Viral OTU vOTU-116889

vOTU: vOTU-116889

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-116889
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00197 → vOTU-116889
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminococcus_C → Ruminococcus_C sp000433635
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0138603
Biosample ID	N/A
Length	26,112 bps
CheckV Completeness	70.07% (Medium-quality)
CDS Count	37
CDS Density	94.26%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 70.07)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0138603_1	UniRef90_UPI001ADD903E	155.0	1.4013e-45	PD-(D/E)XK nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0138603_1	411473.RUMCAL_03147	270.0	0	PD-(D/E)XK nuclease superfamily	N/A
Pfam	UHGV-0138603_1	PF08011	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_9
COG	UHGV-0138603_1	COG1672	N/A	N/A	Predicted ATPase, archaeal AAA+ ATPase superfamily	N/A
KOfam	UHGV-0138603_2	K07459	80.0	2.4e-23	ybjD; putative ATP-dependent endonuclease of the OLD family	N/A
PHROG	UHGV-0138603_2	phrog_14430	133.2	3.09999e-40	N/A	unknown function
UniRef90	UHGV-0138603_2	UniRef90_E9S9L4	318.0	0	AAA_15 domain-containing protein	N/A
eggNOG-mapper	UHGV-0138603_2	246199.CUS_4635	318.0	0	AAA ATPase domain	N/A
PADLOC	UHGV-0138603_2	AAA_21	59.4	6.3e-17	N/A	N/A
Pfam	UHGV-0138603_2	PF13175	N/A	N/A	AAA ATPase domain	AAA_15
COG	UHGV-0138603_2	COG3950	N/A	N/A	Predicted ATP-binding protein involved in virulence	N/A
structural_annotation	UHGV-0138603_2	PF11398,MF_00365,NF041760,COG4938	N/A	N/A	N/A	N/A
UniRef90	UHGV-0138603_3	UniRef90_UPI000CEEBD24	84.0	1.33e-16	geranyl transferase	N/A
eggNOG-mapper	UHGV-0138603_3	622312.ROSEINA2194_00320	97.8	1.31e-22	N/A	N/A
KOfam	UHGV-0138603_4	K07273	171.0	0	acm; lysozyme	N/A
PHROG	UHGV-0138603_4	phrog_291	125.1	6.2e-37	endolysin	lysis
UniRef90	UHGV-0138603_4	UniRef90_A0A349YST6	541.0	0	Peptidase_M15_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0138603_4	411473.RUMCAL_01945	483.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0138603_4	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
Pfam	UHGV-0138603_4	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0138603_4	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0138603_4	PF01183,PF08291,NF007557,COG3757,COG3108	N/A	N/A	N/A	N/A
UniRef90	UHGV-0138603_6	UniRef90_A0A6N2ZL57	93.2	1.18e-23	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0138603_6	1304866.K413DRAFT_0788	77.0	4.68e-18	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0138603_6	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0138603_6	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_7	phrog_443	56.6	8.1e-16	holin	lysis
UniRef90	UHGV-0138603_7	UniRef90_R6R2Q3	94.4	3.64e-24	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0138603_7	1298920.KI911353_gene2669	81.3	9.63e-20	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0138603_7	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0138603_7	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_8	phrog_4105	82.8	3.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-0138603_8	592026.GCWU0000282_003290	77.8	3.12e-17	N/A	N/A
structural_annotation	UHGV-0138603_9	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_10	phrog_35590	280.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0138603_10	411473.RUMCAL_00613	117.0	5.21e-28	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0138603_10	COG2931	N/A	N/A	Ca2+-binding protein, RTX toxin-related	N/A
structural_annotation	UHGV-0138603_10	PF07675,NF038128	N/A	N/A	N/A	N/A
KOfam	UHGV-0138603_11	K24355	66.1	3.1e-19	COL23A; collagen type XXIII alpha	N/A
PHROG	UHGV-0138603_11	phrog_25888	144.4	0	N/A	unknown function
UniRef90	UHGV-0138603_11	UniRef90_U2KR58	228.0	0	Collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0138603_11	411473.RUMCAL_01941	228.0	0	cell adhesion	N/A
Pfam	UHGV-0138603_11	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0138603_11	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
structural_annotation	UHGV-0138603_11	PF10651,COG3470	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0138603_12	PF14594,TIGR03361,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0138603_13	PF05939,TIGR01633,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_14	phrog_5218	258.2	0	N/A	unknown function
UniRef90	UHGV-0138603_14	UniRef90_A0A3D5KWG5	1762.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0138603_14	1235792.C808_03050	231.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0138603_14	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0138603_14	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0138603_14	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_15	phrog_706	137.2	9.99995e-41	N/A	unknown function
UniRef90	UHGV-0138603_15	UniRef90_A6BEQ8	137.0	1.97e-37	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0138603_15	411462.DORLON_00779	137.0	3.3e-38	COG NOG24969 non supervised orthologous group	N/A
Pfam	UHGV-0138603_15	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0138603_15	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_16	phrog_4450	64.0	2.9e-18	N/A	unknown function
UniRef90	UHGV-0138603_16	UniRef90_A0A413QHF8	54.7	0.00000052	AP endonuclease	N/A
eggNOG-mapper	UHGV-0138603_16	641112.ACOK01000073_gene2902	81.6	3.01e-18	N/A	N/A
Pfam	UHGV-0138603_16	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0138603_16	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_17	phrog_3099	133.5	1.2e-39	N/A	unknown function
eggNOG-mapper	UHGV-0138603_17	411473.RUMCAL_01935	140.0	6.77e-39	N/A	N/A
PHROG	UHGV-0138603_18	phrog_3266	143.2	8.09951e-43	tail completion	connector
UniRef90	UHGV-0138603_18	UniRef90_A0A3C0IHV8	291.0	0	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0138603_18	573061.Clocel_3537	128.0	4.2e-36	N/A	N/A
structural_annotation	UHGV-0138603_18	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_19	phrog_556	105.4	3.7e-31	minor head protein	head and packaging
UniRef90	UHGV-0138603_19	UniRef90_A0A352TI11	186.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0138603_19	641112.ACOK01000073_gene2898	75.1	5.2e-16	Minor capsid protein	N/A
Pfam	UHGV-0138603_19	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0138603_19	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_20	phrog_3366	51.3	0.0000000000000037	N/A	unknown function
eggNOG-mapper	UHGV-0138603_20	411473.RUMCAL_01932	79.7	8.72e-18	N/A	N/A
Pfam	UHGV-0138603_20	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0138603_20	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_21	phrog_541	89.7	2.7e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0138603_21	641112.ACOK01000073_gene2896	85.1	2.63e-19	N/A	N/A
PHROG	UHGV-0138603_22	phrog_422	236.9	0	major head protein	head and packaging
UniRef90	UHGV-0138603_22	UniRef90_W0U896	291.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0138603_22	641112.ACOK01000073_gene2894	301.0	0	N/A	N/A
structural_annotation	UHGV-0138603_22	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_23	phrog_194	51.4	0.000000000000023	head scaffolding protein	head and packaging
UniRef90	UHGV-0138603_23	UniRef90_A0A174LGM6	68.2	0.000000000064	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0138603_23	641112.ACOK01000073_gene2893	142.0	1.4e-40	Phage minor structural protein GP20	N/A
structural_annotation	UHGV-0138603_23	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_26	phrog_581	304.0	0	minor head protein	head and packaging
UniRef90	UHGV-0138603_26	UniRef90_U2K8C2	483.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0138603_26	411473.RUMCAL_01925	483.0	0	N/A	N/A
Pfam	UHGV-0138603_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0138603_26	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0138603_26	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_27	phrog_533	290.5	0	portal protein	head and packaging
UniRef90	UHGV-0138603_27	UniRef90_UPI001C1263AE	292.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0138603_27	641112.ACOK01000073_gene2889	288.0	0	N/A	N/A
Pfam	UHGV-0138603_27	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0138603_27	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0138603_28	K06909	147.1	1.59748e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0138603_28	phrog_2	148.2	8.40779e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0138603_28	UniRef90_A0A315Y4A8	486.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0138603_28	641112.ACOK01000073_gene2888	517.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0138603_28	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0138603_28	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0138603_28	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0138603_28	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_29	phrog_2412	56.4	4e-18	N/A	unknown function
UniRef90	UHGV-0138603_29	UniRef90_UPI000C7D5747	56.2	0.000000202	stress-induced protein	N/A
eggNOG-mapper	UHGV-0138603_29	173707.Q938L4_9CAUD	50.8	0.0000042	N/A	N/A
PHROG	UHGV-0138603_30	phrog_36	74.4	2e-21	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0138603_30	PF04545,MF_00674,TIGR02980,COG1595	N/A	N/A	N/A	N/A
PHROG	UHGV-0138603_32	phrog_2245	74.1	2.2e-21	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0138603_32	UniRef90_A0A8G1WT09	52.0	0.00000128	MazG domain-containing protein	N/A
structural_annotation	UHGV-0138603_32	PF10400,MF_01019,NF010671,COG0140	N/A	N/A	N/A	N/A
KOfam	UHGV-0138603_36	K00390	67.2	1.7e-19	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0138603_36	phrog_424	149.1	2.66247e-44	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0138603_36	UniRef90_A0A1H7KWC5	557.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	N/A
eggNOG-mapper	UHGV-0138603_36	537013.CLOSTMETH_01340	315.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0138603_36	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0138603_36	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0138603_36	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0138603	Yes	26,112	44	70	1