Viral OTU vOTU-124146

vOTU: vOTU-124146

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-124146
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00007 → vOTU-124146
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0028919
Biosample ID	SAMEA4765714
Length	42,035 bps
CheckV Completeness	72.89% (Medium-quality)
CDS Count	78
CDS Density	85.15%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 72.89)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-0028919_1	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
PHROG	UHGV-0028919_2	phrog_1863	74.5	7.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0028919_2	718252.FP2_04900	142.0	3.54529e-43	N/A	N/A
PHROG	UHGV-0028919_3	phrog_15303	85.0	6.5e-25	N/A	unknown function
PHROG	UHGV-0028919_4	phrog_918	99.5	1.6e-29	N/A	unknown function
UniRef90	UHGV-0028919_4	UniRef90_UPI000EC62F11	182.0	0	N/A	N/A
eggNOG-mapper	UHGV-0028919_4	411902.CLOBOL_05677	139.0	3.3407e-42	N/A	N/A
Pfam	UHGV-0028919_4	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0028919_4	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0028919_8	phrog_16490	105.6	4.9e-40	N/A	unknown function
eggNOG-mapper	UHGV-0028919_8	1408437.JNJN01000043_gene803	161.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-0028919_9	1408437.JNJN01000043_gene802	120.0	9.09e-34	N/A	N/A
eggNOG-mapper	UHGV-0028919_10	1378168.N510_03079	95.1	6.4e-21	N/A	N/A
PHROG	UHGV-0028919_11	phrog_25037	54.0	0.000000000000002	N/A	unknown function
KOfam	UHGV-0028919_12	K07741	44.6	0.000000000004	antB; anti-repressor protein	N/A
PHROG	UHGV-0028919_12	phrog_63	137.5	9.10003e-41	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0028919_12	UniRef90_A0A1M6WPL7	198.0	0	Phage regulatory protein, rha family	N/A
eggNOG-mapper	UHGV-0028919_12	947981.E9LUT0_9CAUD	161.0	1.4013e-45	DNA binding	N/A
Pfam	UHGV-0028919_12	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0028919_12	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-0028919_12	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
eggNOG-mapper	UHGV-0028919_13	658655.HMPREF0988_02544	93.6	8.8e-25	N/A	N/A
structural_annotation	UHGV-0028919_13	PF01402,COG4710	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028919_14	PF07878	N/A	N/A	N/A	N/A
Pfam	UHGV-0028919_15	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0028919_15	NF041588	N/A	N/A	N/A	N/A
KOfam	UHGV-0028919_16	K03496	238.2	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0028919_16	phrog_164	169.6	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028919_16	UniRef90_A0A1C6BS15	204.0	0	Sporulation initiation inhibitor protein soj	N/A
eggNOG-mapper	UHGV-0028919_16	1408423.JHYA01000021_gene392	195.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-0028919_16	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0028919_16	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0028919_16	PF13614,MF_00533,NF010443,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0028919_17	phrog_4402	99.6	2.9e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028919_17	UniRef90_A0A0H5Q331	293.0	0	Rep_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0028919_17	999413.HMPREF1094_04438	125.0	3.66e-30	Initiator Replication protein	N/A
Pfam	UHGV-0028919_17	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-0028919_17	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-0028919_17	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-0028919_17	PF01051,PF21205,NF038290,COG5527	N/A	N/A	N/A	N/A
UniRef90	UHGV-0028919_18	UniRef90_A0A2A7AM70	219.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0028919_18	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0028919_18	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0028919_22	phrog_8	54.3	0.0000000000000032	transcriptional regulator	transcription regulation
UniRef90	UHGV-0028919_22	UniRef90_A0A373XY93	93.6	2.36e-22	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0028919_22	665956.HMPREF1032_02614	65.5	0.00000000000306	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0028919_22	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0028919_22	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0028919_23	UniRef90_A0A7X1LWA7	80.5	2.17e-18	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0028919_23	428125.CLOLEP_02737	59.7	0.0000000000581	N/A	N/A
structural_annotation	UHGV-0028919_23	TIGR03070	N/A	N/A	N/A	N/A
KOfam	UHGV-0028919_24	K07741	121.2	1.9e-35	antB; anti-repressor protein	N/A
PHROG	UHGV-0028919_24	phrog_130	267.3	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0028919_24	UniRef90_R5ANG2	305.0	0	Phage antirepressor protein	N/A
eggNOG-mapper	UHGV-0028919_24	1589751.A0A0C5AEJ9_9CAUD	279.0	0	DNA binding	N/A
Pfam	UHGV-0028919_24	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0028919_24	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-0028919_24	PF03374,PF02498,TIGR02681,COG3645	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028919_25	PF10922	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028919_26	TIGR03826	N/A	N/A	N/A	N/A
Pfam	UHGV-0028919_28	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0028919_28	PF13443,TIGR02684,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028919_29	PF14143	N/A	N/A	N/A	N/A
KOfam	UHGV-0028919_30	K07738	42.8	0.0000000000084	nrdR; transcriptional repressor NrdR	N/A
eggNOG-mapper	UHGV-0028919_30	870187.Thini_0915	50.1	0.00000143	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes	N/A
Pfam	UHGV-0028919_30	PF01096	N/A	N/A	Transcription factor S-II (TFIIS)	TFIIS_C
COG	UHGV-0028919_30	COG1327	N/A	N/A	Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains	N/A
structural_annotation	UHGV-0028919_30	PF04606,NF007241	N/A	N/A	N/A	N/A
PHROG	UHGV-0028919_32	phrog_155	150.9	7.00649e-45	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028919_32	UniRef90_E2ZNS9	308.0	0	Erf family protein	N/A
eggNOG-mapper	UHGV-0028919_32	748224.HMPREF9436_03360	308.0	0	ERF superfamily	N/A
Pfam	UHGV-0028919_32	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0028919_32	PF04404,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-0028919_33	K03111	113.9	2.4e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0028919_33	phrog_44	122.4	4e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028919_33	UniRef90_A0A6N7TNV3	152.0	7.00649e-45	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0028919_33	748224.HMPREF9436_03359	148.0	7.42688e-44	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0028919_33	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0028919_33	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0028919_33	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0028919_33	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0028919_33	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0028919_34	phrog_28936	132.9	1.9e-39	N/A	unknown function
eggNOG-mapper	UHGV-0028919_34	573061.Clocel_3563	124.0	3.38e-33	N/A	N/A
structural_annotation	UHGV-0028919_34	PF11645,MF_01490,NF040854	N/A	N/A	N/A	N/A
PHROG	UHGV-0028919_35	phrog_59	135.2	2.2e-40	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028919_35	UniRef90_UPI0018DE920E	108.0	4.74e-26	NUMOD4 motif-containing HNH endonuclease	N/A
eggNOG-mapper	UHGV-0028919_35	1434319.W5RV07_9CAUD	98.6	3.86e-23	HNH endonuclease	N/A
PADLOC	UHGV-0028919_35	HEase_00016	61.0	1.9e-17	homing endonuclease	RM
Pfam	UHGV-0028919_35	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0028919_35	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0028919_35	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0028919_37	phrog_14682	92.4	3.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-0028919_37	457424.BFAG_02409	119.0	2.68e-34	N/A	N/A
PHROG	UHGV-0028919_39	phrog_843	63.8	2e-18	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028919_39	UniRef90_UPI001159D907	118.0	1.72e-30	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-0028919_39	929506.CbC4_1203	107.0	4.16e-27	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
structural_annotation	UHGV-0028919_39	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028919_41	PF11998,COG5420	N/A	N/A	N/A	N/A
KOfam	UHGV-0028919_43	K00390	114.1	1.2e-33	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0028919_43	phrog_424	126.9	1.3e-37	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0028919_43	UniRef90_A0A1Y4LU27	384.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-0028919_43	1408437.JNJN01000032_gene2312	342.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0028919_43	BrxP_00001	78.4	2.3e-24	BrxP	BREX
Pfam	UHGV-0028919_43	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0028919_43	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0028919_43	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
UniRef90	UHGV-0028919_46	UniRef90_A0A2V2F8Z8	81.3	8.35e-19	N/A	N/A
Pfam	UHGV-0028919_46	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0028919_46	NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028919_47	PF16677	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028919_48	PF20331,COG5264	N/A	N/A	N/A	N/A
UniRef90	UHGV-0028919_52	UniRef90_UPI0012DD33A2	300.0	0	restriction endonuclease subunit M	N/A
eggNOG-mapper	UHGV-0028919_52	596329.HMPREF0631_0252	213.0	0	restriction endonuclease	N/A
PADLOC	UHGV-0028919_52	MTase_II_00176	158.9	0	Type II methyltransferase	RM
COG	UHGV-0028919_52	COG1002	N/A	N/A	Type II restriction/modification system, endonuclease and methylase domains	N/A
KOfam	UHGV-0028919_56	K22300	40.3	0.000000000055	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0028919_56	phrog_11947	59.5	4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0028919_56	999413.HMPREF1094_00565	50.4	0.00001	Helix-turn-helix domain	N/A
Pfam	UHGV-0028919_56	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0028919_56	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0028919_56	PF01381,MF_00535,TIGR03070,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-0028919_59	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0028919_59	PF14354,TIGR03655,COG3478	N/A	N/A	N/A	N/A
PHROG	UHGV-0028919_60	phrog_15768	115.2	9.7e-35	N/A	unknown function
UniRef90	UHGV-0028919_60	UniRef90_A0A6N7WKT0	97.8	1.84e-21	N/A	N/A
eggNOG-mapper	UHGV-0028919_60	748224.HMPREF9436_03357	97.4	6.41e-22	N/A	N/A
Pfam	UHGV-0028919_60	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0028919_60	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0028919_61	K02314	207.4	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0028919_61	phrog_19	220.6	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028919_61	UniRef90_UPI001CBC4B63	426.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0028919_61	1203606.HMPREF1526_01325	163.0	8.1976e-43	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0028919_61	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0028919_61	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0028919_61	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0028919_63	phrog_1709	58.3	1.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0028919_63	500632.CLONEX_01053	85.5	1.25e-20	N/A	N/A
PHROG	UHGV-0028919_65	phrog_434	42.4	0.000000000011	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-0028919_69	PF03843,TIGR00752,COG3065	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028919_70	PF11906,PF09624,MF_00791,NF038353,NF033903,COG5633	N/A	N/A	N/A	N/A
KOfam	UHGV-0028919_72	K07741	89.1	7.2e-26	antB; anti-repressor protein	N/A
PHROG	UHGV-0028919_72	phrog_373	136.1	2.8e-40	anti-repressor	transcription regulation
UniRef90	UHGV-0028919_72	UniRef90_UPI001C039A6C	173.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0028919_72	1567013.A0A0A7RVQ9_9CAUD	148.0	2.73001e-41	AntA/AntB antirepressor	N/A
Pfam	UHGV-0028919_72	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0028919_72	PF10552	N/A	N/A	ORF6C domain	ORF6C
structural_annotation	UHGV-0028919_72	PF10552,PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028919_73	PF19807,NF041793,COG4877	N/A	N/A	N/A	N/A
KOfam	UHGV-0028919_75	K21528	146.0	1.59748e-43	gin; serine recombinase [EC:3.1.22.- 6.5.1.-]	N/A
PHROG	UHGV-0028919_75	phrog_125	196.2	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028919_75	UniRef90_A0A1H3G7A1	239.0	0	Site-specific DNA recombinase	N/A
eggNOG-mapper	UHGV-0028919_75	931626.Awo_c01430	232.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0028919_75	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0028919_75	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0028919_75	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0028919_77	K14415	324.7	0	RTCB, rtcB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]	N/A
PHROG	UHGV-0028919_77	phrog_1075	438.9	0	tRNA splicing ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028919_77	UniRef90_UPI00067F3ABF	476.0	0	RNA-splicing ligase RtcB	N/A
eggNOG-mapper	UHGV-0028919_77	1211844.CBLM010000044_gene358	472.0	0	tRNA-splicing ligase RtcB	N/A
Pfam	UHGV-0028919_77	PF01139	N/A	N/A	tRNA-splicing ligase RtcB	RtcB
COG	UHGV-0028919_77	COG1690	N/A	N/A	RNA-splicing ligase RtcB, repairs tRNA damage	N/A
structural_annotation	UHGV-0028919_77	PF01139,MF_03144,NF007153,COG1690	N/A	N/A	N/A	N/A
PHROG	UHGV-0028919_78	phrog_38	189.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0028919_78	UniRef90_A0A810QA10	492.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0028919_78	1298920.KI911353_gene2682	341.0	0	TIGRFAM Phage	N/A
COG	UHGV-0028919_78	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028919_78	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0028919	Yes	42,035	48	73	1