Viral OTU vOTU-107033

vOTU: vOTU-107033

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-107033
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00079 → vGENUS-00402 → vOTU-107033
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Gemmiger
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0244875
Biosample ID	SAMN10285319
Length	26,881 bps
CheckV Completeness	65.34% (Medium-quality)
CDS Count	46
CDS Density	89.45%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.34)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0244875_4	TIGR03826	N/A	N/A	N/A	N/A
KOfam	UHGV-0244875_7	K01160	56.9	6.2e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0244875_7	phrog_34	57.1	3e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0244875_7	UniRef90_UPI0018ABA1B6	153.0	1.26117e-44	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0244875_7	875454.BAEW01000002_gene491	108.0	4.85e-28	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0244875_7	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0244875_7	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
KOfam	UHGV-0244875_8	K02314	235.5	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0244875_8	phrog_19	241.0	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0244875_8	UniRef90_UPI000C7E331E	274.0	0	replicative DNA helicase	N/A
eggNOG-mapper	UHGV-0244875_8	665956.HMPREF1032_01442	152.0	1.69e-38	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0244875_8	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0244875_8	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0244875_8	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0244875_8	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0244875_9	phrog_270	104.2	1.7e-30	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0244875_9	742733.HMPREF9469_01845	120.0	3.52e-30	N/A	N/A
structural_annotation	UHGV-0244875_9	PF07106,MF_01177,TIGR01714,COG5529	N/A	N/A	N/A	N/A
KOfam	UHGV-0244875_10	K03111	136.7	2.5e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0244875_10	phrog_44	146.6	1.30321e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0244875_10	UniRef90_A0A1Q6T150	167.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0244875_10	411471.SUBVAR_04646	160.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0244875_10	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0244875_10	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0244875_10	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0244875_10	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0244875_10	PF00436,MF_00984,NF005242,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0244875_11	phrog_7566	81.4	6.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-0244875_11	1507.HMPREF0262_00433	78.2	2.42e-17	N/A	N/A
PHROG	UHGV-0244875_12	phrog_72	44.5	0.00000000000087	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0244875_12	UniRef90_UPI000C7BF263	103.0	1.02e-24	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0244875_12	445972.ANACOL_01825	114.0	9.6e-30	N/A	N/A
structural_annotation	UHGV-0244875_12	PF05772	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0244875_13	1041142.ATTP01000043_gene5324	57.8	0.000000372	N/A	N/A
PHROG	UHGV-0244875_16	phrog_5070	129.1	1.9e-38	N/A	unknown function
UniRef90	UHGV-0244875_16	UniRef90_A0A174CB23	131.0	7.55e-35	Predicted acyltransferase	N/A
eggNOG-mapper	UHGV-0244875_16	478749.BRYFOR_05427	122.0	1.08e-32	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
Pfam	UHGV-0244875_16	PF18836	N/A	N/A	YdcK Beta solenoid repeat	B_solenoid_ydck
COG	UHGV-0244875_16	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
structural_annotation	UHGV-0244875_16	NF040481	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0244875_18	596152.DesU5LDRAFT_1910	92.8	1.31e-20	N/A	N/A
structural_annotation	UHGV-0244875_18	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
UniRef90	UHGV-0244875_19	UniRef90_A0A367GIH6	79.3	2.67e-17	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0244875_19	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0244875_19	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0244875_20	phrog_8	53.4	0.0000000000000065	transcriptional regulator	transcription regulation
UniRef90	UHGV-0244875_20	UniRef90_UPI001C009F10	84.0	5.32e-20	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0244875_20	665950.HMPREF1025_02561	59.7	0.0000000000278	sequence-specific DNA binding	N/A
Pfam	UHGV-0244875_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0244875_20	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0244875_20	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0244875_22	1280664.AUIX01000005_gene2823	56.2	0.000000442	N/A	N/A
KOfam	UHGV-0244875_23	K14059	160.2	0	int; integrase	N/A
PHROG	UHGV-0244875_23	phrog_1	164.9	0	integrase	integration and excision
UniRef90	UHGV-0244875_23	UniRef90_UPI001F166C84	399.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0244875_23	693746.OBV_25530	280.0	0	Phage integrase family	N/A
Pfam	UHGV-0244875_23	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0244875_23	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0244875_23	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0244875_25	1226322.HMPREF1545_00079	67.8	0.000000000000454	N/A	N/A
structural_annotation	UHGV-0244875_26	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0244875_27	phrog_20016	194.4	0	N/A	unknown function
UniRef90	UHGV-0244875_27	UniRef90_A0A285PT46	195.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0244875_27	1226322.HMPREF1545_00077	178.0	0	N/A	N/A
PHROG	UHGV-0244875_28	phrog_16490	164.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0244875_28	1408437.JNJN01000043_gene803	99.0	4e-22	N/A	N/A
PHROG	UHGV-0244875_29	phrog_22984	71.7	3.6e-22	N/A	unknown function
PHROG	UHGV-0244875_30	phrog_21718	111.3	7.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0244875_30	397290.C810_05210	87.8	1.07e-19	N/A	N/A
PHROG	UHGV-0244875_31	phrog_3754	94.7	1e-27	N/A	unknown function
eggNOG-mapper	UHGV-0244875_31	476272.RUMHYD_01764	148.0	1.26117e-44	N/A	N/A
KOfam	UHGV-0244875_32	K07684	42.2	0.000000000014	narL; two-component system, NarL family, nitrate/nitrite response regulator NarL	N/A
Pfam	UHGV-0244875_32	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
COG	UHGV-0244875_32	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
PHROG	UHGV-0244875_33	phrog_13256	54.8	0.0000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0244875_33	1226322.HMPREF1545_00166	56.2	0.0000000013	N/A	N/A
eggNOG-mapper	UHGV-0244875_34	97138.C820_00591	59.7	0.000000000102	N/A	N/A
KOfam	UHGV-0244875_35	K07273	138.6	6.29996e-41	acm; lysozyme	N/A
PHROG	UHGV-0244875_35	phrog_291	105.2	5.7e-31	endolysin	lysis
UniRef90	UHGV-0244875_35	UniRef90_A0A1Q6T343	652.0	0	Peptidase_M23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0244875_35	665956.HMPREF1032_02928	235.0	0	N/A	N/A
Pfam	UHGV-0244875_35	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-0244875_35	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
structural_annotation	UHGV-0244875_35	PF01551,PF01183,NF040883,COG0739,COG3757	N/A	N/A	N/A	N/A
UniRef90	UHGV-0244875_37	UniRef90_UPI0018835F0C	276.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0244875_37	476272.RUMHYD_00002	111.0	2.39e-23	N/A	N/A
eggNOG-mapper	UHGV-0244875_38	411483.FAEPRAA2165_00757	54.3	0.00000267	N/A	N/A
NCBIFam	UHGV-0244875_39	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0244875_39	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0244875_42	phrog_9534	137.4	1.3e-40	head protein	head and packaging
eggNOG-mapper	UHGV-0244875_42	431943.CKL_4054	92.8	7.88e-18	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-0244875_43	phrog_538	108.5	6.1e-32	minor tail protein	tail
UniRef90	UHGV-0244875_43	UniRef90_UPI001C113FEF	228.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0244875_43	665956.HMPREF1032_02940	89.4	3.94e-17	N/A	N/A
Pfam	UHGV-0244875_43	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0244875_43	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0244875_44	phrog_33	56.2	8.3e-16	distal tail protein Dit	tail
UniRef90	UHGV-0244875_44	UniRef90_UPI001C0FCFFA	258.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0244875_44	1033737.CAEV01000029_gene285	93.2	2.61e-19	Phage tail protein	N/A
COG	UHGV-0244875_44	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0244875_44	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0244875_45	phrog_1272	344.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0244875_45	UniRef90_A0A8A6QM79	275.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0244875_45	411483.FAEPRAA2165_01911	362.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0244875_45	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0244875_45	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0244875_45	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0244875_45	PF20155,MF_04138,COG5281	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0244875	Yes	26,881	50	65	1