Viral OTU vOTU-107838

vOTU: vOTU-107838

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-107838
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00226 → vSUBFAM-01870 → vGENUS-02073 → vOTU-107838
Host Lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Paludibacteraceae → RF16
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0001724
Biosample ID	SAMEA4766003
Length	47,206 bps
CheckV Completeness	87.45% (Medium-quality)
CDS Count	76
CDS Density	90.31%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 87.45)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0001724_1	UniRef90_UPI00166C4A22	66.2	0.000000000000916	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0001724_1	1088721.NSU_3108	76.6	3.94e-17	Peptidase M15	N/A
Pfam	UHGV-0001724_1	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0001724_1	COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0001724_2	phrog_1365	43.6	0.0000000000035	N/A	unknown function
eggNOG-mapper	UHGV-0001724_5	679190.HMPREF0650_1967	51.2	0.0000036	N/A	N/A
structural_annotation	UHGV-0001724_8	PF09067	N/A	N/A	N/A	N/A
PHROG	UHGV-0001724_14	phrog_22648	62.0	1.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0001724_14	926559.JoomaDRAFT_2270	105.0	2.34e-26	N/A	N/A
AcrCatalog	UHGV-0001724_14	cluster_67866	78.6	1.71e-20	NA	N/A
structural_annotation	UHGV-0001724_15	PF11320	N/A	N/A	N/A	N/A
PHROG	UHGV-0001724_16	phrog_19846	70.5	4.2039e-45	N/A	unknown function
COG	UHGV-0001724_16	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0001724_16	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0001724_17	1121100.JCM6294_566	62.4	0.000000000777	N/A	N/A
PHROG	UHGV-0001724_18	phrog_64	127.7	7.2e-38	portal protein	head and packaging
UniRef90	UHGV-0001724_18	UniRef90_A0A396MAU4	335.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0001724_18	1268240.ATFI01000008_gene2582	324.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0001724_18	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0001724_18	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0001724_19	UniRef90_A0A3D1KHL6	187.0	0	HTH_7 domain-containing protein	N/A
Pfam	UHGV-0001724_19	PF02796	N/A	N/A	Helix-turn-helix domain of resolvase	HTH_7
KOfam	UHGV-0001724_20	K06909	225.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0001724_20	phrog_2	99.3	6.3e-29	terminase large subunit	head and packaging
UniRef90	UHGV-0001724_20	UniRef90_A0A3D1KJL9	839.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0001724_20	1227266.HMPREF1551_00524	308.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0001724_20	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0001724_20	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0001724_20	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0001724_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0001724_20	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0001724_21	phrog_645	43.4	0.0000000000069	Rnase E	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0001724_21	886379.AEWI01000001_gene1749	59.3	0.0000000904	N/A	N/A
eggNOG-mapper	UHGV-0001724_23	1121100.JCM6294_573	71.2	0.000000000000372	N/A	N/A
Pfam	UHGV-0001724_28	PF20449	N/A	N/A	N/A	DUF6706
structural_annotation	UHGV-0001724_28	PF20449	N/A	N/A	N/A	N/A
PHROG	UHGV-0001724_29	phrog_29	83.0	3.9e-24	major head protein	head and packaging
UniRef90	UHGV-0001724_29	UniRef90_A0A396ME39	181.0	0	Major capsid protein E	N/A
eggNOG-mapper	UHGV-0001724_29	445970.ALIPUT_00704	210.0	0	N/A	N/A
structural_annotation	UHGV-0001724_29	PF03864,MF_04133,NF041162,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0001724_30	phrog_9196	55.0	0.0000000000000013	N/A	unknown function
structural_annotation	UHGV-0001724_30	PF21430,NF009633	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0001724_31	445970.ALIPUT_00706	60.8	0.0000000137	N/A	N/A
PHROG	UHGV-0001724_36	phrog_5149	60.9	2.6e-17	N/A	unknown function
KOfam	UHGV-0001724_45	K03555	47.9	0.00000000000013	mutS; DNA mismatch repair protein MutS	N/A
UniRef90	UHGV-0001724_45	UniRef90_A0A2N5ZIP8	81.3	2.06e-17	DNA mismatch repair protein MutS (Fragment)	N/A
eggNOG-mapper	UHGV-0001724_45	28115.HR11_02835	78.6	0.00000000000000406	that it carries out the mismatch recognition step. This protein has a weak ATPase activity	N/A
Pfam	UHGV-0001724_45	PF01624	N/A	N/A	MutS domain I	MutS_I
COG	UHGV-0001724_45	COG0249	N/A	N/A	DNA mismatch repair ATPase MutS	N/A
KOfam	UHGV-0001724_53	K14056	43.8	0.0000000000036	puuR; HTH-type transcriptional regulator, repressor for puuD	N/A
PHROG	UHGV-0001724_53	phrog_8	40.5	0.000000000055	transcriptional regulator	transcription regulation
UniRef90	UHGV-0001724_53	UniRef90_A0A3D1KG68	207.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0001724_53	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0001724_53	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
Pfam	UHGV-0001724_56	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
UniRef90	UHGV-0001724_57	UniRef90_A0A8B1YWD7	55.5	0.000000477	N/A	N/A
eggNOG-mapper	UHGV-0001724_57	997829.HMPREF1121_01000	57.4	0.0000000167	N/A	N/A
Pfam	UHGV-0001724_57	PF11325	N/A	N/A	N/A	DUF3127
structural_annotation	UHGV-0001724_57	PF11325,MF_00984,NF005579,COG2965	N/A	N/A	N/A	N/A
KOfam	UHGV-0001724_58	K19171	87.3	1.6e-25	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0001724_58	phrog_77	225.6	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0001724_58	UniRef90_C9PZW6	480.0	0	AAA_15 domain-containing protein	N/A
eggNOG-mapper	UHGV-0001724_58	619693.HMPREF6745_2489	480.0	0	AAA domain	N/A
Pfam	UHGV-0001724_58	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0001724_58	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0001724_58	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
KOfam	UHGV-0001724_59	K07455	183.6	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0001724_59	phrog_148	207.5	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0001724_59	UniRef90_A0A3A5SU05	266.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0001724_59	632245.CLP_1611	239.0	0	Recombinational DNA repair protein (RecE pathway)	N/A
Pfam	UHGV-0001724_59	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0001724_59	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0001724_59	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0001724_59	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0001724_60	K06167	49.9	0.000000000000044	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0001724_60	phrog_392	196.5	0	metal-dependent hydrolase	other
UniRef90	UHGV-0001724_60	UniRef90_A0A374AEZ9	272.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-0001724_60	445970.ALIPUT_02692	271.0	0	N/A	N/A
Pfam	UHGV-0001724_60	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
COG	UHGV-0001724_60	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0001724_60	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0001724_61	phrog_6969	52.1	0.0000000000000067	N/A	unknown function
eggNOG-mapper	UHGV-0001724_61	1232446.BAIE02000002_gene816	71.6	0.00000000000656	N/A	N/A
structural_annotation	UHGV-0001724_61	PF01978,MF_01819,TIGR01610,COG5625	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0001724_63	575615.HMPREF0670_00678	55.1	0.00000199	N/A	N/A
PHROG	UHGV-0001724_68	phrog_874	68.4	4.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0001724_68	762968.HMPREF9441_00541	149.0	1.02015e-42	N/A	N/A
structural_annotation	UHGV-0001724_68	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
KOfam	UHGV-0001724_69	K00558	157.0	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0001724_69	phrog_116	166.4	0	DNA methyltransferase	other
UniRef90	UHGV-0001724_69	UniRef90_A0A843DLR8	355.0	0	DNA (Cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0001724_69	1121871.AUAT01000002_gene1371	226.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0001724_69	MTase_II_00174	176.6	0	Type II methyltransferase	RM
Pfam	UHGV-0001724_69	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0001724_69	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0001724_69	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0001724_69	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0001724_70	phrog_17284	57.4	2.1e-16	N/A	unknown function
UniRef90	UHGV-0001724_70	UniRef90_A0A843DPJ2	112.0	3.62e-29	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0001724_70	888049.HMPREF8578_0275	104.0	2.78e-25	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0001724_70	oMTase_00023	49.1	0.00000000000014	orphan methyltransferase	RM
Pfam	UHGV-0001724_70	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0001724_70	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0001724_71	PF10922	N/A	N/A	N/A	N/A
KOfam	UHGV-0001724_74	K00571	182.2	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0001724_74	phrog_67	143.3	9.80909e-45	DNA methyltransferase	other
UniRef90	UHGV-0001724_74	UniRef90_A0A7X6NBV7	252.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0001724_74	1122243.KB903771_gene1539	236.0	0	DNA methylase	N/A
PADLOC	UHGV-0001724_74	MTase_II_00157	163.6	0	Type II methyltransferase	RM
Pfam	UHGV-0001724_74	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0001724_74	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0001724_74	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0001724_76	1347393.HG726022_gene3611	48.1	0.00000999	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0001724	Yes	47,206	42	87	1