Viral OTU vOTU-112179

vOTU: vOTU-112179

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-112179
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vOTU-112179
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0209181
Biosample ID	N/A
Length	21,135 bps
CheckV Completeness	50.85% (Medium-quality)
CDS Count	41
CDS Density	88.45%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0209181_1	phrog_2149	73.9	2.9e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209181_1	UniRef90_A0A417QFV0	94.4	2.92e-20	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0209181_1	742740.HMPREF9474_03117	120.0	3.8e-31	N/A	N/A
KOfam	UHGV-0209181_2	K03111	131.8	8e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0209181_2	phrog_44	129.4	2.7e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209181_2	UniRef90_R5SNS5	168.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0209181_2	1519439.JPJG01000082_gene432	173.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0209181_2	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0209181_2	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0209181_2	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0209181_2	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0209181_2	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0209181_3	phrog_7566	85.6	3.6e-25	N/A	unknown function
UniRef90	UHGV-0209181_3	UniRef90_A0A3A5TWB4	53.9	0.000000307	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0209181_3	508419.F8J187_9CAUD	95.1	2.7e-24	N/A	N/A
PHROG	UHGV-0209181_4	phrog_72	71.1	1.1e-20	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209181_4	UniRef90_UPI000C7BF263	174.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0209181_4	445972.ANACOL_01825	137.0	8.92e-39	N/A	N/A
structural_annotation	UHGV-0209181_4	PF05772	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0209181_5	1041142.ATTP01000043_gene5324	56.6	0.00000126	N/A	N/A
structural_annotation	UHGV-0209181_5	TIGR01913	N/A	N/A	N/A	N/A
PHROG	UHGV-0209181_6	phrog_253	84.2	1.6e-24	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209181_6	UniRef90_A0A8D9PDS3	167.0	0	Resistance protein	N/A
eggNOG-mapper	UHGV-0209181_6	411470.RUMGNA_02192	124.0	2.99e-34	Siphovirus Gp157	N/A
Pfam	UHGV-0209181_6	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0209181_6	PF05565	N/A	N/A	N/A	N/A
Pfam	UHGV-0209181_7	PF13248	N/A	N/A	zinc-ribbon domain	zf-ribbon_3
PHROG	UHGV-0209181_8	phrog_22529	94.6	5.8e-28	N/A	unknown function
UniRef90	UHGV-0209181_8	UniRef90_A0A352RPR8	145.0	4.97993e-41	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0209181_8	556261.HMPREF0240_00042	104.0	1.2e-23	NlpC/P60 family	N/A
Pfam	UHGV-0209181_8	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0209181_8	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0209181_8	PF06725,MF_02071,NF040670,COG3584	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0209181_10	397290.C810_01459	55.1	0.00000149	N/A	N/A
structural_annotation	UHGV-0209181_10	TIGR01898,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-0209181_11	phrog_15946	55.8	0.0000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0209181_11	1041147.AUFB01000014_gene330	66.2	0.0000000000142	N/A	N/A
Pfam	UHGV-0209181_12	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0209181_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0209181_12	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0209181_14	UniRef90_A0A3D3Y0G5	88.2	1.98e-19	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0209181_14	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0209181_15	PF03885	N/A	N/A	N/A	N/A
UniRef90	UHGV-0209181_19	UniRef90_R5HRH2	54.3	0.00000111	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0209181_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0209181_19	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0209181_19	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0209181_20	K14059	102.3	7.7e-30	int; integrase	N/A
PHROG	UHGV-0209181_20	phrog_1	118.1	1e-34	integrase	integration and excision
UniRef90	UHGV-0209181_20	UniRef90_UPI001874116E	277.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0209181_20	537013.CLOSTMETH_02492	104.0	2.9e-24	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0209181_20	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0209181_20	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0209181_20	PF00589,MF_01808,TIGR02224,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0209181_21	1232443.BAIA02000078_gene6	63.2	0.0000000000273	N/A	N/A
eggNOG-mapper	UHGV-0209181_22	476272.RUMHYD_01772	59.3	0.00000000512	N/A	N/A
PHROG	UHGV-0209181_23	phrog_20016	183.5	0	N/A	unknown function
UniRef90	UHGV-0209181_23	UniRef90_A0A285PT46	187.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0209181_23	1226322.HMPREF1545_00077	165.0	0	N/A	N/A
structural_annotation	UHGV-0209181_23	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0209181_25	phrog_16490	127.4	1.1e-38	N/A	unknown function
eggNOG-mapper	UHGV-0209181_25	1408437.JNJN01000043_gene803	157.0	9.80909e-45	N/A	N/A
PHROG	UHGV-0209181_26	phrog_22984	67.0	2.1e-19	N/A	unknown function
PHROG	UHGV-0209181_27	phrog_21718	112.5	2.9e-33	N/A	unknown function
eggNOG-mapper	UHGV-0209181_27	397290.C810_05210	68.9	0.00000000000146	N/A	N/A
PHROG	UHGV-0209181_28	phrog_3754	108.8	4.1e-32	N/A	unknown function
eggNOG-mapper	UHGV-0209181_28	1226322.HMPREF1545_00073	164.0	0	N/A	N/A
UniRef90	UHGV-0209181_30	UniRef90_A0A8D9PDQ3	83.2	2.1e-19	ECF sigma factor	N/A
structural_annotation	UHGV-0209181_30	PF04545,MF_00674,NF009179,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0209181_31	K17733	95.9	4e-28	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-0209181_31	phrog_6523	78.4	7.1e-23	endolysin	lysis
UniRef90	UHGV-0209181_31	UniRef90_R5RXG6	222.0	0	Serine-type D-Ala-D-Ala carboxypeptidase	N/A
eggNOG-mapper	UHGV-0209181_31	1519439.JPJG01000023_gene536	212.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-0209181_31	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-0209181_31	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-0209181_31	PF02557,MF_01924,NF000380,COG1876	N/A	N/A	N/A	N/A
PHROG	UHGV-0209181_32	phrog_881	86.9	1.1e-25	holin	lysis
UniRef90	UHGV-0209181_32	UniRef90_A0A317M6V7	85.1	2.57e-20	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-0209181_32	742740.HMPREF9474_02251	78.2	2.65e-18	Putative phage holin Dp-1	N/A
Pfam	UHGV-0209181_32	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0209181_32	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0209181_34	phrog_937	44.5	0.0000000000026	hemolysin	other
eggNOG-mapper	UHGV-0209181_34	1519439.JPJG01000023_gene533	94.7	4.33e-24	N/A	N/A
PHROG	UHGV-0209181_35	phrog_27545	155.2	0	N/A	unknown function
UniRef90	UHGV-0209181_35	UniRef90_A0A2V2GQB6	165.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0209181_35	1519439.JPJG01000060_gene1895	350.0	0	N/A	N/A
Pfam	UHGV-0209181_35	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0209181_35	PF16170	N/A	N/A	N/A	N/A
PHROG	UHGV-0209181_36	phrog_10993	249.3	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-0209181_36	UniRef90_UPI00051B4A1C	311.0	0	N/A	N/A
eggNOG-mapper	UHGV-0209181_36	1519439.JPJG01000060_gene1894	311.0	0	N/A	N/A
Pfam	UHGV-0209181_36	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0209181_36	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0209181_36	PF19789,PF18707,NF041825,COG3330	N/A	N/A	N/A	N/A
KOfam	UHGV-0209181_37	K06236	53.7	0.0000000000000012	COL1A; collagen type I alpha	N/A
PHROG	UHGV-0209181_37	phrog_6320	58.2	1.5e-16	tail fiber protein	tail
UniRef90	UHGV-0209181_37	UniRef90_A0A858MRS5	64.3	0.000000209	Putative tail fiber protein	N/A
eggNOG-mapper	UHGV-0209181_37	1519439.JPJG01000060_gene1892	285.0	0	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0209181_37	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0209181_37	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0209181_39	PF20942,NF041894,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0209181_40	1235797.C816_04179	212.0	0	Chaperone of endosialidase	N/A
structural_annotation	UHGV-0209181_40	PF14594	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0209181	Yes	21,135	53	51	1