Viral OTU vOTU-115029

vOTU: vOTU-115029

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-115029
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00082 → vSUBFAM-00340 → vOTU-115029
Host Lineage	Bacteria → Verrucomicrobiota → Verrucomicrobiae → Verrucomicrobiales → Akkermansiaceae → Akkermansia → Akkermansia muciniphila_B
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0188948
Biosample ID	N/A
Length	23,346 bps
CheckV Completeness	71.53% (Medium-quality)
CDS Count	34
CDS Density	96.35%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 71.53)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0188948_1	phrog_87	96.2	2.2e-28	metallo-protease	other
UniRef90	UHGV-0188948_1	UniRef90_UPI00138E7ED8	348.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0188948_1	717772.THIAE_09635	135.0	7.66e-38	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0188948_1	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0188948_1	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
PHROG	UHGV-0188948_2	phrog_9159	171.6	0	N/A	unknown function
UniRef90	UHGV-0188948_2	UniRef90_UPI001F098A13	671.0	0	beta family protein	N/A
eggNOG-mapper	UHGV-0188948_2	717772.THIAE_09640	149.0	1.6e-38	Beta protein	N/A
PADLOC	UHGV-0188948_2	beta2	137.6	5.90003e-41	N/A	N/A
Pfam	UHGV-0188948_2	PF14350	N/A	N/A	Beta protein	Beta_protein
PHROG	UHGV-0188948_3	phrog_984	101.5	8.9e-30	N/A	unknown function
UniRef90	UHGV-0188948_3	UniRef90_UPI001968B657	424.0	0	sce7726 family protein	N/A
eggNOG-mapper	UHGV-0188948_3	880070.Cycma_4071	56.6	0.000000835	N/A	N/A
PADLOC	UHGV-0188948_3	cll2	80.6	4.8e-23	N/A	N/A
NCBIFam	UHGV-0188948_3	NF033832.1	N/A	N/A	sce7726 family protein	N/A
KOfam	UHGV-0188948_4	K01356	63.5	4.2e-18	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0188948_4	phrog_4	61.0	1.2e-17	transcriptional repressor	transcription regulation
UniRef90	UHGV-0188948_4	UniRef90_UPI00138E6369	417.0	0	S24 family peptidase	N/A
Pfam	UHGV-0188948_4	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0188948_4	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
PHROG	UHGV-0188948_11	phrog_124	168.3	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0188948_11	UniRef90_A0A8F1HRX2	691.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0188948_11	1111454.HMPREF1250_0030	167.0	0	AAA domain	N/A
Pfam	UHGV-0188948_11	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0188948_11	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
UniRef90	UHGV-0188948_12	UniRef90_A0A8F1KYE3	766.0	0	N/A	N/A
eggNOG-mapper	UHGV-0188948_12	1403819.BATR01000122_gene4275	196.0	0	N/A	N/A
Pfam	UHGV-0188948_12	PF10926	N/A	N/A	N/A	DUF2800
PHROG	UHGV-0188948_13	phrog_2698	48.9	0.000000000000092	N/A	unknown function
KOfam	UHGV-0188948_14	K01159	80.4	2.5e-23	ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]	N/A
PHROG	UHGV-0188948_14	phrog_159	123.8	8.2e-37	RuvC-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0188948_14	UniRef90_A0A410S940	292.0	0	Crossover junction endodeoxyribonuclease RuvC	N/A
eggNOG-mapper	UHGV-0188948_14	1996.JOFO01000086_gene367	75.9	0.0000000000000151	N/A	N/A
Pfam	UHGV-0188948_14	PF02075	N/A	N/A	Crossover junction endodeoxyribonuclease RuvC	RuvC
structural_annotation	UHGV-0188948_14	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0188948_16	phrog_799	166.7	0	DNA methyltransferase	other
UniRef90	UHGV-0188948_16	UniRef90_A0A8F1HDK7	424.0	0	Class I SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-0188948_16	1236504.HMPREF2132_11055	176.0	0	DNA restriction-modification system	N/A
COG	UHGV-0188948_16	COG0827	N/A	N/A	Adenine-specific DNA N6-methylase	N/A
KOfam	UHGV-0188948_17	K06223	221.5	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0188948_17	phrog_56	170.5	0	DNA methyltransferase	other
UniRef90	UHGV-0188948_17	UniRef90_A0A2N8HC06	525.0	0	DNA methyltransferase	N/A
eggNOG-mapper	UHGV-0188948_17	520999.PROVALCAL_00744	238.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0188948_17	MTase_II_00030	205.9	0	Type II methyltransferase	RM
Pfam	UHGV-0188948_17	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-0188948_17	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-0188948_17	PF02086,MF_00934,TIGR00571,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0188948_18	phrog_2509	159.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0188948_18	UniRef90_A0A2N8IQI9	285.0	0	Pyocin large subunit	N/A
eggNOG-mapper	UHGV-0188948_18	1327941.T1S9H2_9CAUD	107.0	4.19e-25	N/A	N/A
structural_annotation	UHGV-0188948_18	PF17948,PF09681,MF_01061,NF002770,TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-0188948_19	K02314	385.8	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0188948_19	phrog_19	283.0	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0188948_19	UniRef90_A0A8F1KFQ8	827.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0188948_19	349741.Amuc_1377	418.0	0	DnaB-like helicase C terminal domain	N/A
Pfam	UHGV-0188948_19	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0188948_19	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0188948_19	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0188948_19	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-0188948_21	K11044	52.5	0.0000000000000032	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	N/A
UniRef90	UHGV-0188948_21	UniRef90_A0A4Q5IVQ1	921.0	0	ADPrib_exo_Tox domain-containing protein	N/A
eggNOG-mapper	UHGV-0188948_21	563192.HMPREF0179_00384	102.0	4.55e-20	Phage Mu protein F like protein	N/A
Pfam	UHGV-0188948_21	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-0188948_21	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0188948_23	phrog_1482	123.1	1.1e-36	terminase small subunit	head and packaging
UniRef90	UHGV-0188948_23	UniRef90_A0A8I0N2P9	95.1	9.64e-22	Terminase small subunit protein	N/A
eggNOG-mapper	UHGV-0188948_23	521000.PROVRETT_06006	91.3	3.09e-21	N/A	N/A
Pfam	UHGV-0188948_23	PF20901	N/A	N/A	Bacteriophage Sf6, terminase small subunit-like	Sf6_terminase
PHROG	UHGV-0188948_24	phrog_2	84.3	1.3e-24	terminase large subunit	head and packaging
UniRef90	UHGV-0188948_24	UniRef90_A0A1C7PDG0	352.0	0	p-loop containing nucleoside triphosphate hydrolase	N/A
eggNOG-mapper	UHGV-0188948_24	411459.RUMOBE_01049	70.9	0.000000000345	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD	N/A
COG	UHGV-0188948_24	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0188948_24	PF04466,PF20441,MF_04145,TIGR01547,COG4373	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0188948_25	PF05587,PF03388,COG3506	N/A	N/A	N/A	N/A
UniRef90	UHGV-0188948_27	UniRef90_UPI001EDF593B	190.0	0	N/A	N/A
PHROG	UHGV-0188948_29	phrog_17001	160.9	0	endolysin	lysis
UniRef90	UHGV-0188948_29	UniRef90_A0A2N8I2C3	390.0	0	Peptidase_M15_4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0188948_29	349741.Amuc_1996	173.0	0	Peptidoglycan-binding domain 1 protein	N/A
Pfam	UHGV-0188948_29	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-0188948_29	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
KOfam	UHGV-0188948_30	K07726	68.8	1.1e-19	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-0188948_30	phrog_2104	71.2	1.2e-20	N/A	unknown function
UniRef90	UHGV-0188948_30	UniRef90_A0A857ZWB2	278.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0188948_30	349741.Amuc_1361	103.0	3.14e-26	sequence-specific DNA binding	N/A
Pfam	UHGV-0188948_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0188948_30	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
UniRef90	UHGV-0188948_31	UniRef90_A0A2N8I2C4	119.0	3.75e-34	Type II toxin-antitoxin system HicA family toxin	N/A
eggNOG-mapper	UHGV-0188948_31	449447.MAE_44090	56.6	0.000000000715	PFAM YcfA-like protein	N/A
COG	UHGV-0188948_31	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
PHROG	UHGV-0188948_33	phrog_8999	45.5	0.00000000000087	N/A	unknown function

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0188948	Yes	23,346	51	72	1