Viral OTU vOTU-120404

vOTU: vOTU-120404

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-120404
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00146 → vGENUS-00447 → vOTU-120404
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0167900
Biosample ID	N/A
Length	29,862 bps
CheckV Completeness	84.69% (Medium-quality)
CDS Count	48
CDS Density	91.86%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 84.69)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0167900_1	phrog_11037	86.7	3.6e-25	N/A	unknown function
UniRef90	UHGV-0167900_1	UniRef90_A0A146K630	59.3	0.000000000753	Peptidoglycan-binding lysin domain containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0167900_1	1163671.JAGI01000001_gene44	105.0	6.77e-27	Putative peptidoglycan binding domain	N/A
Pfam	UHGV-0167900_1	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
COG	UHGV-0167900_1	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
PHROG	UHGV-0167900_2	phrog_13289	375.2	0	tail protein	tail
UniRef90	UHGV-0167900_2	UniRef90_A0A350VIV3	1132.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0167900_2	1235798.C817_02568	421.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0167900_2	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0167900_2	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0167900_2	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-0167900_2	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0167900_3	phrog_33	69.1	1.1e-19	distal tail protein Dit	tail
UniRef90	UHGV-0167900_3	UniRef90_A0A350VIV2	473.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0167900_3	1232452.BAIB02000007_gene1615	211.0	0	phage tail	N/A
COG	UHGV-0167900_3	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0167900_3	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0167900_4	K10421	50.8	0.000000000000013	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0167900_4	phrog_23464	191.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0167900_4	1232452.BAIB02000007_gene1616	410.0	0	phage tail tape measure protein	N/A
COG	UHGV-0167900_4	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0167900_6	phrog_88	107.4	1.2e-31	major tail protein	tail
UniRef90	UHGV-0167900_6	UniRef90_A0A1Q9J4Y1	276.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0167900_6	1487921.DP68_11355	54.3	0.0000021	phage major tail protein	N/A
NCBIFam	UHGV-0167900_6	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0167900_6	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0167900_6	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0167900_7	phrog_5	56.2	9.7e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-0167900_7	UniRef90_D4M595	168.0	0	Phage protein, HK97 gp10 family	N/A
NCBIFam	UHGV-0167900_7	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0167900_7	TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0167900_8	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-0167900_9	UniRef90_A0A844KCF4	191.0	0	Phage head closure protein	N/A
structural_annotation	UHGV-0167900_9	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0167900_11	phrog_10	76.3	3.5e-22	major head protein	head and packaging
UniRef90	UHGV-0167900_11	UniRef90_UPI00156F222D	636.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0167900_11	1232452.BAIB02000007_gene1625	485.0	0	Phage capsid family	N/A
Pfam	UHGV-0167900_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0167900_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0167900_11	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0167900_11	PF05065,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0167900_12	K01358	118.0	1e-34	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0167900_12	phrog_94	195.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0167900_12	UniRef90_A0A0M6WHX9	508.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0167900_12	1235792.C808_00085	211.0	0	Clp protease	N/A
Pfam	UHGV-0167900_12	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0167900_12	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0167900_12	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0167900_13	phrog_12	63.1	3.1e-18	portal protein	head and packaging
UniRef90	UHGV-0167900_13	UniRef90_UPI00156D5DC9	552.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0167900_13	1232452.BAIB02000007_gene1627	277.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0167900_13	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0167900_13	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0167900_13	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0167900_14	phrog_9	246.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0167900_14	UniRef90_D4M588	1021.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0167900_14	1232452.BAIB02000007_gene1629	526.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0167900_14	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0167900_14	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0167900_14	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0167900_14	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0167900_15	phrog_5110	95.8	2.9e-28	terminase small subunit	head and packaging
UniRef90	UHGV-0167900_15	UniRef90_A0A1C5LZF0	103.0	2.29e-26	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0167900_15	349161.Dred_2608	79.3	6.66e-18	N/A	N/A
Pfam	UHGV-0167900_15	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0167900_15	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0167900_17	phrog_36	57.1	3.9e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0167900_17	UniRef90_A0A7X9DAW2	53.9	0.00000179	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-0167900_17	755731.Clo1100_3798	60.8	0.000000000885	N/A	N/A
structural_annotation	UHGV-0167900_17	PF07374,MF_00674,NF001074	N/A	N/A	N/A	N/A
PHROG	UHGV-0167900_18	phrog_3584	238.7	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0167900_18	411902.CLOBOL_03891	384.0	0	N/A	N/A
structural_annotation	UHGV-0167900_18	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0167900_23	K22300	59.3	9.5e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0167900_23	phrog_8	66.7	4.6e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0167900_23	UniRef90_B7AR52	167.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0167900_23	483218.BACPEC_01162	167.0	0	sequence-specific DNA binding	N/A
Pfam	UHGV-0167900_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0167900_23	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0167900_23	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0167900_24	483218.BACPEC_01162	51.2	0.00000045	sequence-specific DNA binding	N/A
COG	UHGV-0167900_24	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0167900_26	phrog_21026	58.8	1.2e-16	N/A	unknown function
structural_annotation	UHGV-0167900_26	PF21744	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0167900_27	NF011508	N/A	N/A	N/A	N/A
PHROG	UHGV-0167900_29	phrog_15077	97.9	1e-29	N/A	unknown function
UniRef90	UHGV-0167900_29	UniRef90_UPI001D0741A0	201.0	0	N/A	N/A
eggNOG-mapper	UHGV-0167900_29	97139.C824_05986	345.0	0	N/A	N/A
structural_annotation	UHGV-0167900_29	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0167900_30	phrog_8470	348.3	0	N/A	unknown function
UniRef90	UHGV-0167900_30	UniRef90_UPI001D086F83	835.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0167900_30	1235792.C808_00066	900.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0167900_30	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0167900_30	PF14284	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0167900_31	1235792.C808_00065	243.0	0	N/A	N/A
UniRef90	UHGV-0167900_32	UniRef90_A0A417WAJ1	119.0	1.17e-32	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0167900_32	1235800.C819_02254	121.0	5.46e-34	HNH nucleases	N/A
structural_annotation	UHGV-0167900_35	PF18066,NF007780,COG1544	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0167900_37	PF09486,TIGR03090,COG5420	N/A	N/A	N/A	N/A
PHROG	UHGV-0167900_38	phrog_9607	105.6	4.9e-31	N/A	unknown function
eggNOG-mapper	UHGV-0167900_38	1304866.K413DRAFT_4639	112.0	5.46e-29	N/A	N/A
structural_annotation	UHGV-0167900_38	PF02883,MF_00791,NF012200,COG3354	N/A	N/A	N/A	N/A
KOfam	UHGV-0167900_42	K22300	45.6	0.0000000000015	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0167900_42	UniRef90_A0A2N5NUM8	93.6	1.12e-23	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0167900_42	1256908.HMPREF0373_00646	91.7	1.18e-23	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0167900_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0167900_42	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0167900_42	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0167900_43	K22300	59.1	9.6e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0167900_43	phrog_2967	66.2	5.9e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0167900_43	UniRef90_A0A7X5ITH0	101.0	4.29e-25	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0167900_43	1256908.HMPREF0373_00643	73.2	0.0000000000000119	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0167900_43	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0167900_43	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
KOfam	UHGV-0167900_44	K14623	347.5	0	dinD; DNA-damage-inducible protein D	N/A
PHROG	UHGV-0167900_44	phrog_8036	392.0	0	N/A	unknown function
UniRef90	UHGV-0167900_44	UniRef90_A0A6N2UQZ1	437.0	0	DNA-damage-inducible protein D	N/A
eggNOG-mapper	UHGV-0167900_44	665950.HMPREF1025_02565	421.0	0	N/A	N/A
AcrCatalog	UHGV-0167900_44	cluster_17589	151.0	1.4013e-45	NA	N/A
PADLOC	UHGV-0167900_44	Specificity_I_00032	325.7	0	Type I specificity subunit	RM
Pfam	UHGV-0167900_44	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
NCBIFam	UHGV-0167900_44	NF008573.0	N/A	N/A	DNA damage-inducible protein D	N/A
COG	UHGV-0167900_44	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0167900_44	PF09669,NF008573,COG3646	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0167900_45	1408311.JNJM01000007_gene933	152.0	1.16028e-42	N/A	N/A
Pfam	UHGV-0167900_45	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
KOfam	UHGV-0167900_47	K06400	320.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0167900_47	phrog_95	347.0	0	integrase	integration and excision
UniRef90	UHGV-0167900_47	UniRef90_B0NAW3	619.0	0	DNA-invertase hin	N/A
eggNOG-mapper	UHGV-0167900_47	411468.CLOSCI_00582	619.0	0	Recombinase	N/A
Pfam	UHGV-0167900_47	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0167900_47	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0167900_47	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0167900_47	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0167900_47	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0167900_48	UniRef90_R5QKX6	65.5	0.00000000000112	(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB	N/A
eggNOG-mapper	UHGV-0167900_48	1280698.AUJS01000002_gene2767	80.5	5.28e-17	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine	N/A
COG	UHGV-0167900_48	COG0621	N/A	N/A	tRNA A37 methylthiotransferase MiaB	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0167900	Yes	29,862	41	85	1