Viral OTU vOTU-119620

vOTU: vOTU-119620

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-119620
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00439 → vGENUS-17088 → vOTU-119620
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → COE1
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0054536
Biosample ID	N/A
Length	31,629 bps
CheckV Completeness	52.53% (Medium-quality)
CDS Count	50
CDS Density	84.66%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 52.53)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0054536_1	K03091	248.9	0	sigH; RNA polymerase sporulation-specific sigma factor	N/A
PHROG	UHGV-0054536_1	phrog_351	130.2	1.70006e-41	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-0054536_1	UniRef90_R7R3J2	466.0	0	RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0054536_1	397291.C804_01252	381.0	0	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	N/A
PADLOC	UHGV-0054536_1	MzaA_00001	47.3	6.2e-18	NA	mzaABCDE
Pfam	UHGV-0054536_1	PF04542	N/A	N/A	Sigma-70 region 2	Sigma70_r2
Pfam	UHGV-0054536_1	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
NCBIFam	UHGV-0054536_1	NF006158.0	N/A	N/A	RNA polymerase sporulation sigma factor SigE	N/A
COG	UHGV-0054536_1	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0054536_1	PF04542,MF_00961,NF006158,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-0054536_2	K03091	107.8	1.6e-31	sigH; RNA polymerase sporulation-specific sigma factor	N/A
PHROG	UHGV-0054536_2	phrog_351	96.1	4.6e-28	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-0054536_2	UniRef90_A0A351TN53	161.0	0	RNA polymerase sigma-G factor (Fragment)	N/A
eggNOG-mapper	UHGV-0054536_2	1235793.C809_00849	181.0	0	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	N/A
PADLOC	UHGV-0054536_2	MzaA_00001	44.0	0.000000000003	NA	mzaABCDE
Pfam	UHGV-0054536_2	PF04542	N/A	N/A	Sigma-70 region 2	Sigma70_r2
NCBIFam	UHGV-0054536_2	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0054536_2	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0054536_2	PF04542,MF_04164,TIGR02846	N/A	N/A	N/A	N/A
PHROG	UHGV-0054536_4	phrog_21718	40.9	0.00000000003	N/A	unknown function
eggNOG-mapper	UHGV-0054536_4	658655.HMPREF0988_00919	105.0	1.69e-26	N/A	N/A
eggNOG-mapper	UHGV-0054536_5	658655.HMPREF0988_00918	87.4	8.49e-22	N/A	N/A
PHROG	UHGV-0054536_6	phrog_16490	194.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0054536_6	397290.C810_01328	195.0	0	N/A	N/A
PHROG	UHGV-0054536_7	phrog_20016	214.3	0	N/A	unknown function
UniRef90	UHGV-0054536_7	UniRef90_A0A285PT46	159.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0054536_7	397290.C810_05214	217.0	0	N/A	N/A
structural_annotation	UHGV-0054536_7	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0054536_8	658655.HMPREF0988_00915	110.0	7.09e-27	N/A	N/A
eggNOG-mapper	UHGV-0054536_9	397290.C810_01336	131.0	2.53e-38	N/A	N/A
structural_annotation	UHGV-0054536_9	PF20352,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0054536_14	phrog_31631	76.4	2.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0054536_18	1121342.AUCO01000003_gene1501	60.5	0.000000146	N/A	N/A
PADLOC	UHGV-0054536_18	mkCas0106	43.5	2e-20	CAS-I-B; effector_LS	CRISPR-CAS
UniRef90	UHGV-0054536_20	UniRef90_A0A8D9UIS5	70.1	0.0000000000378	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0054536_20	397290.C810_01353	210.0	0	N/A	N/A
KOfam	UHGV-0054536_21	K07451	50.5	0.000000000000037	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0054536_21	phrog_589	55.9	8.6e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0054536_21	UniRef90_T3DQP5	119.0	8.17e-30	HNH endonuclease family protein	N/A
eggNOG-mapper	UHGV-0054536_21	756883.Halar_3598	55.1	0.000000603	COG1403 Restriction endonuclease	N/A
Pfam	UHGV-0054536_21	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0054536_21	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0054536_21	PF14279	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0054536_24	PF04466	N/A	N/A	N/A	N/A
UniRef90	UHGV-0054536_25	UniRef90_A0A8D9PG29	143.0	5.32493e-43	Acetyl-coA carboxylase zinc finger domain protein	N/A
KOfam	UHGV-0054536_28	K03744	153.1	2.8026e-45	lemA; LemA protein	N/A
PHROG	UHGV-0054536_28	phrog_1383	160.8	0	virion structural protein	head and packaging
UniRef90	UHGV-0054536_28	UniRef90_A0A3A8ZXF9	295.0	0	LemA family protein	N/A
eggNOG-mapper	UHGV-0054536_28	742735.HMPREF9467_00879	294.0	0	LemA family	N/A
Pfam	UHGV-0054536_28	PF04011	N/A	N/A	LemA family	LemA
COG	UHGV-0054536_28	COG1704	N/A	N/A	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	N/A
structural_annotation	UHGV-0054536_28	PF04011,NF040966,COG1704	N/A	N/A	N/A	N/A
PHROG	UHGV-0054536_29	phrog_3886	265.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0054536_29	742735.HMPREF9467_00880	271.0	0	N/A	N/A
UniRef90	UHGV-0054536_31	UniRef90_UPI0011072322	73.2	0.000000000000023	N/A	N/A
eggNOG-mapper	UHGV-0054536_31	1256908.HMPREF0373_00479	68.9	0.000000000000161	N/A	N/A
structural_annotation	UHGV-0054536_31	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0054536_32	phrog_38	157.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0054536_32	UniRef90_UPI001D009E65	1042.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0054536_32	1121866.AUGK01000003_gene1428	233.0	0	chromosome segregation	N/A
NCBIFam	UHGV-0054536_32	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0054536_32	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0054536_32	PF17289,PF05876,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0054536_33	phrog_36	74.0	2.7e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0054536_33	UniRef90_A0A352SH29	110.0	6.17e-29	RNA polymerase subunit sigma-70 (Fragment)	N/A
eggNOG-mapper	UHGV-0054536_33	97138.C820_00221	80.9	1.65e-17	sigma factor activity	N/A
COG	UHGV-0054536_33	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0054536_33	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0054536_34	phrog_64	178.3	0	portal protein	head and packaging
UniRef90	UHGV-0054536_34	UniRef90_R6CA99	778.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-0054536_34	1298920.KI911353_gene2663	454.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0054536_34	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0054536_34	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0054536_35	UniRef90_R6C0B6	145.0	6.34998e-41	Phage capsid scaffolding protein	N/A
PHROG	UHGV-0054536_36	phrog_909	70.5	2.4e-20	major head protein	head and packaging
UniRef90	UHGV-0054536_36	UniRef90_R7BGI8	154.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0054536_36	1497679.EP56_02915	57.0	0.00000000449	N/A	N/A
PHROG	UHGV-0054536_37	phrog_29	160.9	0	major head protein	head and packaging
UniRef90	UHGV-0054536_37	UniRef90_A0A173UF26	690.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-0054536_37	1118054.CAGW01000102_gene4700	165.0	1.4013e-45	Phage major capsid protein E	N/A
Pfam	UHGV-0054536_37	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0054536_37	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0054536_38	UniRef90_A0A416G2T8	62.0	0.0000000000617	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-0054536_38	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-0054536_40	phrog_1863	52.9	0.0000000000000037	N/A	unknown function
eggNOG-mapper	UHGV-0054536_40	742741.HMPREF9475_00442	53.9	0.000000061	N/A	N/A
PHROG	UHGV-0054536_41	phrog_1129	74.8	8.3e-22	holin	lysis
UniRef90	UHGV-0054536_41	UniRef90_A0A8D9UII9	143.0	5.60519e-43	Holin	N/A
eggNOG-mapper	UHGV-0054536_41	411461.DORFOR_00721	99.8	2.11e-26	N/A	N/A
Pfam	UHGV-0054536_41	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0054536_41	PF06946	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0054536_42	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0054536_43	phrog_1233	81.6	1.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0054536_43	357809.Cphy_2967	80.1	5.86e-18	N/A	N/A
PHROG	UHGV-0054536_44	phrog_5	42.6	0.000000000012	tail completion or Neck1 protein	connector
UniRef90	UHGV-0054536_44	UniRef90_UPI001BBD4500	152.0	4.06377e-44	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0054536_44	397290.C810_01411	196.0	0	N/A	N/A
structural_annotation	UHGV-0054536_44	PF17395,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0054536_45	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0054536_46	476272.RUMHYD_01968	185.0	0	N/A	N/A
structural_annotation	UHGV-0054536_46	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
KOfam	UHGV-0054536_49	K07273	181.1	0	acm; lysozyme	N/A
PHROG	UHGV-0054536_49	phrog_291	152.0	5.60519e-45	endolysin	lysis
UniRef90	UHGV-0054536_49	UniRef90_UPI001D05F2B6	378.0	0	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-0054536_49	1235800.C819_00458	218.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0054536_49	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0054536_49	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0054536_49	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0054536_49	PF01183,PF01471,MF_02227,NF007360,COG3757,COG3409	N/A	N/A	N/A	N/A
KOfam	UHGV-0054536_50	K10421	44.8	0.00000000000083	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0054536_50	phrog_1535	235.6	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0054536_50	411902.CLOBOL_00126	120.0	1.39e-24	N/A	N/A
COG	UHGV-0054536_50	COG5283	N/A	N/A	Phage-related tail protein	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0054536	Yes	31,629	38	53	1
UHGV-1471563	No	30,560	37	51	1