Viral OTU vOTU-111467

vOTU: vOTU-111467

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-111467
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00007 → vGENUS-00334 → vOTU-111467
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0249345
Biosample ID	N/A
Length	32,188 bps
CheckV Completeness	55.83% (Medium-quality)
CDS Count	62
CDS Density	80.26%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.83)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0249345_1	UniRef90_A0A2A7AM70	190.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0249345_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0249345_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0249345_1	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0249345_6	phrog_8	44.4	0.0000000000034	transcriptional regulator	transcription regulation
UniRef90	UHGV-0249345_6	UniRef90_UPI001D05D211	72.0	0.000000000000053	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0249345_6	693746.OBV_43290	63.5	0.0000000000326	addiction module antidote protein HigA	N/A
COG	UHGV-0249345_6	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0249345_6	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0249345_7	phrog_1468	40.2	0.000000000038	transcriptional repressor	transcription regulation
UniRef90	UHGV-0249345_7	UniRef90_UPI001956DCC9	72.8	0.00000000000000125	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0249345_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0249345_7	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0249345_8	phrog_518	94.9	7.8e-28	Rha-like transcriptional regulator	transcription regulation
UniRef90	UHGV-0249345_8	UniRef90_UPI0012DF9177	126.0	1.38e-35	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0249345_8	1423775.BAMN01000006_gene1075	114.0	1.4e-29	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0249345_8	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0249345_8	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0249345_8	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0249345_10	PF10922	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249345_11	TIGR03826	N/A	N/A	N/A	N/A
Pfam	UHGV-0249345_14	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0249345_14	PF13443,TIGR02684,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249345_15	PF14143	N/A	N/A	N/A	N/A
PHROG	UHGV-0249345_16	phrog_38771	59.1	6.1e-17	N/A	unknown function
Pfam	UHGV-0249345_17	PF13451	N/A	N/A	Probable zinc-ribbon domain	zf-trcl
COG	UHGV-0249345_17	COG1278	N/A	N/A	Cold shock protein, CspA family	N/A
structural_annotation	UHGV-0249345_17	PF13451	N/A	N/A	N/A	N/A
PHROG	UHGV-0249345_18	phrog_155	149.3	2.24208e-44	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0249345_18	UniRef90_E2ZNS9	272.0	0	Erf family protein	N/A
eggNOG-mapper	UHGV-0249345_18	748224.HMPREF9436_03360	272.0	0	ERF superfamily	N/A
Pfam	UHGV-0249345_18	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0249345_18	PF04404,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-0249345_19	K03111	112.3	7.1e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0249345_19	phrog_44	121.1	1e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0249345_19	UniRef90_A0A6N7TNV3	154.0	1.4013e-45	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0249345_19	748224.HMPREF9436_03359	150.0	1.26117e-44	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0249345_19	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0249345_19	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0249345_19	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0249345_19	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0249345_19	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0249345_20	phrog_28936	124.0	9.7e-37	N/A	unknown function
eggNOG-mapper	UHGV-0249345_20	573061.Clocel_3563	130.0	1.3e-35	N/A	N/A
structural_annotation	UHGV-0249345_20	PF11645,MF_01490,NF040854	N/A	N/A	N/A	N/A
KOfam	UHGV-0249345_21	K00558	158.3	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0249345_21	phrog_116	197.1	0	DNA methyltransferase	other
UniRef90	UHGV-0249345_21	UniRef90_D4JYK0	655.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0249345_21	718252.FP2_16350	655.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0249345_21	oMTase_00004	235.9	0	orphan methyltransferase	RM
Pfam	UHGV-0249345_21	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0249345_21	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0249345_21	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0249345_24	phrog_843	62.2	6.2e-18	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0249345_24	UniRef90_UPI001159D907	113.0	1.55e-28	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-0249345_24	929506.CbC4_1203	106.0	1.65e-26	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
structural_annotation	UHGV-0249345_24	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249345_27	PF20331,COG5264	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249345_28	PF16677	N/A	N/A	N/A	N/A
UniRef90	UHGV-0249345_29	UniRef90_UPI0012DD33A2	250.0	0	restriction endonuclease subunit M	N/A
eggNOG-mapper	UHGV-0249345_29	1121333.JMLH01000037_gene2007	186.0	0	restriction endonuclease	N/A
PADLOC	UHGV-0249345_29	MTase_II_00176	144.9	0	Type II methyltransferase	RM
COG	UHGV-0249345_29	COG1002	N/A	N/A	Type II restriction/modification system, endonuclease and methylase domains	N/A
structural_annotation	UHGV-0249345_39	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0249345_40	phrog_7704	40.3	0.000000000056	N/A	unknown function
UniRef90	UHGV-0249345_40	UniRef90_A0A6G5YDC2	53.9	0.0000000477	N/A	N/A
Pfam	UHGV-0249345_40	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0249345_40	NF041588	N/A	N/A	N/A	N/A
UniRef90	UHGV-0249345_42	UniRef90_Q5YA82	71.6	0.0000000000000148	28	N/A
PHROG	UHGV-0249345_43	phrog_678	43.3	0.0000000000068	replication initiation O-like	DNA, RNA and nucleotide metabolism
Pfam	UHGV-0249345_43	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0249345_43	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0249345_44	K02314	212.3	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0249345_44	phrog_19	225.0	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0249345_44	UniRef90_A0A564SBR1	432.0	0	Replicative DNA helicase	N/A
eggNOG-mapper	UHGV-0249345_44	1203606.HMPREF1526_01325	167.0	2.52234e-44	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0249345_44	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0249345_44	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0249345_44	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0249345_48	phrog_434	45.9	0.00000000000095	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
COG	UHGV-0249345_48	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
PHROG	UHGV-0249345_51	phrog_14275	63.2	3.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0249345_51	1345695.CLSA_c22840	54.3	0.00000187	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-0249345_51	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
COG	UHGV-0249345_51	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0249345_51	PF13157,MF_01537,NF007875,COG3123	N/A	N/A	N/A	N/A
KOfam	UHGV-0249345_53	K07741	42.8	0.000000000015	antB; anti-repressor protein	N/A
PHROG	UHGV-0249345_53	phrog_63	134.3	1e-39	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0249345_53	UniRef90_A0A7Z6MPP3	191.0	0	ANT domain-containing protein	N/A
eggNOG-mapper	UHGV-0249345_53	947981.E9LUT0_9CAUD	184.0	0	DNA binding	N/A
Pfam	UHGV-0249345_53	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0249345_53	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-0249345_53	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
structural_annotation	UHGV-0249345_53	PF09669,PF03374,TIGR02681,COG3646,COG3645	N/A	N/A	N/A	N/A
Pfam	UHGV-0249345_54	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0249345_54	PF01402,NF041284,COG4710	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249345_56	PF20075	N/A	N/A	N/A	N/A
KOfam	UHGV-0249345_57	K14060	129.7	2.8e-38	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0249345_57	phrog_125	158.7	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0249345_57	UniRef90_A0A3D0LYX8	213.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-0249345_57	1410633.JHWR01000012_gene95	194.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0249345_57	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0249345_57	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0249345_57	PF00239,PF02796,MF_00489,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0249345_59	phrog_38	155.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0249345_59	UniRef90_A0A3D4KYF7	963.0	0	DOD-type homing endonuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0249345_59	1232453.BAIF02000058_gene1623	391.0	0	TIGRFAM Phage	N/A
COG	UHGV-0249345_59	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249345_59	PF05203,PF17289,MF_04147,MF_01420,NF033889,NF007072,COG5362,COG1372	N/A	N/A	N/A	N/A
PHROG	UHGV-0249345_61	phrog_64	151.1	5.60519e-45	portal protein	head and packaging
UniRef90	UHGV-0249345_61	UniRef90_A0A371ILT4	333.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0249345_61	1121866.AUGK01000003_gene1429	276.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0249345_61	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0249345_61	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0249345_62	phrog_2657	188.8	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-0249345_62	UniRef90_A0A7X5DZ93	294.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0249345_62	411490.ANACAC_00702	288.0	0	phage regulatory protein, rha family	N/A
Pfam	UHGV-0249345_62	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0249345_62	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0249345_62	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0249345_62	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0249345	Yes	32,188	47	56	1