain-containing protein	N/A
eggNOG-mapper	UHGV-1402130_26	476272.RUMHYD_03348	63.9	0.0000000000607	N/A	N/A
PHROG	UHGV-1402130_27	phrog_37044	41.9	0.000000000014	N/A	unknown function
eggNOG-mapper	UHGV-1402130_27	397290.C810_00402	56.6	0.00000000356	N/A	N/A
PHROG	UHGV-1402130_28	phrog_16304	177.8	0	N/A	unknown function
UniRef90	UHGV-1402130_28	UniRef90_A0A3R6H2J6	479.0	0	N/A	N/A
eggNOG-mapper	UHGV-1402130_28	411490.ANACAC_00800	149.0	2.51001e-41	N/A	N/A
Pfam	UHGV-1402130_28	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1402130_28	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1402130_29	K01160	57.3	4.6e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1402130_29	phrog_1682	71.7	1.1e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1402130_29	UniRef90_A0A415TWS7	292.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1402130_29	910314.HMPREF9220_1104	86.7	4.84e-20	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-1402130_29	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1402130_29	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1402130_30	K07741	48.6	0.00000000000024	antB; anti-repressor protein	N/A
PHROG	UHGV-1402130_30	phrog_463	227.4	0	anti-repressor	transcription regulation
UniRef90	UHGV-1402130_30	UniRef90_A0A3R6DHY3	468.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1402130_30	411490.ANACAC_00813	236.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1402130_30	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1402130_30	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1402130_30	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1402130_30	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1402130_31	phrog_7566	58.0	1.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-1402130_31	1304866.K413DRAFT_3017	59.3	0.000000000487	N/A	N/A
PHROG	UHGV-1402130_32	phrog_1227	232.4	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1402130_32	UniRef90_D4L3P7	490.0	0	N/A	N/A
eggNOG-mapper	UHGV-1402130_32	1304866.K413DRAFT_3016	412.0	0	N/A	N/A
Pfam	UHGV-1402130_32	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-1402130_32	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1402130_32	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-1402130_33	phrog_3657	340.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1402130_33	1304866.K413DRAFT_3015	378.0	0	N/A	N/A
PHROG	UHGV-1402130_34	phrog_1499	298.2	0	N/A	unknown function
UniRef90	UHGV-1402130_34	UniRef90_A0A316M6R3	620.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1402130_34	742733.HMPREF9469_01850	594.0	0	DNA recombination	N/A
PADLOC	UHGV-1402130_34	AAA_15	42.8	0.000000000012	N/A	N/A
COG	UHGV-1402130_34	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-1402130_34	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
UniRef90	UHGV-1402130_38	UniRef90_UPI0015D1C8FF	155.0	0	lectin-1	N/A
structural_annotation	UHGV-1402130_38	COG3296	N/A	N/A	N/A	N/A
PHROG	UHGV-1402130_39	phrog_36464	60.5	3.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-1402130_39	742740.HMPREF9474_03484	62.8	0.00000000000259	N/A	N/A
structural_annotation	UHGV-1402130_39	PF09035	N/A	N/A	N/A	N/A
PHROG	UHGV-1402130_40	phrog_4621	46.6	0.00000000000049	N/A	unknown function
eggNOG-mapper	UHGV-1402130_40	1196322.A370_02090	55.5	0.000000000536	N/A	N/A
UniRef90	UHGV-1402130_44	UniRef90_UPI0015F7B8EC	130.0	2.54e-38	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1402130_44	1321814.HMPREF9089_00909	67.0	0.0000000000000503	Helix-turn-helix domain of resolvase	N/A
structural_annotation	UHGV-1402130_44	PF21291,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1402130_45	K22299	46.1	0.000000000001	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1402130_45	phrog_8	47.6	0.00000000000038	transcriptional regulator	transcription regulation
UniRef90	UHGV-1402130_45	UniRef90_A0A173S886	167.0	0	Transcriptional repressor DicA	N/A
eggNOG-mapper	UHGV-1402130_45	483218.BACPEC_01181	114.0	1.76e-30	Peptidase S24-like	N/A
Pfam	UHGV-1402130_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1402130_45	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1402130_45	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1402130_46	phrog_87	79.9	2.6e-23	metallo-protease	other
UniRef90	UHGV-1402130_46	UniRef90_A0A3R6K8Y6	320.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1402130_46	553973.CLOHYLEM_07298	173.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1402130_46	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1402130_46	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1402130_46	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1402130_47	phrog_215	118.1	3.20001e-41	structural protein with Ig domain	head and packaging
UniRef90	UHGV-1402130_47	UniRef90_A0A349ZUJ4	86.7	0.0000000000000118	Ig-like domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-1402130_47	1410624.JNKK01000014_gene1631	103.0	1.1e-20	Bacterial Ig-like domain (group 2)	N/A
Pfam	UHGV-1402130_47	PF20578	N/A	N/A	Atrophied bacterial Ig domain	aBig_2
Pfam	UHGV-1402130_47	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-1402130_47	COG2304	N/A	N/A	Secreted protein containing bacterial Ig-like domain and vWFA domain	N/A
KOfam	UHGV-1402130_49	K14059	171.2	0	int; integrase	N/A
PHROG	UHGV-1402130_49	phrog_1	157.0	0	integrase	integration and excision
UniRef90	UHGV-1402130_49	UniRef90_D4L3N3	731.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1402130_49	1235790.C805_00008	587.0	0	Phage integrase family	N/A
Pfam	UHGV-1402130_49	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1402130_49	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1402130_49	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1402130	Yes	25,174	41	55	1