Viral OTU vOTU-123912

vOTU: vOTU-123912

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-123912
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00307 → vOTU-123912
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminiclostridium_E → Ruminiclostridium_E siraeum
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0085636
Biosample ID	SAMEA2737839
Length	37,283 bps
CheckV Completeness	81.58% (Medium-quality)
CDS Count	50
CDS Density	71.69%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 81.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0085636_3	UniRef90_R6RKJ1	154.0	2.8026e-45	LPD3 domain-containing protein	N/A
PHROG	UHGV-0085636_4	phrog_22978	83.4	8e-25	N/A	unknown function
UniRef90	UHGV-0085636_4	UniRef90_D4MLA0	154.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0085636_4	1519439.JPJG01000060_gene1905	100.0	5.14e-23	N/A	N/A
Pfam	UHGV-0085636_4	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
PHROG	UHGV-0085636_5	phrog_115	142.8	3.50044e-42	minor head protein	head and packaging
UniRef90	UHGV-0085636_5	UniRef90_D3AUG7	108.0	7.18e-25	Phage protein F-like protein	N/A
eggNOG-mapper	UHGV-0085636_5	1294142.CINTURNW_1685	127.0	4.54e-32	Phage Mu protein F like protein	N/A
Pfam	UHGV-0085636_5	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0085636_5	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0085636_5	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0085636_8	phrog_15528	105.4	4.7e-31	portal protein	head and packaging
UniRef90	UHGV-0085636_8	UniRef90_R6QTV7	129.0	2.75e-35	Phage-associated protein HI1409 family	N/A
eggNOG-mapper	UHGV-0085636_8	864563.HMPREF9166_1258	145.0	2.87e-38	N/A	N/A
COG	UHGV-0085636_8	COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0085636_9	phrog_6332	64.5	1.1e-18	N/A	unknown function
UniRef90	UHGV-0085636_9	UniRef90_A0A1B8WVX7	87.0	2.67e-21	Cys_rich_CPCC domain-containing protein	N/A
eggNOG-mapper	UHGV-0085636_9	575593.HMPREF0491_02249	70.5	0.00000000000000162	Cysteine-rich CPCC	N/A
Pfam	UHGV-0085636_9	PF14206	N/A	N/A	Cysteine-rich CPCC	Cys_rich_CPCC
structural_annotation	UHGV-0085636_9	PF14206	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0085636_12	742735.HMPREF9467_00526	59.7	0.000000244	N/A	N/A
Pfam	UHGV-0085636_12	PF08874	N/A	N/A	N/A	DUF1835
Pfam	UHGV-0085636_12	PF12395	N/A	N/A	N/A	DUF3658
PHROG	UHGV-0085636_17	phrog_581	92.1	8.5e-27	minor head protein	head and packaging
UniRef90	UHGV-0085636_17	UniRef90_A0A174Z3H5	434.0	0	NAD(+)--arginine ADP-ribosyltransferase EFV	N/A
eggNOG-mapper	UHGV-0085636_17	33035.JPJF01000093_gene2255	171.0	5.60519e-45	N/A	N/A
Pfam	UHGV-0085636_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0085636_17	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-0085636_17	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
KOfam	UHGV-0085636_20	K14059	224.7	0	int; integrase	N/A
PHROG	UHGV-0085636_20	phrog_1	210.1	0	integrase	integration and excision
UniRef90	UHGV-0085636_20	UniRef90_R6RJI6	736.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0085636_20	1232449.BAHV02000008_gene609	156.0	1.92006e-41	Site-specific recombinase, phage integrase family	N/A
Pfam	UHGV-0085636_20	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0085636_20	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0085636_20	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0085636_20	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0085636_22	K18843	63.4	4.8e-18	hicB; antitoxin HicB	N/A
PHROG	UHGV-0085636_22	phrog_497	84.3	2.1e-24	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0085636_22	UniRef90_R6R2V4	270.0	0	Toxin-antitoxin system antitoxin component HicB family	N/A
eggNOG-mapper	UHGV-0085636_22	1160721.RBI_I01717	191.0	0	HicB_like antitoxin of bacterial toxin-antitoxin system	N/A
Pfam	UHGV-0085636_22	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0085636_22	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0085636_22	PF15919,COG1598	N/A	N/A	N/A	N/A
KOfam	UHGV-0085636_23	K07339	56.3	5.3e-16	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-0085636_23	phrog_353	88.5	4e-26	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0085636_23	UniRef90_R6R5J3	129.0	2.38e-38	Toxin-antitoxin system toxin component HicA family	N/A
eggNOG-mapper	UHGV-0085636_23	626939.HMPREF9443_00527	92.0	4.04e-24	Toxin-antitoxin system, toxin component, HicA family	N/A
Pfam	UHGV-0085636_23	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
COG	UHGV-0085636_23	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
structural_annotation	UHGV-0085636_23	PF07927,COG1724	N/A	N/A	N/A	N/A
KOfam	UHGV-0085636_25	K01356	110.1	3.2e-32	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0085636_25	phrog_4	133.1	2.5e-39	transcriptional repressor	transcription regulation
UniRef90	UHGV-0085636_25	UniRef90_R6T2B0	298.0	0	Peptidase S24-like protein	N/A
eggNOG-mapper	UHGV-0085636_25	246199.CUS_5911	217.0	0	N/A	N/A
Pfam	UHGV-0085636_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0085636_25	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0085636_25	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0085636_25	PF00717,PF12844,MF_00015,TIGR00498,TIGR03070,COG1974,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0085636_26	UniRef90_R6TEQ2	112.0	4.35e-31	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0085636_26	246199.CUS_5910	112.0	3.61e-32	N/A	N/A
Pfam	UHGV-0085636_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0085636_26	PF21291,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0085636_27	UniRef90_R6S985	146.0	1.26117e-44	XRE family plasmid maintenance system antidote protein	N/A
eggNOG-mapper	UHGV-0085636_27	1430331.EP10_02425	55.1	0.00000000377	N/A	N/A
structural_annotation	UHGV-0085636_27	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0085636_28	phrog_5079	63.8	2.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0085636_28	1029718.SFBM_1171	52.0	0.0000000102	N/A	N/A
PHROG	UHGV-0085636_33	phrog_22695	69.5	6.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0085636_33	679201.HMPREF9334_00305	57.8	0.0000000317	N/A	N/A
PHROG	UHGV-0085636_35	phrog_69	312.6	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0085636_35	UniRef90_A0A2V2FS99	556.0	0	N/A	N/A
eggNOG-mapper	UHGV-0085636_35	1449126.JQKL01000006_gene838	399.0	0	N/A	N/A
Pfam	UHGV-0085636_35	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-0085636_35	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0085636_35	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0085636_37	phrog_112	165.5	0	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0085636_37	UniRef90_A0A2V2FV77	281.0	0	N/A	N/A
eggNOG-mapper	UHGV-0085636_37	1203606.HMPREF1526_00235	242.0	0	N/A	N/A
Pfam	UHGV-0085636_37	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
structural_annotation	UHGV-0085636_37	PF10991,MF_04153,NF005241	N/A	N/A	N/A	N/A
KOfam	UHGV-0085636_38	K02334	855.8	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-0085636_38	phrog_17	391.0	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0085636_38	UniRef90_A0A329UVL7	1020.0	0	POLAc domain-containing protein	N/A
eggNOG-mapper	UHGV-0085636_38	1203606.HMPREF1526_00239	944.0	0	DNA polymerase	N/A
Pfam	UHGV-0085636_38	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0085636_38	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0085636_38	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-0085636_39	phrog_256	994.3	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0085636_39	UniRef90_A0A2V2FYQ5	1244.0	0	Virulence-associated protein E	N/A
eggNOG-mapper	UHGV-0085636_39	1203606.HMPREF1526_00242	1086.0	0	virulence-associated E family protein	N/A
Pfam	UHGV-0085636_39	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0085636_39	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0085636_39	PF05272,MF_04000,NF005477,NF040562,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-0085636_40	phrog_93	61.2	1.7e-17	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0085636_40	UniRef90_A0A2V2FU35	101.0	3.99e-26	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0085636_40	1408303.JNJJ01000084_gene2552	88.6	8.83e-22	VRR_NUC	N/A
structural_annotation	UHGV-0085636_40	PF08774,NF002582	N/A	N/A	N/A	N/A
KOfam	UHGV-0085636_41	K14440	98.1	3.7e-29	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0085636_41	phrog_62	359.3	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0085636_41	UniRef90_A0A2V2FWS9	750.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-0085636_41	693746.OBV_01800	560.0	0	snf2 family	N/A
PADLOC	UHGV-0085636_41	DpdE_00010	76.5	3.4e-22	DpdE	DPD
Pfam	UHGV-0085636_41	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
COG	UHGV-0085636_41	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0085636_41	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0085636_43	phrog_36	53.1	0.0000000000000062	transcriptional regulator	transcription regulation
UniRef90	UHGV-0085636_43	UniRef90_A0A174ZYK6	241.0	0	Phage transcriptional regulator, RinA family	N/A
eggNOG-mapper	UHGV-0085636_43	875454.BAEW01000002_gene486	71.6	0.0000000000000309	N/A	N/A
structural_annotation	UHGV-0085636_43	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0085636_44	phrog_6988	132.0	2.2e-39	N/A	unknown function
UniRef90	UHGV-0085636_44	UniRef90_A0A1D2W481	160.0	0	Nuclease	N/A
eggNOG-mapper	UHGV-0085636_44	203119.Cthe_2456	158.0	0	N/A	N/A
PADLOC	UHGV-0085636_44	ThsB1_00002	50.0	0.000000000000091	TIR-like	Thoeris
Pfam	UHGV-0085636_44	PF08937	N/A	N/A	Thoeris protein ThsB, TIR-like domain	ThsB_TIR
structural_annotation	UHGV-0085636_44	PF08937,MF_03036,TIGR03646,COG0758	N/A	N/A	N/A	N/A
PHROG	UHGV-0085636_45	phrog_419	77.8	9.2e-25	N/A	unknown function
UniRef90	UHGV-0085636_45	UniRef90_UPI001E40EA70	102.0	2.28e-27	PGDYG domain-containing protein	N/A
eggNOG-mapper	UHGV-0085636_45	596323.HMPREF0554_0262	94.7	3.88e-25	N/A	N/A
structural_annotation	UHGV-0085636_45	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0085636_46	phrog_7395	85.9	3.9e-25	N/A	unknown function
UniRef90	UHGV-0085636_46	UniRef90_UPI00069FFA16	90.5	8.49e-20	N/A	N/A
eggNOG-mapper	UHGV-0085636_46	1168067.JAGP01000001_gene1216	70.5	0.000000000000381	N/A	N/A
Pfam	UHGV-0085636_46	PF14015	N/A	N/A	N/A	DUF4231
NCBIFam	UHGV-0085636_46	NF033634.1	N/A	N/A	SLATT domain-containing protein	N/A
KOfam	UHGV-0085636_47	K07474	88.4	1.6e-25	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0085636_47	phrog_51	85.6	1.5e-25	terminase small subunit	head and packaging
UniRef90	UHGV-0085636_47	UniRef90_A0A174ZU67	199.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0085636_47	1160721.RBI_II00483	114.0	6.61e-31	DNA packaging	N/A
Pfam	UHGV-0085636_47	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0085636_47	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0085636_47	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0085636_48	K06909	372.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0085636_48	phrog_3717	161.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0085636_48	UniRef90_A0A174ZXT9	856.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0085636_48	246194.CHY_1680	543.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-0085636_48	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0085636_48	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0085636_48	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0085636_48	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0085636_48	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0085636_49	phrog_64	412.9	0	portal protein	head and packaging
UniRef90	UHGV-0085636_49	UniRef90_A0A174ZZR5	898.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-0085636_49	1504823.CCMM01000008_gene1047	313.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0085636_49	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0085636_49	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0085636_49	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0085636_50	phrog_2841	130.3	1.7e-38	minor head protein	head and packaging
UniRef90	UHGV-0085636_50	UniRef90_C0D6Y0	134.0	3.4e-34	Phage protein F-like protein	N/A
eggNOG-mapper	UHGV-0085636_50	445974.CLORAM_02934	119.0	1.52e-28	Phage Mu protein F like protein	N/A
COG	UHGV-0085636_50	COG2369	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0085636	Yes	37,283	43	82	1