Viral OTU vOTU-116428

vOTU: vOTU-116428

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-116428
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00049 → vOTU-116428
Host Lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_B → Enterococcus_B faecium
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1534799
Biosample ID	SAMEA3664979
Length	30,461 bps
CheckV Completeness	83.56% (Medium-quality)
CDS Count	38
CDS Density	85.95%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 83.56)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1534799_1	phrog_822	104.2	1e-30	amidase	lysis
UniRef90	UHGV-1534799_1	UniRef90_D6D505	242.0	0	Negative regulator of beta-lactamase expression	N/A
eggNOG-mapper	UHGV-1534799_1	657309.BXY_45280	242.0	0	N/A	N/A
Pfam	UHGV-1534799_1	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1534799_1	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
eggNOG-mapper	UHGV-1534799_5	762903.Pedsa_0939	89.4	0.00000000000000203	Phage minor structural protein	N/A
COG	UHGV-1534799_5	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1534799_6	phrog_30639	48.9	0.000000000000057	N/A	unknown function
eggNOG-mapper	UHGV-1534799_6	1236514.BAKL01000051_gene3689	408.0	0	N/A	N/A
structural_annotation	UHGV-1534799_6	PF14594,TIGR03361,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-1534799_7	UniRef90_A0A412I9W4	79.3	0.0000000000000667	Phage tail tape measure protein (Fragment)	N/A
eggNOG-mapper	UHGV-1534799_7	1347393.HG726020_gene887	172.0	0	N/A	N/A
eggNOG-mapper	UHGV-1534799_8	1236514.BAKL01000051_gene3690	161.0	2.69049e-42	tape measure	N/A
COG	UHGV-1534799_8	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
eggNOG-mapper	UHGV-1534799_10	1347393.HG726020_gene889	69.7	0.000000000000035	N/A	N/A
structural_annotation	UHGV-1534799_10	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1534799_11	phrog_1407	92.6	3.2e-27	major tail protein	tail
UniRef90	UHGV-1534799_11	UniRef90_UPI00101D4FB2	231.0	0	phage tail tube protein	N/A
eggNOG-mapper	UHGV-1534799_11	908937.Prede_1348	90.9	3.75e-21	Phage tail tube protein	N/A
Pfam	UHGV-1534799_11	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
structural_annotation	UHGV-1534799_11	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1534799_12	UniRef90_UPI00101D5124	237.0	0	N/A	N/A
eggNOG-mapper	UHGV-1534799_12	1347393.HG726020_gene891	117.0	3.05e-32	N/A	N/A
Pfam	UHGV-1534799_12	PF11367	N/A	N/A	N/A	DUF3168
structural_annotation	UHGV-1534799_12	PF11367,COG5003	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1534799_13	1347393.HG726020_gene892	114.0	1.97e-30	N/A	N/A
structural_annotation	UHGV-1534799_13	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1534799_14	phrog_25	47.3	0.00000000000033	head closure Hc1	connector
UniRef90	UHGV-1534799_14	UniRef90_UPI00189F9079	173.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1534799_14	908937.Prede_1351	87.8	3.42e-21	Phage head-tail joining protein	N/A
Pfam	UHGV-1534799_14	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1534799_14	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1534799_14	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1534799_15	phrog_40	58.5	9.4e-17	head-tail adaptor Ad1	connector
UniRef90	UHGV-1534799_15	UniRef90_UPI00101CDB75	176.0	0	head-tail connector protein	N/A
eggNOG-mapper	UHGV-1534799_15	1347393.HG726020_gene894	88.6	1.43e-21	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1534799_15	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-1534799_15	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1534799_15	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1534799_16	phrog_617	168.9	0	major head protein	head and packaging
UniRef90	UHGV-1534799_16	UniRef90_UPI00189F81E4	714.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1534799_16	1122931.AUAE01000036_gene1069	356.0	0	Phage capsid family	N/A
Pfam	UHGV-1534799_16	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1534799_16	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1534799_16	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1534799_16	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1534799_17	K06904	124.0	1.6e-36	N/A	N/A
PHROG	UHGV-1534799_17	phrog_80	136.1	3.5e-40	head maturation protease	head and packaging
UniRef90	UHGV-1534799_17	UniRef90_UPI00189E0860	335.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1534799_17	1236517.BAKO01000013_gene1443	177.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1534799_17	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1534799_17	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1534799_17	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1534799_17	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
Pfam	UHGV-1534799_19	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
structural_annotation	UHGV-1534799_19	PF03382	N/A	N/A	N/A	N/A
PHROG	UHGV-1534799_20	phrog_5004	43.4	2.7e-39	N/A	unknown function
PHROG	UHGV-1534799_21	phrog_12	306.1	0	portal protein	head and packaging
UniRef90	UHGV-1534799_21	UniRef90_UPI00101B9DC9	718.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1534799_21	908937.Prede_1355	325.0	0	Phage portal protein	N/A
Pfam	UHGV-1534799_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1534799_21	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1534799_21	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1534799_21	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1534799_22	phrog_9	358.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1534799_22	UniRef90_UPI00101B7D85	1016.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1534799_22	1347393.HG726026_gene2611	529.0	0	Phage Terminase	N/A
Pfam	UHGV-1534799_22	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1534799_22	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1534799_22	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1534799_22	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1534799_24	phrog_83	66.3	2.4e-19	terminase small subunit	head and packaging
UniRef90	UHGV-1534799_24	UniRef90_UPI00101D05F5	264.0	0	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1534799_24	908937.Prede_1357	70.5	0.0000000000000928	Phage terminase, small subunit	N/A
Pfam	UHGV-1534799_24	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1534799_24	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1534799_24	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1534799_27	PF12187,NF002581	N/A	N/A	N/A	N/A
PHROG	UHGV-1534799_28	phrog_119	62.0	8.5e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1534799_28	UniRef90_UPI00101C7BD6	201.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1534799_28	1268240.ATFI01000007_gene425	94.4	7.84e-24	HNH endonuclease	N/A
Pfam	UHGV-1534799_28	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1534799_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-1534799_31	K06400	206.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1534799_31	phrog_95	191.8	0	integrase	integration and excision
UniRef90	UHGV-1534799_31	UniRef90_A0A1C5MQY5	981.0	0	Resolvase, N terminal domain	N/A
eggNOG-mapper	UHGV-1534799_31	585543.HMPREF0969_03537	267.0	0	Recombinase	N/A
Pfam	UHGV-1534799_31	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1534799_31	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1534799_31	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
eggNOG-mapper	UHGV-1534799_33	657309.BXY_45270	179.0	0	N/A	N/A
UniRef90	UHGV-1534799_34	UniRef90_D6D503	300.0	0	DNA-binding protein, histone-like, putative	N/A
eggNOG-mapper	UHGV-1534799_34	657309.BXY_45260	300.0	0	DNA-binding protein	N/A
Pfam	UHGV-1534799_34	PF18291	N/A	N/A	HU domain fused to wHTH, Ig, or Glycine-rich motif	HU-HIG
NCBIFam	UHGV-1534799_34	TIGR01201.1	N/A	N/A	HU family DNA-binding protein	N/A
COG	UHGV-1534799_34	COG0776	N/A	N/A	Bacterial nucleoid DNA-binding protein IHF-alpha	N/A
structural_annotation	UHGV-1534799_34	PF18291,MF_00380,TIGR01201,COG0776	N/A	N/A	N/A	N/A
KOfam	UHGV-1534799_35	K02314	452.0	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1534799_35	phrog_19	318.5	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1534799_35	UniRef90_A0A139LM66	843.0	0	Replicative DNA helicase	N/A
eggNOG-mapper	UHGV-1534799_35	411476.BACOVA_04243	884.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-1534799_35	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1534799_35	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
NCBIFam	UHGV-1534799_35	TIGR00665.1	N/A	N/A	replicative DNA helicase	N/A
COG	UHGV-1534799_35	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1534799_35	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
UniRef90	UHGV-1534799_36	UniRef90_A0A081UHK5	159.0	1.4013e-45	C2H2-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1534799_36	411476.BACOVA_04242	423.0	0	N/A	N/A
UniRef90	UHGV-1534799_37	UniRef90_A0A174BNX7	181.0	0	N/A	N/A
eggNOG-mapper	UHGV-1534799_37	411476.BACOVA_04239	181.0	0	N/A	N/A
Pfam	UHGV-1534799_37	PF14053	N/A	N/A	N/A	DUF4248
KOfam	UHGV-1534799_38	K04763	96.0	5e-28	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1534799_38	phrog_1	115.2	7.4e-34	integrase	integration and excision
UniRef90	UHGV-1534799_38	UniRef90_R6DJ42	486.0	0	Site-specific recombinase phage integrase family	N/A
eggNOG-mapper	UHGV-1534799_38	411476.BACOVA_04238	610.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1534799_38	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-1534799_38	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1534799_38	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1534799_38	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1534799	Yes	30,461	34	84	1