Viral OTU vOTU-107578

vOTU: vOTU-107578

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-107578
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-00024 → vGENUS-00349 → vOTU-107578
Host Lineage	Bacteria → Firmicutes_A
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0317348
Biosample ID	N/A
Length	23,591 bps
CheckV Completeness	56.47% (Medium-quality)
CDS Count	35
CDS Density	87.64%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 56.47)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0317348_2	K14059	286.0	0	int; integrase	N/A
PHROG	UHGV-0317348_2	phrog_1	242.6	0	integrase	integration and excision
UniRef90	UHGV-0317348_2	UniRef90_C4FP65	666.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-0317348_2	546273.VEIDISOL_00689	666.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0317348_2	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0317348_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0317348_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0317348_2	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0317348_3	phrog_2158	236.2	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0317348_3	UniRef90_UPI00189A9333	554.0	0	Abi family protein	N/A
eggNOG-mapper	UHGV-0317348_3	927704.SELR_16790	305.0	0	Abi-like protein	N/A
PADLOC	UHGV-0317348_3	AbiD	167.6	0	AbiD	Abi
Pfam	UHGV-0317348_3	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-0317348_3	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-0317348_3	PF07751,COG4823	N/A	N/A	N/A	N/A
PHROG	UHGV-0317348_4	phrog_20936	133.3	5.5e-40	N/A	unknown function
UniRef90	UHGV-0317348_4	UniRef90_A0A134BXK6	179.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0317348_4	706434.HMPREF9429_00182	48.5	0.00000298	N/A	N/A
Pfam	UHGV-0317348_4	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-0317348_4	PF06114	N/A	N/A	N/A	N/A
PHROG	UHGV-0317348_5	phrog_2967	62.7	4.8e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0317348_5	UniRef90_C4FP68	232.0	0	Putative toxin-antitoxin system, antitoxin component, Xre family	N/A
eggNOG-mapper	UHGV-0317348_5	546273.VEIDISOL_00692	232.0	0	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0317348_5	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0317348_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0317348_5	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0317348_6	K07729	43.8	0.0000000000052	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-0317348_6	UniRef90_C4FP69	123.0	1.08e-35	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0317348_6	546273.VEIDISOL_00693	123.0	1.8e-36	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0317348_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0317348_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0317348_6	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0317348_13	UniRef90_A0A2S7ZHK6	132.0	3.81e-39	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0317348_13	546273.VEIDISOL_00695	130.0	3.7e-39	Helix-turn-helix domain	N/A
Pfam	UHGV-0317348_13	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-0317348_13	PF12728,NF033787,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-0317348_16	UniRef90_D6KLD9	189.0	0	Surface antigen (D15)	N/A
PHROG	UHGV-0317348_17	phrog_35266	155.5	0	N/A	unknown function
UniRef90	UHGV-0317348_17	UniRef90_UPI001A614D00	185.0	0	choline-binding protein A	N/A
PHROG	UHGV-0317348_18	phrog_29844	227.1	0	N/A	unknown function
PHROG	UHGV-0317348_19	phrog_16315	750.4	0	N/A	unknown function
UniRef90	UHGV-0317348_19	UniRef90_UPI00040F6C65	533.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0317348_19	1401067.HMPREF0872_00420	518.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0317348_19	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0317348_19	PF14284	N/A	N/A	N/A	N/A
KOfam	UHGV-0317348_20	K19171	89.9	2.4e-26	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0317348_20	phrog_77	244.7	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0317348_20	UniRef90_A0A660M765	754.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0317348_20	1401067.HMPREF0872_03485	696.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0317348_20	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0317348_20	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0317348_20	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
KOfam	UHGV-0317348_22	K07741	147.9	1.4013e-43	antB; anti-repressor protein	N/A
PHROG	UHGV-0317348_22	phrog_63	123.2	2.7e-36	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0317348_22	UniRef90_UPI000F8DC23A	317.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0317348_22	883156.HMPREF9282_00923	307.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-0317348_22	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0317348_22	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0317348_22	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0317348_22	PF08346,PF03374,TIGR02681,COG3561,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-0317348_23	phrog_561	153.8	1.4013e-45	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0317348_23	UniRef90_S4U0C4	361.0	0	RecT protein-like protein	N/A
eggNOG-mapper	UHGV-0317348_23	563192.HMPREF0179_00147	210.0	0	N/A	N/A
structural_annotation	UHGV-0317348_23	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0317348_24	K06167	60.8	2.3e-17	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0317348_24	phrog_392	220.2	0	metal-dependent hydrolase	other
UniRef90	UHGV-0317348_24	UniRef90_W1V8U0	440.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-0317348_24	1401067.HMPREF0872_03470	429.0	0	COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I	N/A
Pfam	UHGV-0317348_24	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-0317348_24	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0317348_24	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0317348_25	phrog_29533	244.5	0	N/A	unknown function
UniRef90	UHGV-0317348_25	UniRef90_R5BKQ2	55.8	0.000000851	Conserved domain protein	N/A
PHROG	UHGV-0317348_26	phrog_2562	185.4	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0317348_26	UniRef90_D6KLE8	426.0	0	N/A	N/A
eggNOG-mapper	UHGV-0317348_26	1401067.HMPREF0872_03460	339.0	0	N/A	N/A
Pfam	UHGV-0317348_26	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0317348_26	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0317348_26	PF14297,TIGR01446,TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-0317348_27	K02315	140.1	1.99993e-41	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0317348_27	phrog_50	146.7	1.69557e-43	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0317348_27	UniRef90_A0A096BYG4	349.0	0	DNA replication protein DnaC	N/A
eggNOG-mapper	UHGV-0317348_27	1401067.HMPREF0872_03455	349.0	0	DNA-dependent DNA replication	N/A
Pfam	UHGV-0317348_27	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0317348_27	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0317348_27	PF01695,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0317348_28	phrog_1682	77.9	1.5e-22	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0317348_28	UniRef90_A0A134C0X6	261.0	0	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0317348_28	220668.lp_2433	72.0	0.0000000000000225	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0317348_28	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0317348_28	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0317348_29	phrog_1558	154.8	0	N/A	unknown function
UniRef90	UHGV-0317348_29	UniRef90_UPI0006B5171F	70.9	0.00000000000409	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0317348_29	1401067.HMPREF0872_03430	335.0	0	N/A	N/A
structural_annotation	UHGV-0317348_29	TIGR01637,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0317348_31	K07474	106.9	4.2e-31	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0317348_31	phrog_51	111.6	7.3e-33	terminase small subunit	head and packaging
UniRef90	UHGV-0317348_31	UniRef90_C4FP85	270.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0317348_31	546273.VEIDISOL_00709	270.0	0	terminase, small subunit	N/A
Pfam	UHGV-0317348_31	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0317348_31	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0317348_31	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0317348_32	K06909	403.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0317348_32	phrog_3717	226.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0317348_32	UniRef90_X8H7N8	828.0	0	Terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0317348_32	546273.VEIDISOL_00710	714.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-0317348_32	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0317348_32	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0317348_32	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0317348_32	COG1783	N/A	N/A	Phage terminase large subunit	N/A
HAMAP	UHGV-0317348_32	MF_04145	N/A	N/A	Terminase, large subunit	N/A
structural_annotation	UHGV-0317348_32	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0317348_33	phrog_145	210.9	0	portal protein	head and packaging
UniRef90	UHGV-0317348_33	UniRef90_F9MMJ7	306.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0317348_33	706434.HMPREF9429_00529	549.0	0	N/A	N/A
structural_annotation	UHGV-0317348_33	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0317348_34	phrog_1657	104.9	6.3e-33	head morphogenesis	head and packaging
UniRef90	UHGV-0317348_34	UniRef90_E2ZAR0	337.0	0	Ntox50 domain-containing protein	N/A
eggNOG-mapper	UHGV-0317348_34	706434.HMPREF9429_00528	337.0	0	N/A	N/A
structural_annotation	UHGV-0317348_34	PF04233,TIGR01641	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0317348	Yes	23,591	37	56	1